data_3I9A # _model_server_result.job_id OV8z-TaeQBjfa5sTTm2Ung _model_server_result.datetime_utc '2025-06-20 14:39:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i9a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":128}' # _entry.id 3I9A # _exptl.entry_id 3I9A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3I9A _cell.length_a 45.08 _cell.length_b 87.83 _cell.length_c 66.55 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I9A _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -45.08 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 218 n n C1 C2 PGE sing 219 n n C1 H1 PGE sing 220 n n C1 H12 PGE sing 221 n n O1 HO1 PGE sing 222 n n C2 O2 PGE sing 223 n n C2 H2 PGE sing 224 n n C2 H22 PGE sing 225 n n O2 C3 PGE sing 226 n n C3 C4 PGE sing 227 n n C3 H3 PGE sing 228 n n C3 H32 PGE sing 229 n n C4 O3 PGE sing 230 n n C4 H4 PGE sing 231 n n C4 H42 PGE sing 232 n n O4 C6 PGE sing 233 n n O4 HO4 PGE sing 234 n n C6 C5 PGE sing 235 n n C6 H6 PGE sing 236 n n C6 H62 PGE sing 237 n n C5 O3 PGE sing 238 n n C5 H5 PGE sing 239 n n C5 H52 PGE sing 240 n n # _atom_sites.entry_id 3I9A _atom_sites.fract_transf_matrix[1][1] 0.022183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 128 1 PGE PGE . D 2 PGE B 1 128 1 PGE PGE . E 3 HOH A 1 129 129 HOH HOH . E 3 HOH A 2 130 1 HOH HOH . E 3 HOH A 3 131 131 HOH HOH . E 3 HOH A 4 132 3 HOH HOH . E 3 HOH A 5 133 133 HOH HOH . E 3 HOH A 6 134 4 HOH HOH . E 3 HOH A 7 135 135 HOH HOH . E 3 HOH A 8 136 136 HOH HOH . E 3 HOH A 9 137 137 HOH HOH . E 3 HOH A 10 138 7 HOH HOH . E 3 HOH A 11 139 9 HOH HOH . E 3 HOH A 12 140 10 HOH HOH . E 3 HOH A 13 141 11 HOH HOH . E 3 HOH A 14 142 15 HOH HOH . E 3 HOH A 15 143 16 HOH HOH . E 3 HOH A 16 144 144 HOH HOH . E 3 HOH A 17 145 17 HOH HOH . E 3 HOH A 18 146 146 HOH HOH . E 3 HOH A 19 147 147 HOH HOH . E 3 HOH A 20 148 148 HOH HOH . E 3 HOH A 21 149 18 HOH HOH . E 3 HOH A 22 150 150 HOH HOH . E 3 HOH A 23 151 19 HOH HOH . E 3 HOH A 24 152 152 HOH HOH . E 3 HOH A 25 153 153 HOH HOH . E 3 HOH A 26 154 20 HOH HOH . E 3 HOH A 27 155 22 HOH HOH . E 3 HOH A 28 156 156 HOH HOH . E 3 HOH A 29 157 24 HOH HOH . E 3 HOH A 30 158 158 HOH HOH . E 3 HOH A 31 159 25 HOH HOH . E 3 HOH A 32 160 160 HOH HOH . E 3 HOH A 33 161 26 HOH HOH . E 3 HOH A 34 162 27 HOH HOH . E 3 HOH A 35 163 30 HOH HOH . E 3 HOH A 36 164 33 HOH HOH . E 3 HOH A 37 165 34 HOH HOH . E 3 HOH A 38 166 35 HOH HOH . E 3 HOH A 39 167 37 HOH HOH . E 3 HOH A 40 168 38 HOH HOH . E 3 HOH A 41 169 41 HOH HOH . E 3 HOH A 42 170 48 HOH HOH . E 3 HOH A 43 171 49 HOH HOH . E 3 HOH A 44 172 51 HOH HOH . E 3 HOH A 45 173 54 HOH HOH . E 3 HOH A 46 174 55 HOH HOH . E 3 HOH A 47 175 175 HOH HOH . E 3 HOH A 48 176 57 HOH HOH . E 3 HOH A 49 177 58 HOH HOH . E 3 HOH A 50 178 61 HOH HOH . E 3 HOH A 51 179 179 HOH HOH . E 3 HOH A 52 180 67 HOH HOH . E 3 HOH A 53 181 181 HOH HOH . E 3 HOH A 54 182 182 HOH HOH . E 3 HOH A 55 183 68 HOH HOH . E 3 HOH A 56 184 184 HOH HOH . E 3 HOH A 57 185 72 HOH HOH . E 3 HOH A 58 186 75 HOH HOH . E 3 HOH A 59 187 76 HOH HOH . E 3 HOH A 60 188 78 HOH HOH . E 3 HOH A 61 189 79 HOH HOH . E 3 HOH A 62 190 81 HOH HOH . E 3 HOH A 63 191 83 HOH HOH . E 3 HOH A 64 192 192 HOH HOH . E 3 HOH A 65 193 84 HOH HOH . E 3 HOH A 66 194 85 HOH HOH . E 3 HOH A 67 195 90 HOH HOH . E 3 HOH A 68 196 93 HOH HOH . E 3 HOH A 69 197 197 HOH HOH . E 3 HOH A 70 198 94 HOH HOH . E 3 HOH A 71 199 98 HOH HOH . E 3 HOH A 72 200 99 HOH HOH . E 3 HOH A 73 201 201 HOH HOH . E 3 HOH A 74 202 202 HOH HOH . E 3 HOH A 75 203 102 HOH HOH . E 3 HOH A 76 204 104 HOH HOH . E 3 HOH A 77 205 108 HOH HOH . E 3 HOH A 78 206 206 HOH HOH . E 3 HOH A 79 207 110 HOH HOH . E 3 HOH A 80 208 111 HOH HOH . E 3 HOH A 81 209 112 HOH HOH . E 3 HOH A 82 210 113 HOH HOH . E 3 HOH A 83 211 116 HOH HOH . E 3 HOH A 84 212 122 HOH HOH . E 3 HOH A 85 213 125 HOH HOH . E 3 HOH A 86 214 127 HOH HOH . E 3 HOH A 87 215 215 HOH HOH . E 3 HOH A 88 216 128 HOH HOH . E 3 HOH A 89 221 221 HOH HOH . E 3 HOH A 90 225 225 HOH HOH . E 3 HOH A 91 228 228 HOH HOH . E 3 HOH A 92 233 233 HOH HOH . E 3 HOH A 93 249 249 HOH HOH . E 3 HOH A 94 257 257 HOH HOH . E 3 HOH A 95 258 258 HOH HOH . E 3 HOH A 96 261 261 HOH HOH . E 3 HOH A 97 263 263 HOH HOH . E 3 HOH A 98 266 266 HOH HOH . E 3 HOH A 99 275 275 HOH HOH . E 3 HOH A 100 277 277 HOH HOH . E 3 HOH A 101 279 279 HOH HOH . E 3 HOH A 102 281 281 HOH HOH . E 3 HOH A 103 283 283 HOH HOH . E 3 HOH A 104 284 284 HOH HOH . E 3 HOH A 105 286 286 HOH HOH . E 3 HOH A 106 288 288 HOH HOH . E 3 HOH A 107 290 290 HOH HOH . E 3 HOH A 108 292 292 HOH HOH . E 3 HOH A 109 293 293 HOH HOH . E 3 HOH A 110 297 297 HOH HOH . E 3 HOH A 111 298 298 HOH HOH . E 3 HOH A 112 302 302 HOH HOH . E 3 HOH A 113 316 316 HOH HOH . E 3 HOH A 114 328 328 HOH HOH . E 3 HOH A 115 330 330 HOH HOH . E 3 HOH A 116 338 338 HOH HOH . E 3 HOH A 117 344 344 HOH HOH . E 3 HOH A 118 349 349 HOH HOH . E 3 HOH A 119 350 350 HOH HOH . E 3 HOH A 120 351 351 HOH HOH . E 3 HOH A 121 355 355 HOH HOH . E 3 HOH A 122 356 356 HOH HOH . E 3 HOH A 123 357 357 HOH HOH . E 3 HOH A 124 358 358 HOH HOH . E 3 HOH A 125 359 359 HOH HOH . E 3 HOH A 126 362 362 HOH HOH . E 3 HOH A 127 364 364 HOH HOH . E 3 HOH A 128 365 365 HOH HOH . E 3 HOH A 129 368 368 HOH HOH . E 3 HOH A 130 369 369 HOH HOH . E 3 HOH A 131 370 370 HOH HOH . E 3 HOH A 132 373 373 HOH HOH . E 3 HOH A 133 377 377 HOH HOH . E 3 HOH A 134 378 378 HOH HOH . E 3 HOH A 135 380 380 HOH HOH . E 3 HOH A 136 382 382 HOH HOH . E 3 HOH A 137 383 383 HOH HOH . E 3 HOH A 138 386 386 HOH HOH . E 3 HOH A 139 387 387 HOH HOH . E 3 HOH A 140 389 389 HOH HOH . E 3 HOH A 141 390 390 HOH HOH . E 3 HOH A 142 392 392 HOH HOH . E 3 HOH A 143 394 394 HOH HOH . E 3 HOH A 144 395 395 HOH HOH . E 3 HOH A 145 396 396 HOH HOH . E 3 HOH A 146 398 398 HOH HOH . E 3 HOH A 147 399 399 HOH HOH . E 3 HOH A 148 400 400 HOH HOH . E 3 HOH A 149 401 401 HOH HOH . F 3 HOH B 1 129 2 HOH HOH . F 3 HOH B 2 130 130 HOH HOH . F 3 HOH B 3 131 6 HOH HOH . F 3 HOH B 4 132 8 HOH HOH . F 3 HOH B 5 133 13 HOH HOH . F 3 HOH B 6 134 14 HOH HOH . F 3 HOH B 7 135 21 HOH HOH . F 3 HOH B 8 136 23 HOH HOH . F 3 HOH B 9 137 28 HOH HOH . F 3 HOH B 10 138 138 HOH HOH . F 3 HOH B 11 139 139 HOH HOH . F 3 HOH B 12 140 29 HOH HOH . F 3 HOH B 13 141 32 HOH HOH . F 3 HOH B 14 142 36 HOH HOH . F 3 HOH B 15 143 39 HOH HOH . F 3 HOH B 16 144 40 HOH HOH . F 3 HOH B 17 145 145 HOH HOH . F 3 HOH B 18 146 42 HOH HOH . F 3 HOH B 19 147 46 HOH HOH . F 3 HOH B 20 148 47 HOH HOH . F 3 HOH B 21 149 50 HOH HOH . F 3 HOH B 22 150 53 HOH HOH . F 3 HOH B 23 151 59 HOH HOH . F 3 HOH B 24 152 60 HOH HOH . F 3 HOH B 25 153 62 HOH HOH . F 3 HOH B 26 154 65 HOH HOH . F 3 HOH B 27 155 155 HOH HOH . F 3 HOH B 28 156 69 HOH HOH . F 3 HOH B 29 157 157 HOH HOH . F 3 HOH B 30 158 73 HOH HOH . F 3 HOH B 31 159 74 HOH HOH . F 3 HOH B 32 160 80 HOH HOH . F 3 HOH B 33 161 82 HOH HOH . F 3 HOH B 34 162 162 HOH HOH . F 3 HOH B 35 163 86 HOH HOH . F 3 HOH B 36 164 164 HOH HOH . F 3 HOH B 37 165 165 HOH HOH . F 3 HOH B 38 166 87 HOH HOH . F 3 HOH B 39 167 88 HOH HOH . F 3 HOH B 40 168 91 HOH HOH . F 3 HOH B 41 169 92 HOH HOH . F 3 HOH B 42 170 170 HOH HOH . F 3 HOH B 43 171 171 HOH HOH . F 3 HOH B 44 172 172 HOH HOH . F 3 HOH B 45 173 173 HOH HOH . F 3 HOH B 46 174 95 HOH HOH . F 3 HOH B 47 175 96 HOH HOH . F 3 HOH B 48 176 100 HOH HOH . F 3 HOH B 49 177 101 HOH HOH . F 3 HOH B 50 178 103 HOH HOH . F 3 HOH B 51 179 105 HOH HOH . F 3 HOH B 52 180 109 HOH HOH . F 3 HOH B 53 181 114 HOH HOH . F 3 HOH B 54 182 115 HOH HOH . F 3 HOH B 55 183 121 HOH HOH . F 3 HOH B 56 184 123 HOH HOH . F 3 HOH B 57 185 124 HOH HOH . F 3 HOH B 58 188 188 HOH HOH . F 3 HOH B 59 189 189 HOH HOH . F 3 HOH B 60 198 198 HOH HOH . F 3 HOH B 61 199 199 HOH HOH . F 3 HOH B 62 203 203 HOH HOH . F 3 HOH B 63 207 207 HOH HOH . F 3 HOH B 64 208 208 HOH HOH . F 3 HOH B 65 213 213 HOH HOH . F 3 HOH B 66 216 216 HOH HOH . F 3 HOH B 67 217 217 HOH HOH . F 3 HOH B 68 222 222 HOH HOH . F 3 HOH B 69 224 224 HOH HOH . F 3 HOH B 70 236 236 HOH HOH . F 3 HOH B 71 237 237 HOH HOH . F 3 HOH B 72 238 238 HOH HOH . F 3 HOH B 73 239 239 HOH HOH . F 3 HOH B 74 240 240 HOH HOH . F 3 HOH B 75 241 241 HOH HOH . F 3 HOH B 76 242 242 HOH HOH . F 3 HOH B 77 245 245 HOH HOH . F 3 HOH B 78 250 250 HOH HOH . F 3 HOH B 79 255 255 HOH HOH . F 3 HOH B 80 256 256 HOH HOH . F 3 HOH B 81 267 267 HOH HOH . F 3 HOH B 82 268 268 HOH HOH . F 3 HOH B 83 269 269 HOH HOH . F 3 HOH B 84 270 270 HOH HOH . F 3 HOH B 85 289 289 HOH HOH . F 3 HOH B 86 291 291 HOH HOH . F 3 HOH B 87 294 294 HOH HOH . F 3 HOH B 88 295 295 HOH HOH . F 3 HOH B 89 296 296 HOH HOH . F 3 HOH B 90 306 306 HOH HOH . F 3 HOH B 91 308 308 HOH HOH . F 3 HOH B 92 309 309 HOH HOH . F 3 HOH B 93 313 313 HOH HOH . F 3 HOH B 94 321 321 HOH HOH . F 3 HOH B 95 325 325 HOH HOH . F 3 HOH B 96 333 333 HOH HOH . F 3 HOH B 97 335 335 HOH HOH . F 3 HOH B 98 337 337 HOH HOH . F 3 HOH B 99 343 343 HOH HOH . F 3 HOH B 100 345 345 HOH HOH . F 3 HOH B 101 353 353 HOH HOH . F 3 HOH B 102 354 354 HOH HOH . F 3 HOH B 103 360 360 HOH HOH . F 3 HOH B 104 361 361 HOH HOH . F 3 HOH B 105 363 363 HOH HOH . F 3 HOH B 106 372 372 HOH HOH . F 3 HOH B 107 374 374 HOH HOH . F 3 HOH B 108 375 375 HOH HOH . F 3 HOH B 109 376 376 HOH HOH . F 3 HOH B 110 381 381 HOH HOH . F 3 HOH B 111 384 384 HOH HOH . F 3 HOH B 112 388 388 HOH HOH . F 3 HOH B 113 391 391 HOH HOH . F 3 HOH B 114 393 393 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . A . D 2 -22.542 -22.818 4.984 0.5 39.66 ? C1 PGE 128 B 1 HETATM 2 C C1 PGE . B . D 2 -23.628 -23.822 3.769 0.5 34.9 ? C1 PGE 128 B 1 HETATM 3 O O1 PGE . A . D 2 -21.771 -22.588 3.796 0.5 38.88 ? O1 PGE 128 B 1 HETATM 4 O O1 PGE . B . D 2 -23.455 -24.411 5.063 0.5 32.76 ? O1 PGE 128 B 1 HETATM 5 C C2 PGE . A . D 2 -23.265 -21.545 5.409 0.5 39.83 ? C2 PGE 128 B 1 HETATM 6 C C2 PGE . B . D 2 -23.578 -22.309 3.923 0.5 36.06 ? C2 PGE 128 B 1 HETATM 7 O O2 PGE . A . D 2 -24.26 -21.206 4.439 0.5 39.94 ? O2 PGE 128 B 1 HETATM 8 O O2 PGE . B . D 2 -24.749 -21.862 4.603 0.5 37.61 ? O2 PGE 128 B 1 HETATM 9 C C3 PGE . A . D 2 -25.19 -20.243 4.934 0.5 39.75 ? C3 PGE 128 B 1 HETATM 10 C C3 PGE . B . D 2 -24.64 -20.52 5.075 0.5 38.44 ? C3 PGE 128 B 1 HETATM 11 C C4 PGE . A . D 2 -25.702 -19.391 3.778 0.5 39.57 ? C4 PGE 128 B 1 HETATM 12 C C4 PGE . B . D 2 -25.812 -20.207 5.998 0.5 39.53 ? C4 PGE 128 B 1 HETATM 13 O O4 PGE . A . D 2 -29.207 -17.852 3.735 0.5 37.84 ? O4 PGE 128 B 1 HETATM 14 O O4 PGE . B . D 2 -21.956 -20.039 7.374 0.5 40.19 ? O4 PGE 128 B 1 HETATM 15 C C6 PGE . A . D 2 -28.307 -16.835 4.188 0.5 38.68 ? C6 PGE 128 B 1 HETATM 16 C C6 PGE . B . D 2 -23.209 -20.522 6.874 0.5 40.12 ? C6 PGE 128 B 1 HETATM 17 C C5 PGE . A . D 2 -26.899 -17.412 4.237 0.5 39.04 ? C5 PGE 128 B 1 HETATM 18 C C5 PGE . B . D 2 -24.324 -20.117 7.833 0.5 40.01 ? C5 PGE 128 B 1 HETATM 19 O O3 PGE . A . D 2 -26.974 -18.829 4.09 0.5 39.21 ? O3 PGE 128 B 1 HETATM 20 O O3 PGE . B . D 2 -25.361 -19.447 7.118 0.5 39.76 ? O3 PGE 128 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #