data_3I5G # _model_server_result.job_id e5wMvAqS1K85y_4Ksl_96g _model_server_result.datetime_utc '2024-12-26 21:33:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i5g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 3I5G # _exptl.entry_id 3I5G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.74 _cell.angle_gamma 90 _cell.entry_id 3I5G _cell.length_a 194.138 _cell.length_b 101.751 _cell.length_c 80.651 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I5G _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O ASP 19 C ASP 19 1_555 E CA CA . C CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc2 C OD1 ASP 22 C ASP 22 1_555 E CA CA . C CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc3 C O GLY 23 C GLY 23 1_555 E CA CA . C CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc4 C OD1 ASP 25 C ASP 25 1_555 E CA CA . C CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc5 C O ASP 27 C ASP 27 1_555 E CA CA . C CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3I5G _atom_sites.fract_transf_matrix[1][1] 0.005151 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001452 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MLI A 1 1001 1001 MLI MLI . E 5 CA C 1 1001 1001 CA CA . F 6 HOH A 1 1002 1002 HOH HOH . F 6 HOH A 2 1010 1010 HOH HOH . F 6 HOH A 3 1031 1031 HOH HOH . F 6 HOH A 4 1032 1032 HOH HOH . F 6 HOH A 5 1033 1033 HOH HOH . F 6 HOH A 6 1034 1034 HOH HOH . F 6 HOH A 7 1035 1035 HOH HOH . F 6 HOH A 8 1036 1036 HOH HOH . F 6 HOH A 9 1037 1037 HOH HOH . F 6 HOH A 10 1038 1038 HOH HOH . F 6 HOH A 11 1039 1039 HOH HOH . F 6 HOH A 12 1040 1040 HOH HOH . F 6 HOH A 13 1041 1041 HOH HOH . F 6 HOH A 14 1042 1042 HOH HOH . F 6 HOH A 15 1043 1043 HOH HOH . F 6 HOH A 16 1044 1044 HOH HOH . F 6 HOH A 17 1045 1045 HOH HOH . F 6 HOH A 18 1046 1046 HOH HOH . F 6 HOH A 19 1047 1047 HOH HOH . F 6 HOH A 20 1048 1048 HOH HOH . F 6 HOH A 21 1049 1049 HOH HOH . F 6 HOH A 22 1050 1050 HOH HOH . F 6 HOH A 23 1051 1051 HOH HOH . F 6 HOH A 24 1052 1052 HOH HOH . F 6 HOH A 25 1053 1053 HOH HOH . F 6 HOH A 26 1054 1054 HOH HOH . F 6 HOH A 27 1055 1055 HOH HOH . F 6 HOH A 28 1056 1056 HOH HOH . F 6 HOH A 29 1057 1057 HOH HOH . F 6 HOH A 30 1058 1058 HOH HOH . F 6 HOH A 31 1059 1059 HOH HOH . F 6 HOH A 32 1060 1060 HOH HOH . F 6 HOH A 33 1062 1062 HOH HOH . F 6 HOH A 34 1063 1063 HOH HOH . F 6 HOH A 35 1064 1064 HOH HOH . F 6 HOH A 36 1065 1065 HOH HOH . F 6 HOH A 37 1066 1066 HOH HOH . F 6 HOH A 38 1067 1067 HOH HOH . F 6 HOH A 39 1068 1068 HOH HOH . F 6 HOH A 40 1069 1069 HOH HOH . F 6 HOH A 41 1070 1070 HOH HOH . F 6 HOH A 42 1071 1071 HOH HOH . F 6 HOH A 43 1072 1072 HOH HOH . F 6 HOH A 44 1073 1073 HOH HOH . F 6 HOH A 45 1074 1074 HOH HOH . F 6 HOH A 46 1075 1075 HOH HOH . F 6 HOH A 47 1076 1076 HOH HOH . F 6 HOH A 48 1077 1077 HOH HOH . F 6 HOH A 49 1078 1078 HOH HOH . F 6 HOH A 50 1079 1079 HOH HOH . F 6 HOH A 51 1080 1080 HOH HOH . G 6 HOH C 1 1003 1003 HOH HOH . G 6 HOH C 2 1004 1004 HOH HOH . G 6 HOH C 3 1005 1005 HOH HOH . G 6 HOH C 4 1006 1006 HOH HOH . G 6 HOH C 5 1007 1007 HOH HOH . G 6 HOH C 6 1008 1008 HOH HOH . G 6 HOH C 7 1009 1009 HOH HOH . G 6 HOH C 8 1011 1011 HOH HOH . G 6 HOH C 9 1012 1012 HOH HOH . G 6 HOH C 10 1013 1013 HOH HOH . G 6 HOH C 11 1014 1014 HOH HOH . G 6 HOH C 12 1015 1015 HOH HOH . G 6 HOH C 13 1016 1016 HOH HOH . G 6 HOH C 14 1017 1017 HOH HOH . G 6 HOH C 15 1018 1018 HOH HOH . G 6 HOH C 16 1019 1019 HOH HOH . G 6 HOH C 17 1020 1020 HOH HOH . G 6 HOH C 18 1021 1021 HOH HOH . G 6 HOH C 19 1022 1022 HOH HOH . G 6 HOH C 20 1023 1023 HOH HOH . G 6 HOH C 21 1024 1024 HOH HOH . G 6 HOH C 22 1025 1025 HOH HOH . G 6 HOH C 23 1026 1026 HOH HOH . G 6 HOH C 24 1027 1027 HOH HOH . G 6 HOH C 25 1028 1028 HOH HOH . G 6 HOH C 26 1029 1029 HOH HOH . G 6 HOH C 27 1030 1030 HOH HOH . G 6 HOH C 28 1061 1061 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -13.234 _atom_site.Cartn_y -5.525 _atom_site.Cartn_z 24.239 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #