data_3I79
#
_model_server_result.job_id            zyxJdQla0sjL2Joc0AFMeQ 
_model_server_result.datetime_utc      '2024-11-16 00:20:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3i79 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    3I79 
#
_exptl.entry_id    3I79 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.98 
_cell.angle_gamma         90 
_cell.entry_id            3I79 
_cell.length_a            48.144 
_cell.length_b            71.861 
_cell.length_c            67.265 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3I79 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3I79 
_atom_sites.fract_transf_matrix[1][1]    0.020771 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004788 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013916 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015256 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 701 701 EDO EDO . 
C 3 HOH A 1 801 801 HOH HOH . 
C 3 HOH A 2 802 802 HOH HOH . 
C 3 HOH A 3 803 803 HOH HOH . 
C 3 HOH A 4 804 804 HOH HOH . 
C 3 HOH A 5 805 805 HOH HOH . 
C 3 HOH A 6 806 806 HOH HOH . 
C 3 HOH A 7 807 807 HOH HOH . 
C 3 HOH A 8 808 808 HOH HOH . 
C 3 HOH A 9 809 809 HOH HOH . 
C 3 HOH A 10 810 810 HOH HOH . 
C 3 HOH A 11 811 811 HOH HOH . 
C 3 HOH A 12 812 812 HOH HOH . 
C 3 HOH A 13 813 813 HOH HOH . 
C 3 HOH A 14 814 814 HOH HOH . 
C 3 HOH A 15 815 815 HOH HOH . 
C 3 HOH A 16 816 816 HOH HOH . 
C 3 HOH A 17 817 817 HOH HOH . 
C 3 HOH A 18 818 818 HOH HOH . 
C 3 HOH A 19 819 819 HOH HOH . 
C 3 HOH A 20 820 820 HOH HOH . 
C 3 HOH A 21 821 821 HOH HOH . 
C 3 HOH A 22 822 822 HOH HOH . 
C 3 HOH A 23 823 823 HOH HOH . 
C 3 HOH A 24 824 824 HOH HOH . 
C 3 HOH A 25 825 825 HOH HOH . 
C 3 HOH A 26 826 826 HOH HOH . 
C 3 HOH A 27 827 827 HOH HOH . 
C 3 HOH A 28 828 828 HOH HOH . 
C 3 HOH A 29 829 829 HOH HOH . 
C 3 HOH A 30 830 830 HOH HOH . 
C 3 HOH A 31 831 831 HOH HOH . 
C 3 HOH A 32 832 832 HOH HOH . 
C 3 HOH A 33 833 833 HOH HOH . 
C 3 HOH A 34 834 834 HOH HOH . 
C 3 HOH A 35 835 835 HOH HOH . 
C 3 HOH A 36 836 836 HOH HOH . 
C 3 HOH A 37 837 837 HOH HOH . 
C 3 HOH A 38 838 838 HOH HOH . 
C 3 HOH A 39 839 839 HOH HOH . 
C 3 HOH A 40 840 840 HOH HOH . 
C 3 HOH A 41 841 841 HOH HOH . 
C 3 HOH A 42 842 842 HOH HOH . 
C 3 HOH A 43 843 843 HOH HOH . 
C 3 HOH A 44 844 844 HOH HOH . 
C 3 HOH A 45 845 845 HOH HOH . 
C 3 HOH A 46 846 846 HOH HOH . 
C 3 HOH A 47 847 847 HOH HOH . 
C 3 HOH A 48 848 848 HOH HOH . 
C 3 HOH A 49 849 849 HOH HOH . 
C 3 HOH A 50 850 850 HOH HOH . 
C 3 HOH A 51 851 851 HOH HOH . 
C 3 HOH A 52 852 852 HOH HOH . 
C 3 HOH A 53 853 853 HOH HOH . 
C 3 HOH A 54 854 854 HOH HOH . 
C 3 HOH A 55 855 855 HOH HOH . 
C 3 HOH A 56 856 856 HOH HOH . 
C 3 HOH A 57 857 857 HOH HOH . 
C 3 HOH A 58 858 858 HOH HOH . 
C 3 HOH A 59 859 859 HOH HOH . 
C 3 HOH A 60 860 860 HOH HOH . 
C 3 HOH A 61 861 861 HOH HOH . 
C 3 HOH A 62 862 862 HOH HOH . 
C 3 HOH A 63 863 863 HOH HOH . 
C 3 HOH A 64 864 864 HOH HOH . 
C 3 HOH A 65 865 865 HOH HOH . 
C 3 HOH A 66 866 866 HOH HOH . 
C 3 HOH A 67 867 867 HOH HOH . 
C 3 HOH A 68 868 868 HOH HOH . 
C 3 HOH A 69 869 869 HOH HOH . 
C 3 HOH A 70 870 870 HOH HOH . 
C 3 HOH A 71 871 871 HOH HOH . 
C 3 HOH A 72 872 872 HOH HOH . 
C 3 HOH A 73 873 873 HOH HOH . 
C 3 HOH A 74 874 874 HOH HOH . 
C 3 HOH A 75 875 875 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 13.794 33.223 51.24 1 54.27 ? C1 EDO 701 A 1 
HETATM 2 O O1 EDO . . . B 2 12.951 32.761 52.306 1 55.24 ? O1 EDO 701 A 1 
HETATM 3 C C2 EDO . . . B 2 15.092 33.776 51.816 1 56.55 ? C2 EDO 701 A 1 
HETATM 4 O O2 EDO . . . B 2 15.98 32.69 52.112 1 58.05 ? O2 EDO 701 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           484 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#