data_3I9T
#
_model_server_result.job_id            qSid51oUy-WQ6In3Khkm7w 
_model_server_result.datetime_utc      '2025-07-27 10:06:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3i9t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2002}' 
#
_entry.id    3I9T 
#
_exptl.entry_id    3I9T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3I9T 
_cell.length_a            65.739 
_cell.length_b            65.739 
_cell.length_c            120.663 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3I9T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 25 A HIS 25 1_555 B FE HEM . A HEM 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc2 B FE HEM . A HEM 300 1_555 C S1 DTV . A DTV 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTV sing 70 n n 
S1 H1 DTV sing 71 n n 
C1 C2 DTV sing 72 n n 
C1 H1C1 DTV sing 73 n n 
C1 H1C2 DTV sing 74 n n 
C2 O2 DTV sing 75 n n 
C2 C3 DTV sing 76 n n 
C2 H2 DTV sing 77 n n 
O2 HA DTV sing 78 n n 
C3 O3 DTV sing 79 n n 
C3 C4 DTV sing 80 n n 
C3 H3 DTV sing 81 n n 
O3 HB DTV sing 82 n n 
C4 S4 DTV sing 83 n n 
C4 H4C1 DTV sing 84 n n 
C4 H4C2 DTV sing 85 n n 
S4 H4 DTV sing 86 n n 
#
_atom_sites.entry_id                     3I9T 
_atom_sites.fract_transf_matrix[1][1]    0.015212 
_atom_sites.fract_transf_matrix[1][2]    0.008782 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017565 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008288 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 300 300 HEM HEM . 
C 3 DTV A 1 2002 2002 DTV DTV . 
D 4 HOH A 1 290 1 HOH HOH . 
D 4 HOH A 2 291 2 HOH HOH . 
D 4 HOH A 3 292 3 HOH HOH . 
D 4 HOH A 4 293 4 HOH HOH . 
D 4 HOH A 5 294 5 HOH HOH . 
D 4 HOH A 6 295 6 HOH HOH . 
D 4 HOH A 7 296 7 HOH HOH . 
D 4 HOH A 8 297 8 HOH HOH . 
D 4 HOH A 9 298 9 HOH HOH . 
D 4 HOH A 10 299 10 HOH HOH . 
D 4 HOH A 11 301 11 HOH HOH . 
D 4 HOH A 12 302 12 HOH HOH . 
D 4 HOH A 13 303 13 HOH HOH . 
D 4 HOH A 14 304 14 HOH HOH . 
D 4 HOH A 15 305 15 HOH HOH . 
D 4 HOH A 16 306 16 HOH HOH . 
D 4 HOH A 17 307 17 HOH HOH . 
D 4 HOH A 18 308 18 HOH HOH . 
D 4 HOH A 19 309 19 HOH HOH . 
D 4 HOH A 20 310 20 HOH HOH . 
D 4 HOH A 21 311 21 HOH HOH . 
D 4 HOH A 22 312 22 HOH HOH . 
D 4 HOH A 23 313 23 HOH HOH . 
D 4 HOH A 24 314 24 HOH HOH . 
D 4 HOH A 25 315 25 HOH HOH . 
D 4 HOH A 26 316 26 HOH HOH . 
D 4 HOH A 27 317 27 HOH HOH . 
D 4 HOH A 28 318 28 HOH HOH . 
D 4 HOH A 29 319 29 HOH HOH . 
D 4 HOH A 30 320 30 HOH HOH . 
D 4 HOH A 31 321 31 HOH HOH . 
D 4 HOH A 32 322 32 HOH HOH . 
D 4 HOH A 33 323 33 HOH HOH . 
D 4 HOH A 34 324 34 HOH HOH . 
D 4 HOH A 35 325 35 HOH HOH . 
D 4 HOH A 36 326 36 HOH HOH . 
D 4 HOH A 37 327 37 HOH HOH . 
D 4 HOH A 38 328 38 HOH HOH . 
D 4 HOH A 39 329 39 HOH HOH . 
D 4 HOH A 40 330 40 HOH HOH . 
D 4 HOH A 41 331 41 HOH HOH . 
D 4 HOH A 42 332 42 HOH HOH . 
D 4 HOH A 43 333 43 HOH HOH . 
D 4 HOH A 44 334 44 HOH HOH . 
D 4 HOH A 45 335 45 HOH HOH . 
D 4 HOH A 46 336 46 HOH HOH . 
D 4 HOH A 47 337 47 HOH HOH . 
D 4 HOH A 48 338 48 HOH HOH . 
D 4 HOH A 49 339 49 HOH HOH . 
D 4 HOH A 50 340 50 HOH HOH . 
D 4 HOH A 51 341 51 HOH HOH . 
D 4 HOH A 52 342 52 HOH HOH . 
D 4 HOH A 53 343 53 HOH HOH . 
D 4 HOH A 54 344 54 HOH HOH . 
D 4 HOH A 55 345 55 HOH HOH . 
D 4 HOH A 56 346 57 HOH HOH . 
D 4 HOH A 57 347 58 HOH HOH . 
D 4 HOH A 58 348 59 HOH HOH . 
D 4 HOH A 59 349 60 HOH HOH . 
D 4 HOH A 60 350 61 HOH HOH . 
D 4 HOH A 61 351 62 HOH HOH . 
D 4 HOH A 62 352 63 HOH HOH . 
D 4 HOH A 63 353 64 HOH HOH . 
D 4 HOH A 64 354 65 HOH HOH . 
D 4 HOH A 65 355 66 HOH HOH . 
D 4 HOH A 66 356 67 HOH HOH . 
D 4 HOH A 67 357 68 HOH HOH . 
D 4 HOH A 68 358 69 HOH HOH . 
D 4 HOH A 69 359 71 HOH HOH . 
D 4 HOH A 70 360 72 HOH HOH . 
D 4 HOH A 71 361 73 HOH HOH . 
D 4 HOH A 72 362 74 HOH HOH . 
D 4 HOH A 73 363 75 HOH HOH . 
D 4 HOH A 74 364 76 HOH HOH . 
D 4 HOH A 75 365 77 HOH HOH . 
D 4 HOH A 76 366 78 HOH HOH . 
D 4 HOH A 77 367 79 HOH HOH . 
D 4 HOH A 78 368 80 HOH HOH . 
D 4 HOH A 79 369 81 HOH HOH . 
D 4 HOH A 80 370 82 HOH HOH . 
D 4 HOH A 81 371 84 HOH HOH . 
D 4 HOH A 82 372 85 HOH HOH . 
D 4 HOH A 83 373 86 HOH HOH . 
D 4 HOH A 84 374 88 HOH HOH . 
D 4 HOH A 85 375 89 HOH HOH . 
D 4 HOH A 86 376 90 HOH HOH . 
D 4 HOH A 87 377 91 HOH HOH . 
D 4 HOH A 88 378 92 HOH HOH . 
D 4 HOH A 89 379 93 HOH HOH . 
D 4 HOH A 90 380 95 HOH HOH . 
D 4 HOH A 91 381 96 HOH HOH . 
D 4 HOH A 92 382 97 HOH HOH . 
D 4 HOH A 93 383 98 HOH HOH . 
D 4 HOH A 94 384 99 HOH HOH . 
D 4 HOH A 95 385 100 HOH HOH . 
D 4 HOH A 96 386 101 HOH HOH . 
D 4 HOH A 97 387 102 HOH HOH . 
D 4 HOH A 98 388 103 HOH HOH . 
D 4 HOH A 99 389 104 HOH HOH . 
D 4 HOH A 100 390 105 HOH HOH . 
D 4 HOH A 101 391 106 HOH HOH . 
D 4 HOH A 102 392 107 HOH HOH . 
D 4 HOH A 103 393 108 HOH HOH . 
D 4 HOH A 104 394 109 HOH HOH . 
D 4 HOH A 105 395 110 HOH HOH . 
D 4 HOH A 106 396 112 HOH HOH . 
D 4 HOH A 107 397 113 HOH HOH . 
D 4 HOH A 108 398 114 HOH HOH . 
D 4 HOH A 109 399 116 HOH HOH . 
D 4 HOH A 110 400 117 HOH HOH . 
D 4 HOH A 111 401 119 HOH HOH . 
D 4 HOH A 112 402 120 HOH HOH . 
D 4 HOH A 113 403 123 HOH HOH . 
D 4 HOH A 114 404 128 HOH HOH . 
D 4 HOH A 115 405 129 HOH HOH . 
D 4 HOH A 116 406 131 HOH HOH . 
D 4 HOH A 117 407 133 HOH HOH . 
D 4 HOH A 118 408 134 HOH HOH . 
D 4 HOH A 119 409 135 HOH HOH . 
D 4 HOH A 120 410 137 HOH HOH . 
D 4 HOH A 121 411 149 HOH HOH . 
D 4 HOH A 122 412 151 HOH HOH . 
D 4 HOH A 123 413 153 HOH HOH . 
D 4 HOH A 124 414 155 HOH HOH . 
D 4 HOH A 125 415 157 HOH HOH . 
D 4 HOH A 126 416 159 HOH HOH . 
D 4 HOH A 127 417 169 HOH HOH . 
D 4 HOH A 128 418 172 HOH HOH . 
D 4 HOH A 129 419 178 HOH HOH . 
D 4 HOH A 130 420 183 HOH HOH . 
D 4 HOH A 131 421 187 HOH HOH . 
D 4 HOH A 132 422 188 HOH HOH . 
D 4 HOH A 133 423 189 HOH HOH . 
D 4 HOH A 134 424 190 HOH HOH . 
D 4 HOH A 135 425 191 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTV . . . C 3 -3.612 -29.464 -169.729 1 34.72 ? S1 DTV 2002 A 1 
HETATM 2 C C1 DTV . . . C 3 -3.232 -31.123 -170.429 1 35.41 ? C1 DTV 2002 A 1 
HETATM 3 C C2 DTV . . . C 3 -3.506 -32.224 -169.428 1 40.72 ? C2 DTV 2002 A 1 
HETATM 4 O O2 DTV . . . C 3 -4.872 -32.434 -169.073 1 46.31 ? O2 DTV 2002 A 1 
HETATM 5 C C3 DTV . . . C 3 -2.985 -33.557 -169.894 1 42.55 ? C3 DTV 2002 A 1 
HETATM 6 O O3 DTV . . . C 3 -3.993 -34.025 -170.752 1 47.06 ? O3 DTV 2002 A 1 
HETATM 7 C C4 DTV . . . C 3 -2.925 -34.451 -168.675 1 39.98 ? C4 DTV 2002 A 1 
HETATM 8 S S4 DTV . . . C 3 -2.443 -36.127 -169.101 1 45.02 ? S4 DTV 2002 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#