data_3I65 # _model_server_result.job_id K31X85Xj4TIR87Aj9w8Tcw _model_server_result.datetime_utc '2024-11-25 16:22:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i65 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1004}' # _entry.id 3I65 # _exptl.entry_id 3I65 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3I65 _cell.length_a 85.858 _cell.length_b 85.858 _cell.length_c 138.352 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I65 _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 266 n n N1 CM1 LDA sing 267 n n N1 CM2 LDA sing 268 n n N1 C1 LDA sing 269 n n CM1 HM11 LDA sing 270 n n CM1 HM12 LDA sing 271 n n CM1 HM13 LDA sing 272 n n CM2 HM21 LDA sing 273 n n CM2 HM22 LDA sing 274 n n CM2 HM23 LDA sing 275 n n C1 C2 LDA sing 276 n n C1 H11 LDA sing 277 n n C1 H12 LDA sing 278 n n C2 C3 LDA sing 279 n n C2 H21 LDA sing 280 n n C2 H22 LDA sing 281 n n C3 C4 LDA sing 282 n n C3 H31 LDA sing 283 n n C3 H32 LDA sing 284 n n C4 C5 LDA sing 285 n n C4 H41 LDA sing 286 n n C4 H42 LDA sing 287 n n C5 C6 LDA sing 288 n n C5 H51 LDA sing 289 n n C5 H52 LDA sing 290 n n C6 C7 LDA sing 291 n n C6 H61 LDA sing 292 n n C6 H62 LDA sing 293 n n C7 C8 LDA sing 294 n n C7 H71 LDA sing 295 n n C7 H72 LDA sing 296 n n C8 C9 LDA sing 297 n n C8 H81 LDA sing 298 n n C8 H82 LDA sing 299 n n C9 C10 LDA sing 300 n n C9 H91 LDA sing 301 n n C9 H92 LDA sing 302 n n C10 C11 LDA sing 303 n n C10 H101 LDA sing 304 n n C10 H102 LDA sing 305 n n C11 C12 LDA sing 306 n n C11 H111 LDA sing 307 n n C11 H112 LDA sing 308 n n C12 H121 LDA sing 309 n n C12 H122 LDA sing 310 n n C12 H123 LDA sing 311 n n # _atom_sites.entry_id 3I65 _atom_sites.fract_transf_matrix[1][1] 0.011647 _atom_sites.fract_transf_matrix[1][2] 0.006724 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007228 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JZ8 A 1 1001 1001 JZ8 JZ8 . C 3 FMN A 1 1002 1002 FMN FMN . D 4 ORO A 1 1003 1003 ORO ORO . E 5 LDA A 1 1004 1004 LDA LDA . F 6 HOH A 1 1 1 HOH HOH . F 6 HOH A 2 2 2 HOH HOH . F 6 HOH A 3 3 3 HOH HOH . F 6 HOH A 4 4 4 HOH HOH . F 6 HOH A 5 5 5 HOH HOH . F 6 HOH A 6 6 6 HOH HOH . F 6 HOH A 7 7 7 HOH HOH . F 6 HOH A 8 8 8 HOH HOH . F 6 HOH A 9 9 9 HOH HOH . F 6 HOH A 10 10 10 HOH HOH . F 6 HOH A 11 11 11 HOH HOH . F 6 HOH A 12 12 12 HOH HOH . F 6 HOH A 13 13 13 HOH HOH . F 6 HOH A 14 14 14 HOH HOH . F 6 HOH A 15 15 15 HOH HOH . F 6 HOH A 16 16 16 HOH HOH . F 6 HOH A 17 17 17 HOH HOH . F 6 HOH A 18 18 18 HOH HOH . F 6 HOH A 19 19 19 HOH HOH . F 6 HOH A 20 20 20 HOH HOH . F 6 HOH A 21 21 21 HOH HOH . F 6 HOH A 22 22 22 HOH HOH . F 6 HOH A 23 23 23 HOH HOH . F 6 HOH A 24 24 24 HOH HOH . F 6 HOH A 25 25 25 HOH HOH . F 6 HOH A 26 26 26 HOH HOH . F 6 HOH A 27 27 27 HOH HOH . F 6 HOH A 28 28 28 HOH HOH . F 6 HOH A 29 29 29 HOH HOH . F 6 HOH A 30 30 30 HOH HOH . F 6 HOH A 31 31 31 HOH HOH . F 6 HOH A 32 32 32 HOH HOH . F 6 HOH A 33 33 33 HOH HOH . F 6 HOH A 34 34 34 HOH HOH . F 6 HOH A 35 35 35 HOH HOH . F 6 HOH A 36 36 36 HOH HOH . F 6 HOH A 37 37 37 HOH HOH . F 6 HOH A 38 38 38 HOH HOH . F 6 HOH A 39 39 39 HOH HOH . F 6 HOH A 40 40 40 HOH HOH . F 6 HOH A 41 41 41 HOH HOH . F 6 HOH A 42 42 42 HOH HOH . F 6 HOH A 43 43 43 HOH HOH . F 6 HOH A 44 44 44 HOH HOH . F 6 HOH A 45 45 45 HOH HOH . F 6 HOH A 46 46 46 HOH HOH . F 6 HOH A 47 47 47 HOH HOH . F 6 HOH A 48 48 48 HOH HOH . F 6 HOH A 49 49 49 HOH HOH . F 6 HOH A 50 50 50 HOH HOH . F 6 HOH A 51 51 51 HOH HOH . F 6 HOH A 52 52 52 HOH HOH . F 6 HOH A 53 53 53 HOH HOH . F 6 HOH A 54 54 54 HOH HOH . F 6 HOH A 55 55 55 HOH HOH . F 6 HOH A 56 56 56 HOH HOH . F 6 HOH A 57 57 57 HOH HOH . F 6 HOH A 58 58 58 HOH HOH . F 6 HOH A 59 59 59 HOH HOH . F 6 HOH A 60 60 60 HOH HOH . F 6 HOH A 61 61 61 HOH HOH . F 6 HOH A 62 62 62 HOH HOH . F 6 HOH A 63 63 63 HOH HOH . F 6 HOH A 64 64 64 HOH HOH . F 6 HOH A 65 65 65 HOH HOH . F 6 HOH A 66 66 66 HOH HOH . F 6 HOH A 67 67 67 HOH HOH . F 6 HOH A 68 68 68 HOH HOH . F 6 HOH A 69 69 69 HOH HOH . F 6 HOH A 70 70 70 HOH HOH . F 6 HOH A 71 71 71 HOH HOH . F 6 HOH A 72 72 72 HOH HOH . F 6 HOH A 73 73 73 HOH HOH . F 6 HOH A 74 74 74 HOH HOH . F 6 HOH A 75 75 75 HOH HOH . F 6 HOH A 76 76 76 HOH HOH . F 6 HOH A 77 77 77 HOH HOH . F 6 HOH A 78 78 78 HOH HOH . F 6 HOH A 79 79 79 HOH HOH . F 6 HOH A 80 80 80 HOH HOH . F 6 HOH A 81 81 81 HOH HOH . F 6 HOH A 82 82 82 HOH HOH . F 6 HOH A 83 83 83 HOH HOH . F 6 HOH A 84 84 84 HOH HOH . F 6 HOH A 85 85 85 HOH HOH . F 6 HOH A 86 86 86 HOH HOH . F 6 HOH A 87 87 87 HOH HOH . F 6 HOH A 88 88 88 HOH HOH . F 6 HOH A 89 89 89 HOH HOH . F 6 HOH A 90 90 90 HOH HOH . F 6 HOH A 91 91 91 HOH HOH . F 6 HOH A 92 92 92 HOH HOH . F 6 HOH A 93 93 93 HOH HOH . F 6 HOH A 94 94 94 HOH HOH . F 6 HOH A 95 95 95 HOH HOH . F 6 HOH A 96 96 96 HOH HOH . F 6 HOH A 97 97 97 HOH HOH . F 6 HOH A 98 98 98 HOH HOH . F 6 HOH A 99 99 99 HOH HOH . F 6 HOH A 100 100 100 HOH HOH . F 6 HOH A 101 101 101 HOH HOH . F 6 HOH A 102 102 102 HOH HOH . F 6 HOH A 103 103 103 HOH HOH . F 6 HOH A 104 104 104 HOH HOH . F 6 HOH A 105 105 105 HOH HOH . F 6 HOH A 106 106 106 HOH HOH . F 6 HOH A 107 107 107 HOH HOH . F 6 HOH A 108 108 108 HOH HOH . F 6 HOH A 109 109 109 HOH HOH . F 6 HOH A 110 110 110 HOH HOH . F 6 HOH A 111 111 111 HOH HOH . F 6 HOH A 112 112 112 HOH HOH . F 6 HOH A 113 113 113 HOH HOH . F 6 HOH A 114 114 114 HOH HOH . F 6 HOH A 115 115 115 HOH HOH . F 6 HOH A 116 116 116 HOH HOH . F 6 HOH A 117 117 117 HOH HOH . F 6 HOH A 118 118 118 HOH HOH . F 6 HOH A 119 119 119 HOH HOH . F 6 HOH A 120 120 120 HOH HOH . F 6 HOH A 121 121 121 HOH HOH . F 6 HOH A 122 122 122 HOH HOH . F 6 HOH A 123 123 123 HOH HOH . F 6 HOH A 124 124 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . E 5 -16.864 14.825 -22.468 1 45.19 ? N1 LDA 1004 A 1 HETATM 2 O O1 LDA . . . E 5 -16.703 13.655 -22.029 1 42.27 ? O1 LDA 1004 A 1 HETATM 3 C CM1 LDA . . . E 5 -15.716 15.637 -22.076 1 45.84 ? CM1 LDA 1004 A 1 HETATM 4 C CM2 LDA . . . E 5 -16.826 14.753 -23.938 1 48.28 ? CM2 LDA 1004 A 1 HETATM 5 C C1 LDA . . . E 5 -18.123 15.462 -22.037 1 43.25 ? C1 LDA 1004 A 1 HETATM 6 C C2 LDA . . . E 5 -17.853 16.982 -21.963 1 43.98 ? C2 LDA 1004 A 1 HETATM 7 C C3 LDA . . . E 5 -18.957 17.768 -21.278 1 44.19 ? C3 LDA 1004 A 1 HETATM 8 C C4 LDA . . . E 5 -19.288 19.084 -21.995 1 50.17 ? C4 LDA 1004 A 1 HETATM 9 C C5 LDA . . . E 5 -20.518 18.999 -22.908 1 50.7 ? C5 LDA 1004 A 1 HETATM 10 C C6 LDA . . . E 5 -21.758 19.702 -22.345 1 54.89 ? C6 LDA 1004 A 1 HETATM 11 C C7 LDA . . . E 5 -22.874 19.838 -23.386 1 56.31 ? C7 LDA 1004 A 1 HETATM 12 C C8 LDA . . . E 5 -23.656 21.133 -23.144 1 59.18 ? C8 LDA 1004 A 1 HETATM 13 C C9 LDA . . . E 5 -23.607 22.08 -24.342 1 58.4 ? C9 LDA 1004 A 1 HETATM 14 C C10 LDA . . . E 5 -23.008 23.45 -24.048 1 58.63 ? C10 LDA 1004 A 1 HETATM 15 C C11 LDA . . . E 5 -24.106 24.511 -24.034 1 59.62 ? C11 LDA 1004 A 1 HETATM 16 C C12 LDA . . . E 5 -23.718 25.771 -24.792 1 59.24 ? C12 LDA 1004 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #