data_3I9U
#
_model_server_result.job_id            myshpS5LuVEu4Ij4HNI5rA 
_model_server_result.datetime_utc      '2024-11-13 12:54:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3i9u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2001}' 
#
_entry.id    3I9U 
#
_exptl.entry_id    3I9U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3I9U 
_cell.length_a            65.882 
_cell.length_b            65.882 
_cell.length_c            120.244 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3I9U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 25 A HIS 25 1_555 B FE HEM . A HEM 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc2 B FE HEM . A HEM 300 1_555 C S1 DTU . A DTU 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTU sing 70 n n 
S1 H1 DTU sing 71 n n 
C1 C2 DTU sing 72 n n 
C1 H1C1 DTU sing 73 n n 
C1 H1C2 DTU sing 74 n n 
C2 O2 DTU sing 75 n n 
C2 C3 DTU sing 76 n n 
C2 H2 DTU sing 77 n n 
O2 HA DTU sing 78 n n 
C3 O3 DTU sing 79 n n 
C3 C4 DTU sing 80 n n 
C3 H3 DTU sing 81 n n 
O3 HB DTU sing 82 n n 
C4 S4 DTU sing 83 n n 
C4 H4C1 DTU sing 84 n n 
C4 H4C2 DTU sing 85 n n 
S4 H4 DTU sing 86 n n 
#
_atom_sites.entry_id                     3I9U 
_atom_sites.fract_transf_matrix[1][1]    0.015179 
_atom_sites.fract_transf_matrix[1][2]    0.008763 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017527 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008316 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 300 300 HEM HEM . 
C 3 DTU A 1 2001 2001 DTU DTU . 
D 4 HOH A 1 264 1 HOH HOH . 
D 4 HOH A 2 265 2 HOH HOH . 
D 4 HOH A 3 266 3 HOH HOH . 
D 4 HOH A 4 267 4 HOH HOH . 
D 4 HOH A 5 268 5 HOH HOH . 
D 4 HOH A 6 269 6 HOH HOH . 
D 4 HOH A 7 270 7 HOH HOH . 
D 4 HOH A 8 271 8 HOH HOH . 
D 4 HOH A 9 272 9 HOH HOH . 
D 4 HOH A 10 273 10 HOH HOH . 
D 4 HOH A 11 274 11 HOH HOH . 
D 4 HOH A 12 275 12 HOH HOH . 
D 4 HOH A 13 276 13 HOH HOH . 
D 4 HOH A 14 277 14 HOH HOH . 
D 4 HOH A 15 278 15 HOH HOH . 
D 4 HOH A 16 279 16 HOH HOH . 
D 4 HOH A 17 280 17 HOH HOH . 
D 4 HOH A 18 281 18 HOH HOH . 
D 4 HOH A 19 282 19 HOH HOH . 
D 4 HOH A 20 283 20 HOH HOH . 
D 4 HOH A 21 284 21 HOH HOH . 
D 4 HOH A 22 285 22 HOH HOH . 
D 4 HOH A 23 286 23 HOH HOH . 
D 4 HOH A 24 287 24 HOH HOH . 
D 4 HOH A 25 288 25 HOH HOH . 
D 4 HOH A 26 289 26 HOH HOH . 
D 4 HOH A 27 290 27 HOH HOH . 
D 4 HOH A 28 291 28 HOH HOH . 
D 4 HOH A 29 292 29 HOH HOH . 
D 4 HOH A 30 293 30 HOH HOH . 
D 4 HOH A 31 294 31 HOH HOH . 
D 4 HOH A 32 295 32 HOH HOH . 
D 4 HOH A 33 296 33 HOH HOH . 
D 4 HOH A 34 297 34 HOH HOH . 
D 4 HOH A 35 298 35 HOH HOH . 
D 4 HOH A 36 299 36 HOH HOH . 
D 4 HOH A 37 301 37 HOH HOH . 
D 4 HOH A 38 302 38 HOH HOH . 
D 4 HOH A 39 303 39 HOH HOH . 
D 4 HOH A 40 304 40 HOH HOH . 
D 4 HOH A 41 305 41 HOH HOH . 
D 4 HOH A 42 306 42 HOH HOH . 
D 4 HOH A 43 307 45 HOH HOH . 
D 4 HOH A 44 308 46 HOH HOH . 
D 4 HOH A 45 309 48 HOH HOH . 
D 4 HOH A 46 310 49 HOH HOH . 
D 4 HOH A 47 311 50 HOH HOH . 
D 4 HOH A 48 312 51 HOH HOH . 
D 4 HOH A 49 313 52 HOH HOH . 
D 4 HOH A 50 314 53 HOH HOH . 
D 4 HOH A 51 315 54 HOH HOH . 
D 4 HOH A 52 316 55 HOH HOH . 
D 4 HOH A 53 317 56 HOH HOH . 
D 4 HOH A 54 318 57 HOH HOH . 
D 4 HOH A 55 319 58 HOH HOH . 
D 4 HOH A 56 320 60 HOH HOH . 
D 4 HOH A 57 321 61 HOH HOH . 
D 4 HOH A 58 322 62 HOH HOH . 
D 4 HOH A 59 323 64 HOH HOH . 
D 4 HOH A 60 324 65 HOH HOH . 
D 4 HOH A 61 325 66 HOH HOH . 
D 4 HOH A 62 326 68 HOH HOH . 
D 4 HOH A 63 327 69 HOH HOH . 
D 4 HOH A 64 328 70 HOH HOH . 
D 4 HOH A 65 329 71 HOH HOH . 
D 4 HOH A 66 330 72 HOH HOH . 
D 4 HOH A 67 331 73 HOH HOH . 
D 4 HOH A 68 332 74 HOH HOH . 
D 4 HOH A 69 333 75 HOH HOH . 
D 4 HOH A 70 334 77 HOH HOH . 
D 4 HOH A 71 335 79 HOH HOH . 
D 4 HOH A 72 336 80 HOH HOH . 
D 4 HOH A 73 337 81 HOH HOH . 
D 4 HOH A 74 338 83 HOH HOH . 
D 4 HOH A 75 339 84 HOH HOH . 
D 4 HOH A 76 340 85 HOH HOH . 
D 4 HOH A 77 341 86 HOH HOH . 
D 4 HOH A 78 342 88 HOH HOH . 
D 4 HOH A 79 343 89 HOH HOH . 
D 4 HOH A 80 344 90 HOH HOH . 
D 4 HOH A 81 345 91 HOH HOH . 
D 4 HOH A 82 346 92 HOH HOH . 
D 4 HOH A 83 347 94 HOH HOH . 
D 4 HOH A 84 348 95 HOH HOH . 
D 4 HOH A 85 349 97 HOH HOH . 
D 4 HOH A 86 350 98 HOH HOH . 
D 4 HOH A 87 351 99 HOH HOH . 
D 4 HOH A 88 352 102 HOH HOH . 
D 4 HOH A 89 353 103 HOH HOH . 
D 4 HOH A 90 354 105 HOH HOH . 
D 4 HOH A 91 355 107 HOH HOH . 
D 4 HOH A 92 356 108 HOH HOH . 
D 4 HOH A 93 357 109 HOH HOH . 
D 4 HOH A 94 358 110 HOH HOH . 
D 4 HOH A 95 359 112 HOH HOH . 
D 4 HOH A 96 360 113 HOH HOH . 
D 4 HOH A 97 361 114 HOH HOH . 
D 4 HOH A 98 362 115 HOH HOH . 
D 4 HOH A 99 363 116 HOH HOH . 
D 4 HOH A 100 364 117 HOH HOH . 
D 4 HOH A 101 365 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTU . . . C 3 -3.61 -29.667 -169.187 1 26.21 ? S1 DTU 2001 A 1 
HETATM 2 C C1 DTU . . . C 3 -3.345 -31.379 -169.751 1 30.85 ? C1 DTU 2001 A 1 
HETATM 3 C C2 DTU . . . C 3 -3.64 -32.381 -168.674 1 38.67 ? C2 DTU 2001 A 1 
HETATM 4 O O2 DTU . . . C 3 -5.033 -32.64 -168.59 1 47.24 ? O2 DTU 2001 A 1 
HETATM 5 C C3 DTU . . . C 3 -3.125 -33.701 -169.165 1 42.24 ? C3 DTU 2001 A 1 
HETATM 6 O O3 DTU . . . C 3 -1.769 -33.502 -169.535 1 47.03 ? O3 DTU 2001 A 1 
HETATM 7 C C4 DTU . . . C 3 -3.089 -34.7 -168.056 1 43.18 ? C4 DTU 2001 A 1 
HETATM 8 S S4 DTU . . . C 3 -2.37 -36.192 -168.825 1 49.34 ? S4 DTU 2001 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           8 
#