data_3I7D # _model_server_result.job_id FFQYf77FQsP5IoJ6TU4w2A _model_server_result.datetime_utc '2024-11-05 00:17:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i7d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":164}' # _entry.id 3I7D # _exptl.entry_id 3I7D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3I7D _cell.length_a 52.815 _cell.length_b 52.815 _cell.length_c 252.163 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I7D _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 25 A ALA 24 1_555 A N MSE 26 A MSE 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 26 A MSE 25 1_555 A N ASP 27 A ASP 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale3 A C HIS 62 A HIS 61 1_555 A N MSE 63 A MSE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 63 A MSE 62 1_555 A N GLU 64 A GLU 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 A C VAL 69 A VAL 68 1_555 A N MSE 70 A MSE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 70 A MSE 69 1_555 A N VAL 71 A VAL 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C PRO 86 A PRO 85 1_555 A N MSE 87 A MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale8 A C MSE 87 A MSE 86 1_555 A N VAL 88 A VAL 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 A C ASP 131 A ASP 130 1_555 A N MSE 132 A MSE 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 A C MSE 132 A MSE 131 1_555 A N ASP 133 A ASP 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 A C ASP 133 A ASP 132 1_555 A N MSE 134 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale12 A C MSE 134 A MSE 133 1_555 A N MSE 135 A MSE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale13 A C MSE 135 A MSE 134 1_555 A N VAL 136 A VAL 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale14 B C MSE 2 B MSE 1 1_555 B N PRO 3 B PRO 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale15 B C ALA 25 B ALA 24 1_555 B N MSE 26 B MSE 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 B C MSE 26 B MSE 25 1_555 B N ASP 27 B ASP 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 B C HIS 62 B HIS 61 1_555 B N MSE 63 B MSE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale18 B C MSE 63 B MSE 62 1_555 B N GLU 64 B GLU 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale19 B C VAL 69 B VAL 68 1_555 B N MSE 70 B MSE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 B C MSE 70 B MSE 69 1_555 B N VAL 71 B VAL 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale21 B C PRO 86 B PRO 85 1_555 B N MSE 87 B MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale22 B C MSE 87 B MSE 86 1_555 B N VAL 88 B VAL 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale23 B C ASP 131 B ASP 130 1_555 B N MSE 132 B MSE 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale24 B C MSE 132 B MSE 131 1_555 B N ASP 133 B ASP 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale25 B C ASP 133 B ASP 132 1_555 B N MSE 134 B MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale26 B C MSE 134 B MSE 133 1_555 B N MSE 135 B MSE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale27 B C MSE 135 B MSE 134 1_555 B N VAL 136 B VAL 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3I7D _atom_sites.fract_transf_matrix[1][1] 0.018934 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018934 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 163 1 CL CL . D 3 CAC A 1 164 3 CAC CAC . E 4 ACT A 1 165 4 ACT ACT . F 3 CAC B 1 163 2 CAC CAC . G 5 PEG B 1 164 5 PEG PEG . H 6 HOH A 1 166 166 HOH HOH . H 6 HOH A 2 167 167 HOH HOH . H 6 HOH A 3 168 8 HOH HOH . H 6 HOH A 4 169 169 HOH HOH . H 6 HOH A 5 170 12 HOH HOH . H 6 HOH A 6 171 15 HOH HOH . H 6 HOH A 7 172 19 HOH HOH . H 6 HOH A 8 173 20 HOH HOH . H 6 HOH A 9 174 25 HOH HOH . H 6 HOH A 10 175 26 HOH HOH . H 6 HOH A 11 176 29 HOH HOH . H 6 HOH A 12 177 30 HOH HOH . H 6 HOH A 13 178 178 HOH HOH . H 6 HOH A 14 179 179 HOH HOH . H 6 HOH A 15 180 31 HOH HOH . H 6 HOH A 16 181 181 HOH HOH . H 6 HOH A 17 182 182 HOH HOH . H 6 HOH A 18 183 183 HOH HOH . H 6 HOH A 19 184 184 HOH HOH . H 6 HOH A 20 185 37 HOH HOH . H 6 HOH A 21 186 38 HOH HOH . H 6 HOH A 22 187 44 HOH HOH . H 6 HOH A 23 188 45 HOH HOH . H 6 HOH A 24 189 46 HOH HOH . H 6 HOH A 25 190 47 HOH HOH . H 6 HOH A 26 191 52 HOH HOH . H 6 HOH A 27 192 56 HOH HOH . H 6 HOH A 28 193 58 HOH HOH . H 6 HOH A 29 194 60 HOH HOH . H 6 HOH A 30 195 61 HOH HOH . H 6 HOH A 31 196 63 HOH HOH . H 6 HOH A 32 197 64 HOH HOH . H 6 HOH A 33 198 65 HOH HOH . H 6 HOH A 34 199 66 HOH HOH . H 6 HOH A 35 200 68 HOH HOH . H 6 HOH A 36 201 70 HOH HOH . H 6 HOH A 37 202 73 HOH HOH . H 6 HOH A 38 203 76 HOH HOH . H 6 HOH A 39 204 77 HOH HOH . H 6 HOH A 40 205 79 HOH HOH . H 6 HOH A 41 206 80 HOH HOH . H 6 HOH A 42 207 81 HOH HOH . H 6 HOH A 43 208 82 HOH HOH . H 6 HOH A 44 209 83 HOH HOH . H 6 HOH A 45 210 84 HOH HOH . H 6 HOH A 46 211 85 HOH HOH . H 6 HOH A 47 212 87 HOH HOH . H 6 HOH A 48 213 89 HOH HOH . H 6 HOH A 49 214 90 HOH HOH . H 6 HOH A 50 215 91 HOH HOH . H 6 HOH A 51 216 94 HOH HOH . H 6 HOH A 52 217 95 HOH HOH . H 6 HOH A 53 218 96 HOH HOH . H 6 HOH A 54 219 97 HOH HOH . H 6 HOH A 55 220 98 HOH HOH . H 6 HOH A 56 221 99 HOH HOH . H 6 HOH A 57 222 101 HOH HOH . H 6 HOH A 58 223 106 HOH HOH . H 6 HOH A 59 224 108 HOH HOH . H 6 HOH A 60 225 109 HOH HOH . H 6 HOH A 61 226 110 HOH HOH . H 6 HOH A 62 227 112 HOH HOH . H 6 HOH A 63 228 113 HOH HOH . H 6 HOH A 64 229 114 HOH HOH . H 6 HOH A 65 230 118 HOH HOH . H 6 HOH A 66 231 122 HOH HOH . H 6 HOH A 67 232 125 HOH HOH . H 6 HOH A 68 233 126 HOH HOH . H 6 HOH A 69 234 133 HOH HOH . H 6 HOH A 70 235 136 HOH HOH . H 6 HOH A 71 236 137 HOH HOH . H 6 HOH A 72 237 138 HOH HOH . H 6 HOH A 73 238 139 HOH HOH . H 6 HOH A 74 239 143 HOH HOH . H 6 HOH A 75 240 149 HOH HOH . H 6 HOH A 76 241 155 HOH HOH . H 6 HOH A 77 242 156 HOH HOH . H 6 HOH A 78 243 157 HOH HOH . I 6 HOH B 1 165 165 HOH HOH . I 6 HOH B 2 166 7 HOH HOH . I 6 HOH B 3 167 9 HOH HOH . I 6 HOH B 4 168 168 HOH HOH . I 6 HOH B 5 169 10 HOH HOH . I 6 HOH B 6 170 170 HOH HOH . I 6 HOH B 7 171 171 HOH HOH . I 6 HOH B 8 172 172 HOH HOH . I 6 HOH B 9 173 173 HOH HOH . I 6 HOH B 10 174 174 HOH HOH . I 6 HOH B 11 175 175 HOH HOH . I 6 HOH B 12 176 176 HOH HOH . I 6 HOH B 13 177 177 HOH HOH . I 6 HOH B 14 178 11 HOH HOH . I 6 HOH B 15 179 13 HOH HOH . I 6 HOH B 16 180 180 HOH HOH . I 6 HOH B 17 181 14 HOH HOH . I 6 HOH B 18 182 16 HOH HOH . I 6 HOH B 19 183 17 HOH HOH . I 6 HOH B 20 184 18 HOH HOH . I 6 HOH B 21 185 185 HOH HOH . I 6 HOH B 22 186 21 HOH HOH . I 6 HOH B 23 187 22 HOH HOH . I 6 HOH B 24 188 23 HOH HOH . I 6 HOH B 25 189 24 HOH HOH . I 6 HOH B 26 190 27 HOH HOH . I 6 HOH B 27 191 28 HOH HOH . I 6 HOH B 28 192 32 HOH HOH . I 6 HOH B 29 193 33 HOH HOH . I 6 HOH B 30 194 34 HOH HOH . I 6 HOH B 31 195 35 HOH HOH . I 6 HOH B 32 196 36 HOH HOH . I 6 HOH B 33 197 39 HOH HOH . I 6 HOH B 34 198 40 HOH HOH . I 6 HOH B 35 199 41 HOH HOH . I 6 HOH B 36 200 42 HOH HOH . I 6 HOH B 37 201 43 HOH HOH . I 6 HOH B 38 202 48 HOH HOH . I 6 HOH B 39 203 49 HOH HOH . I 6 HOH B 40 204 50 HOH HOH . I 6 HOH B 41 205 51 HOH HOH . I 6 HOH B 42 206 53 HOH HOH . I 6 HOH B 43 207 54 HOH HOH . I 6 HOH B 44 208 55 HOH HOH . I 6 HOH B 45 209 57 HOH HOH . I 6 HOH B 46 210 59 HOH HOH . I 6 HOH B 47 211 62 HOH HOH . I 6 HOH B 48 212 67 HOH HOH . I 6 HOH B 49 213 69 HOH HOH . I 6 HOH B 50 214 71 HOH HOH . I 6 HOH B 51 215 72 HOH HOH . I 6 HOH B 52 216 74 HOH HOH . I 6 HOH B 53 217 75 HOH HOH . I 6 HOH B 54 218 78 HOH HOH . I 6 HOH B 55 219 86 HOH HOH . I 6 HOH B 56 220 88 HOH HOH . I 6 HOH B 57 221 92 HOH HOH . I 6 HOH B 58 222 93 HOH HOH . I 6 HOH B 59 223 100 HOH HOH . I 6 HOH B 60 224 102 HOH HOH . I 6 HOH B 61 225 103 HOH HOH . I 6 HOH B 62 226 104 HOH HOH . I 6 HOH B 63 227 105 HOH HOH . I 6 HOH B 64 228 107 HOH HOH . I 6 HOH B 65 229 111 HOH HOH . I 6 HOH B 66 230 115 HOH HOH . I 6 HOH B 67 231 116 HOH HOH . I 6 HOH B 68 232 117 HOH HOH . I 6 HOH B 69 233 119 HOH HOH . I 6 HOH B 70 234 120 HOH HOH . I 6 HOH B 71 235 121 HOH HOH . I 6 HOH B 72 236 123 HOH HOH . I 6 HOH B 73 237 124 HOH HOH . I 6 HOH B 74 238 127 HOH HOH . I 6 HOH B 75 239 128 HOH HOH . I 6 HOH B 76 240 129 HOH HOH . I 6 HOH B 77 241 130 HOH HOH . I 6 HOH B 78 242 131 HOH HOH . I 6 HOH B 79 243 132 HOH HOH . I 6 HOH B 80 244 134 HOH HOH . I 6 HOH B 81 245 135 HOH HOH . I 6 HOH B 82 246 140 HOH HOH . I 6 HOH B 83 247 141 HOH HOH . I 6 HOH B 84 248 142 HOH HOH . I 6 HOH B 85 249 144 HOH HOH . I 6 HOH B 86 250 145 HOH HOH . I 6 HOH B 87 251 146 HOH HOH . I 6 HOH B 88 252 147 HOH HOH . I 6 HOH B 89 253 148 HOH HOH . I 6 HOH B 90 254 150 HOH HOH . I 6 HOH B 91 255 151 HOH HOH . I 6 HOH B 92 256 152 HOH HOH . I 6 HOH B 93 257 153 HOH HOH . I 6 HOH B 94 258 154 HOH HOH . I 6 HOH B 95 259 158 HOH HOH . I 6 HOH B 96 260 159 HOH HOH . I 6 HOH B 97 261 160 HOH HOH . I 6 HOH B 98 262 161 HOH HOH . I 6 HOH B 99 263 162 HOH HOH . I 6 HOH B 100 264 163 HOH HOH . I 6 HOH B 101 265 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . G 5 -7.36 1.502 29.782 1 49.72 ? C1 PEG 164 B 1 HETATM 2 O O1 PEG . . . G 5 -6.744 0.432 30.498 1 47.23 ? O1 PEG 164 B 1 HETATM 3 C C2 PEG . . . G 5 -8.328 0.92 28.775 1 53.08 ? C2 PEG 164 B 1 HETATM 4 O O2 PEG . . . G 5 -8.629 1.906 27.783 1 55.97 ? O2 PEG 164 B 1 HETATM 5 C C3 PEG . . . G 5 -9.688 1.469 26.908 1 57.19 ? C3 PEG 164 B 1 HETATM 6 C C4 PEG . . . G 5 -9.189 0.419 25.904 1 56.33 ? C4 PEG 164 B 1 HETATM 7 O O4 PEG . . . G 5 -9.705 -0.873 26.218 1 54.03 ? O4 PEG 164 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #