data_3I99 # _model_server_result.job_id EU9H6zzsfgph9XUrWGLiAQ _model_server_result.datetime_utc '2025-01-02 22:43:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":359}' # _entry.id 3I99 # _exptl.entry_id 3I99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3I99 _cell.length_a 84.334 _cell.length_b 84.334 _cell.length_c 53.335 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 10 A THR 10 1_555 A N MSE 11 A MSE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 A C MSE 11 A MSE 11 1_555 A N GLN 12 A GLN 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C ASN 65 A ASN 65 1_555 A N MSE 66 A MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale4 A C MSE 66 A MSE 66 1_555 A N LEU 67 A LEU 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C GLY 74 A GLY 74 1_555 A N MSE 75 A MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 A C MSE 75 A MSE 75 1_555 A N ILE 76 A ILE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale7 A C THR 164 A THR 164 1_555 A N MSE 165 A MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 A C MSE 165 A MSE 165 1_555 A N GLU 166 A GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale9 A C ARG 227 A ARG 227 1_555 A N MSE 228 A MSE 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 A C MSE 228 A MSE 228 1_555 A N GLU 229 A GLU 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 A C VAL 236 A VAL 236 1_555 A N MSE 237 A MSE 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale12 A C MSE 237 A MSE 237 1_555 A N GLY 238 A GLY 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale13 A C LEU 316 A LEU 316 1_555 A N MSE 317 A MSE 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale14 A C MSE 317 A MSE 317 1_555 A N LEU 318 A LEU 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 351 n n P O2 PO4 sing 352 n n P O3 PO4 sing 353 n n P O4 PO4 sing 354 n n # _atom_sites.entry_id 3I99 _atom_sites.fract_transf_matrix[1][1] 0.011858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 358 1 FAD FAD . C 3 PO4 A 1 359 1 PO4 PO4 . D 3 PO4 A 1 360 2 PO4 PO4 . E 4 HOH A 1 361 1 HOH HOH . E 4 HOH A 2 362 2 HOH HOH . E 4 HOH A 3 363 3 HOH HOH . E 4 HOH A 4 364 4 HOH HOH . E 4 HOH A 5 365 5 HOH HOH . E 4 HOH A 6 366 6 HOH HOH . E 4 HOH A 7 367 7 HOH HOH . E 4 HOH A 8 368 8 HOH HOH . E 4 HOH A 9 369 9 HOH HOH . E 4 HOH A 10 370 10 HOH HOH . E 4 HOH A 11 371 11 HOH HOH . E 4 HOH A 12 372 12 HOH HOH . E 4 HOH A 13 373 13 HOH HOH . E 4 HOH A 14 374 14 HOH HOH . E 4 HOH A 15 375 15 HOH HOH . E 4 HOH A 16 376 16 HOH HOH . E 4 HOH A 17 377 17 HOH HOH . E 4 HOH A 18 378 20 HOH HOH . E 4 HOH A 19 379 21 HOH HOH . E 4 HOH A 20 380 22 HOH HOH . E 4 HOH A 21 381 24 HOH HOH . E 4 HOH A 22 382 25 HOH HOH . E 4 HOH A 23 383 26 HOH HOH . E 4 HOH A 24 384 28 HOH HOH . E 4 HOH A 25 385 29 HOH HOH . E 4 HOH A 26 386 30 HOH HOH . E 4 HOH A 27 387 31 HOH HOH . E 4 HOH A 28 388 32 HOH HOH . E 4 HOH A 29 389 35 HOH HOH . E 4 HOH A 30 390 36 HOH HOH . E 4 HOH A 31 391 37 HOH HOH . E 4 HOH A 32 392 38 HOH HOH . E 4 HOH A 33 393 39 HOH HOH . E 4 HOH A 34 394 40 HOH HOH . E 4 HOH A 35 395 41 HOH HOH . E 4 HOH A 36 396 44 HOH HOH . E 4 HOH A 37 397 45 HOH HOH . E 4 HOH A 38 398 47 HOH HOH . E 4 HOH A 39 399 49 HOH HOH . E 4 HOH A 40 400 50 HOH HOH . E 4 HOH A 41 401 51 HOH HOH . E 4 HOH A 42 402 53 HOH HOH . E 4 HOH A 43 403 54 HOH HOH . E 4 HOH A 44 404 55 HOH HOH . E 4 HOH A 45 405 60 HOH HOH . E 4 HOH A 46 406 61 HOH HOH . E 4 HOH A 47 407 64 HOH HOH . E 4 HOH A 48 408 67 HOH HOH . E 4 HOH A 49 409 68 HOH HOH . E 4 HOH A 50 410 72 HOH HOH . E 4 HOH A 51 411 73 HOH HOH . E 4 HOH A 52 412 74 HOH HOH . E 4 HOH A 53 413 76 HOH HOH . E 4 HOH A 54 414 81 HOH HOH . E 4 HOH A 55 415 88 HOH HOH . E 4 HOH A 56 416 89 HOH HOH . E 4 HOH A 57 417 92 HOH HOH . E 4 HOH A 58 418 95 HOH HOH . E 4 HOH A 59 419 97 HOH HOH . E 4 HOH A 60 420 101 HOH HOH . E 4 HOH A 61 421 102 HOH HOH . E 4 HOH A 62 422 108 HOH HOH . E 4 HOH A 63 423 109 HOH HOH . E 4 HOH A 64 424 117 HOH HOH . E 4 HOH A 65 425 123 HOH HOH . E 4 HOH A 66 426 126 HOH HOH . E 4 HOH A 67 427 137 HOH HOH . E 4 HOH A 68 428 142 HOH HOH . E 4 HOH A 69 429 147 HOH HOH . E 4 HOH A 70 430 159 HOH HOH . E 4 HOH A 71 431 162 HOH HOH . E 4 HOH A 72 432 163 HOH HOH . E 4 HOH A 73 433 166 HOH HOH . E 4 HOH A 74 434 167 HOH HOH . E 4 HOH A 75 435 168 HOH HOH . E 4 HOH A 76 436 1 HOH HOH . E 4 HOH A 77 437 2 HOH HOH . E 4 HOH A 78 438 8 HOH HOH . E 4 HOH A 79 439 9 HOH HOH . E 4 HOH A 80 440 10 HOH HOH . E 4 HOH A 81 441 14 HOH HOH . E 4 HOH A 82 442 15 HOH HOH . E 4 HOH A 83 443 16 HOH HOH . E 4 HOH A 84 444 17 HOH HOH . E 4 HOH A 85 445 20 HOH HOH . E 4 HOH A 86 446 24 HOH HOH . E 4 HOH A 87 447 32 HOH HOH . E 4 HOH A 88 448 52 HOH HOH . E 4 HOH A 89 449 66 HOH HOH . E 4 HOH A 90 450 83 HOH HOH . E 4 HOH A 91 451 111 HOH HOH . E 4 HOH A 92 452 113 HOH HOH . E 4 HOH A 93 453 117 HOH HOH . E 4 HOH A 94 454 126 HOH HOH . E 4 HOH A 95 455 1 HOH HOH . E 4 HOH A 96 456 2 HOH HOH . E 4 HOH A 97 457 3 HOH HOH . E 4 HOH A 98 458 4 HOH HOH . E 4 HOH A 99 459 5 HOH HOH . E 4 HOH A 100 460 6 HOH HOH . E 4 HOH A 101 461 13 HOH HOH . E 4 HOH A 102 462 14 HOH HOH . E 4 HOH A 103 463 47 HOH HOH . E 4 HOH A 104 464 59 HOH HOH . E 4 HOH A 105 465 127 HOH HOH . E 4 HOH A 106 466 1 HOH HOH . E 4 HOH A 107 467 3 HOH HOH . E 4 HOH A 108 468 15 HOH HOH . E 4 HOH A 109 469 58 HOH HOH . E 4 HOH A 110 470 69 HOH HOH . E 4 HOH A 111 471 75 HOH HOH . E 4 HOH A 112 472 25 HOH HOH . E 4 HOH A 113 473 27 HOH HOH . E 4 HOH A 114 474 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 25.637 14.106 20.399 1 79.21 ? P PO4 359 A 1 HETATM 2 O O1 PO4 . . . C 3 27.114 13.753 20.474 1 81.96 ? O1 PO4 359 A 1 HETATM 3 O O2 PO4 . . . C 3 25.324 14.424 18.948 1 77.99 ? O2 PO4 359 A 1 HETATM 4 O O3 PO4 . . . C 3 24.827 12.925 20.934 1 79.53 ? O3 PO4 359 A 1 HETATM 5 O O4 PO4 . . . C 3 25.38 15.36 21.259 1 81.72 ? O4 PO4 359 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #