data_3I6D
#
_model_server_result.job_id            kkzup4cRURR8jOZBlnu25A 
_model_server_result.datetime_utc      '2024-12-26 14:46:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3i6d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":700}' 
#
_entry.id    3I6D 
#
_exptl.entry_id    3I6D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3I6D 
_cell.length_a            96.175 
_cell.length_b            96.175 
_cell.length_c            299.823 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3I6D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,I 1 1 
B,F,G,H,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 115 n n 
PA O2A FAD sing 116 n n 
PA O5B FAD sing 117 n n 
PA O3P FAD sing 118 n n 
O2A HOA2 FAD sing 119 n n 
O5B C5B FAD sing 120 n n 
C5B C4B FAD sing 121 n n 
C5B H51A FAD sing 122 n n 
C5B H52A FAD sing 123 n n 
C4B O4B FAD sing 124 n n 
C4B C3B FAD sing 125 n n 
C4B H4B FAD sing 126 n n 
O4B C1B FAD sing 127 n n 
C3B O3B FAD sing 128 n n 
C3B C2B FAD sing 129 n n 
C3B H3B FAD sing 130 n n 
O3B HO3A FAD sing 131 n n 
C2B O2B FAD sing 132 n n 
C2B C1B FAD sing 133 n n 
C2B H2B FAD sing 134 n n 
O2B HO2A FAD sing 135 n n 
C1B N9A FAD sing 136 n n 
C1B H1B FAD sing 137 n n 
N9A C8A FAD sing 138 n y 
N9A C4A FAD sing 139 n y 
C8A N7A FAD doub 140 n y 
C8A H8A FAD sing 141 n n 
N7A C5A FAD sing 142 n y 
C5A C6A FAD sing 143 n y 
C5A C4A FAD doub 144 n y 
C6A N6A FAD sing 145 n n 
C6A N1A FAD doub 146 n y 
N6A H61A FAD sing 147 n n 
N6A H62A FAD sing 148 n n 
N1A C2A FAD sing 149 n y 
C2A N3A FAD doub 150 n y 
C2A H2A FAD sing 151 n n 
N3A C4A FAD sing 152 n y 
N1 C2 FAD sing 153 n n 
N1 C10 FAD doub 154 n n 
C2 O2 FAD doub 155 n n 
C2 N3 FAD sing 156 n n 
N3 C4 FAD sing 157 n n 
N3 HN3 FAD sing 158 n n 
C4 O4 FAD doub 159 n n 
C4 C4X FAD sing 160 n n 
C4X N5 FAD doub 161 n n 
C4X C10 FAD sing 162 n n 
N5 C5X FAD sing 163 n n 
C5X C6 FAD doub 164 n y 
C5X C9A FAD sing 165 n y 
C6 C7 FAD sing 166 n y 
C6 H6 FAD sing 167 n n 
C7 C7M FAD sing 168 n n 
C7 C8 FAD doub 169 n y 
C7M HM71 FAD sing 170 n n 
C7M HM72 FAD sing 171 n n 
C7M HM73 FAD sing 172 n n 
C8 C8M FAD sing 173 n n 
C8 C9 FAD sing 174 n y 
C8M HM81 FAD sing 175 n n 
C8M HM82 FAD sing 176 n n 
C8M HM83 FAD sing 177 n n 
C9 C9A FAD doub 178 n y 
C9 H9 FAD sing 179 n n 
C9A N10 FAD sing 180 n n 
N10 C10 FAD sing 181 n n 
N10 C1' FAD sing 182 n n 
C1' C2' FAD sing 183 n n 
C1' "H1'1" FAD sing 184 n n 
C1' "H1'2" FAD sing 185 n n 
C2' O2' FAD sing 186 n n 
C2' C3' FAD sing 187 n n 
C2' H2' FAD sing 188 n n 
O2' HO2' FAD sing 189 n n 
C3' O3' FAD sing 190 n n 
C3' C4' FAD sing 191 n n 
C3' H3' FAD sing 192 n n 
O3' HO3' FAD sing 193 n n 
C4' O4' FAD sing 194 n n 
C4' C5' FAD sing 195 n n 
C4' H4' FAD sing 196 n n 
O4' HO4' FAD sing 197 n n 
C5' O5' FAD sing 198 n n 
C5' "H5'1" FAD sing 199 n n 
C5' "H5'2" FAD sing 200 n n 
O5' P FAD sing 201 n n 
P O1P FAD doub 202 n n 
P O2P FAD sing 203 n n 
P O3P FAD sing 204 n n 
O2P HOP2 FAD sing 205 n n 
#
_atom_sites.entry_id                     3I6D 
_atom_sites.fract_transf_matrix[1][1]    0.010398 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010398 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 600 600 FAD FAD . 
D 3 ACJ A 1 471 100 ACJ ACJ . 
E 4 PO4 A 1 472 1 PO4 PO4 . 
F 2 FAD B 1 700 700 FAD FAD . 
G 3 ACJ B 1 471 200 ACJ ACJ . 
H 4 PO4 B 1 472 8 PO4 PO4 . 
I 5 HOH A 1 473 1 HOH HOH . 
I 5 HOH A 2 474 3 HOH HOH . 
I 5 HOH A 3 475 4 HOH HOH . 
I 5 HOH A 4 476 5 HOH HOH . 
I 5 HOH A 5 477 6 HOH HOH . 
J 5 HOH B 1 473 7 HOH HOH . 
J 5 HOH B 2 474 9 HOH HOH . 
J 5 HOH B 3 475 10 HOH HOH . 
J 5 HOH B 4 476 11 HOH HOH . 
J 5 HOH B 5 477 12 HOH HOH . 
J 5 HOH B 6 478 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 2 36.656 -32.119 31.454 1 61.82 ? PA FAD 700 B 1 
HETATM 2 O O1A FAD . . . F 2 36.004 -31.121 30.594 1 60.78 ? O1A FAD 700 B 1 
HETATM 3 O O2A FAD . . . F 2 36.842 -33.494 30.969 1 62.24 ? O2A FAD 700 B 1 
HETATM 4 O O5B FAD . . . F 2 35.893 -32.235 32.848 1 62.99 ? O5B FAD 700 B 1 
HETATM 5 C C5B FAD . . . F 2 35.509 -31.081 33.625 1 66.2 ? C5B FAD 700 B 1 
HETATM 6 C C4B FAD . . . F 2 34.33 -31.547 34.499 1 67.15 ? C4B FAD 700 B 1 
HETATM 7 O O4B FAD . . . F 2 33.775 -30.428 35.153 1 68.05 ? O4B FAD 700 B 1 
HETATM 8 C C3B FAD . . . F 2 33.169 -32.18 33.738 1 66.72 ? C3B FAD 700 B 1 
HETATM 9 O O3B FAD . . . F 2 33.023 -33.54 34.051 1 65.36 ? O3B FAD 700 B 1 
HETATM 10 C C2B FAD . . . F 2 31.992 -31.328 34.118 1 66.09 ? C2B FAD 700 B 1 
HETATM 11 O O2B FAD . . . F 2 30.741 -31.973 34.14 1 66.49 ? O2B FAD 700 B 1 
HETATM 12 C C1B FAD . . . F 2 32.443 -30.751 35.457 1 64.99 ? C1B FAD 700 B 1 
HETATM 13 N N9A FAD . . . F 2 31.762 -29.512 35.897 1 63.6 ? N9A FAD 700 B 1 
HETATM 14 C C8A FAD . . . F 2 31.504 -28.388 35.149 1 64.05 ? C8A FAD 700 B 1 
HETATM 15 N N7A FAD . . . F 2 30.88 -27.442 35.839 1 63.91 ? N7A FAD 700 B 1 
HETATM 16 C C5A FAD . . . F 2 30.724 -27.974 37.09 1 62.22 ? C5A FAD 700 B 1 
HETATM 17 C C6A FAD . . . F 2 30.14 -27.46 38.27 1 61.4 ? C6A FAD 700 B 1 
HETATM 18 N N6A FAD . . . F 2 29.597 -26.267 38.372 1 63.59 ? N6A FAD 700 B 1 
HETATM 19 N N1A FAD . . . F 2 30.144 -28.27 39.374 1 61.48 ? N1A FAD 700 B 1 
HETATM 20 C C2A FAD . . . F 2 30.702 -29.527 39.305 1 60.47 ? C2A FAD 700 B 1 
HETATM 21 N N3A FAD . . . F 2 31.278 -30.073 38.215 1 61.27 ? N3A FAD 700 B 1 
HETATM 22 C C4A FAD . . . F 2 31.267 -29.264 37.136 1 62.43 ? C4A FAD 700 B 1 
HETATM 23 N N1 FAD . . . F 2 42.716 -35.462 23.978 1 75.03 ? N1 FAD 700 B 1 
HETATM 24 C C2 FAD . . . F 2 43.724 -36.333 23.603 1 75.54 ? C2 FAD 700 B 1 
HETATM 25 O O2 FAD . . . F 2 44.809 -36.339 24.183 1 74.66 ? O2 FAD 700 B 1 
HETATM 26 N N3 FAD . . . F 2 43.472 -37.224 22.54 1 75.67 ? N3 FAD 700 B 1 
HETATM 27 C C4 FAD . . . F 2 42.282 -37.283 21.846 1 77.34 ? C4 FAD 700 B 1 
HETATM 28 O O4 FAD . . . F 2 42.13 -38.107 20.924 1 78.99 ? O4 FAD 700 B 1 
HETATM 29 C C4X FAD . . . F 2 41.247 -36.388 22.234 1 76.78 ? C4X FAD 700 B 1 
HETATM 30 N N5 FAD . . . F 2 39.997 -36.395 21.586 1 77.91 ? N5 FAD 700 B 1 
HETATM 31 C C5X FAD . . . F 2 38.971 -35.54 22.006 1 79.17 ? C5X FAD 700 B 1 
HETATM 32 C C6 FAD . . . F 2 37.722 -35.573 21.378 1 80.85 ? C6 FAD 700 B 1 
HETATM 33 C C7 FAD . . . F 2 36.656 -34.755 21.792 1 81.16 ? C7 FAD 700 B 1 
HETATM 34 C C7M FAD . . . F 2 35.333 -34.837 21.089 1 81.94 ? C7M FAD 700 B 1 
HETATM 35 C C8 FAD . . . F 2 36.869 -33.858 22.891 1 81.18 ? C8 FAD 700 B 1 
HETATM 36 C C8M FAD . . . F 2 35.756 -32.953 23.387 1 81.84 ? C8M FAD 700 B 1 
HETATM 37 C C9 FAD . . . F 2 38.131 -33.796 23.536 1 79.72 ? C9 FAD 700 B 1 
HETATM 38 C C9A FAD . . . F 2 39.202 -34.628 23.114 1 78.1 ? C9A FAD 700 B 1 
HETATM 39 N N10 FAD . . . F 2 40.498 -34.615 23.746 1 75.86 ? N10 FAD 700 B 1 
HETATM 40 C C10 FAD . . . F 2 41.507 -35.491 23.316 1 75.89 ? C10 FAD 700 B 1 
HETATM 41 C C1' FAD . . . F 2 40.82 -33.69 24.884 1 73.39 ? C1' FAD 700 B 1 
HETATM 42 C C2' FAD . . . F 2 40.67 -34.301 26.255 1 72.37 ? C2' FAD 700 B 1 
HETATM 43 O O2' FAD . . . F 2 39.52 -35.106 26.26 1 75 ? O2' FAD 700 B 1 
HETATM 44 C C3' FAD . . . F 2 40.567 -33.155 27.278 1 71.01 ? C3' FAD 700 B 1 
HETATM 45 O O3' FAD . . . F 2 41.737 -32.332 27.267 1 71.6 ? O3' FAD 700 B 1 
HETATM 46 C C4' FAD . . . F 2 40.412 -33.587 28.747 1 69.62 ? C4' FAD 700 B 1 
HETATM 47 O O4' FAD . . . F 2 39.415 -34.583 28.911 1 70.78 ? O4' FAD 700 B 1 
HETATM 48 C C5' FAD . . . F 2 40.065 -32.387 29.611 1 67.61 ? C5' FAD 700 B 1 
HETATM 49 O O5' FAD . . . F 2 39.904 -32.911 30.913 1 63.72 ? O5' FAD 700 B 1 
HETATM 50 P P FAD . . . F 2 39.45 -32.054 32.132 1 62.24 ? P FAD 700 B 1 
HETATM 51 O O1P FAD . . . F 2 39.395 -33.012 33.252 1 62.6 ? O1P FAD 700 B 1 
HETATM 52 O O2P FAD . . . F 2 40.36 -30.871 32.325 1 61.69 ? O2P FAD 700 B 1 
HETATM 53 O O3P FAD . . . F 2 38.055 -31.468 31.787 1 62.16 ? O3P FAD 700 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           53 
#