data_3IAK # _model_server_result.job_id Z81O07wBxx3Qx-nry5dBIA _model_server_result.datetime_utc '2024-10-11 00:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iak # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":415}' # _entry.id 3IAK # _exptl.entry_id 3IAK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.385 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(3,4-DIMETHOXYBENZYL)-6,7-DIMETHOXYISOQUINOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IAK _cell.length_a 83.502 _cell.length_b 83.502 _cell.length_c 148.144 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IAK _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x,-y,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 0 74.072 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 1 1_555 E O HOH . A HOH 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A NE2 HIS 100 A HIS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A OD2 ASP 137 A ASP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 254 A ASP 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc5 E O HOH . A HOH 5 1_555 C MG MG . A MG 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc6 E O HOH . A HOH 8 1_555 C MG MG . A MG 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc7 E O HOH . A HOH 9 1_555 C MG MG . A MG 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc8 A OD1 ASP 137 A ASP 201 1_555 C MG MG . A MG 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? # _chem_comp.formula 'C20 H21 N O4' _chem_comp.formula_weight 339.385 _chem_comp.id EV1 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(3,4-DIMETHOXYBENZYL)-6,7-DIMETHOXYISOQUINOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Papaverine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 O24 EV1 sing 83 n n O24 C16 EV1 sing 84 n n C16 C15 EV1 sing 85 n y C16 C17 EV1 doub 86 n y C15 O22 EV1 sing 87 n n C15 C14 EV1 doub 88 n y O22 C23 EV1 sing 89 n n C14 C13 EV1 sing 90 n y C13 C12 EV1 doub 91 n y C17 C12 EV1 sing 92 n y C12 C11 EV1 sing 93 n n C11 C10 EV1 sing 94 n n C10 N9 EV1 sing 95 n y C10 C3 EV1 doub 96 n y N9 C8 EV1 doub 97 n y C8 C7 EV1 sing 98 n y C7 C2 EV1 doub 99 n y C2 C3 EV1 sing 100 n y C2 C1 EV1 sing 101 n y C3 C4 EV1 sing 102 n y C4 C5 EV1 doub 103 n y C5 O20 EV1 sing 104 n n C5 C6 EV1 sing 105 n y O20 C21 EV1 sing 106 n n C6 C1 EV1 doub 107 n y C6 O18 EV1 sing 108 n n O18 C19 EV1 sing 109 n n C25 H251 EV1 sing 110 n n C25 H252 EV1 sing 111 n n C25 H253 EV1 sing 112 n n C17 H17 EV1 sing 113 n n C14 H14 EV1 sing 114 n n C23 H231 EV1 sing 115 n n C23 H232 EV1 sing 116 n n C23 H233 EV1 sing 117 n n C13 H13 EV1 sing 118 n n C11 H111 EV1 sing 119 n n C11 H112 EV1 sing 120 n n C8 H8 EV1 sing 121 n n C7 H7 EV1 sing 122 n n C1 H1 EV1 sing 123 n n C4 H4 EV1 sing 124 n n C21 H211 EV1 sing 125 n n C21 H212 EV1 sing 126 n n C21 H213 EV1 sing 127 n n C19 H191 EV1 sing 128 n n C19 H192 EV1 sing 129 n n C19 H193 EV1 sing 130 n n # _atom_sites.entry_id 3IAK _atom_sites.fract_transf_matrix[1][1] 0.011976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00675 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 MG A 1 414 1 MG MG . D 4 EV1 A 1 415 1 EV1 EV1 . E 5 HOH A 1 2 2 HOH HOH . E 5 HOH A 2 3 3 HOH HOH . E 5 HOH A 3 4 4 HOH HOH . E 5 HOH A 4 5 5 HOH HOH . E 5 HOH A 5 6 6 HOH HOH . E 5 HOH A 6 7 7 HOH HOH . E 5 HOH A 7 8 8 HOH HOH . E 5 HOH A 8 9 9 HOH HOH . E 5 HOH A 9 416 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C25 EV1 . . . D 4 19.391 -12.142 19.14 1 81.98 ? C25 EV1 415 A 1 HETATM 2 O O24 EV1 . . . D 4 20.217 -11.48 20.101 1 82.19 ? O24 EV1 415 A 1 HETATM 3 C C16 EV1 . . . D 4 20.799 -10.266 19.814 1 81.55 ? C16 EV1 415 A 1 HETATM 4 C C15 EV1 . . . D 4 20.065 -8.986 20.036 1 81.63 ? C15 EV1 415 A 1 HETATM 5 O O22 EV1 . . . D 4 18.783 -8.978 20.534 1 82.13 ? O22 EV1 415 A 1 HETATM 6 C C23 EV1 . . . D 4 18.379 -7.996 21.493 1 82.08 ? C23 EV1 415 A 1 HETATM 7 C C14 EV1 . . . D 4 20.701 -7.787 19.722 1 80.85 ? C14 EV1 415 A 1 HETATM 8 C C13 EV1 . . . D 4 21.997 -7.782 19.22 1 79.82 ? C13 EV1 415 A 1 HETATM 9 C C17 EV1 . . . D 4 22.098 -10.204 19.308 1 80.52 ? C17 EV1 415 A 1 HETATM 10 C C12 EV1 . . . D 4 22.686 -8.972 19.012 1 79.38 ? C12 EV1 415 A 1 HETATM 11 C C11 EV1 . . . D 4 24.094 -8.941 18.471 1 78.14 ? C11 EV1 415 A 1 HETATM 12 C C10 EV1 . . . D 4 24.324 -7.789 17.518 1 77.36 ? C10 EV1 415 A 1 HETATM 13 N N9 EV1 . . . D 4 24.759 -6.599 18.002 1 77.35 ? N9 EV1 415 A 1 HETATM 14 C C8 EV1 . . . D 4 24.988 -5.536 17.208 1 77.31 ? C8 EV1 415 A 1 HETATM 15 C C7 EV1 . . . D 4 24.806 -5.571 15.823 1 77.15 ? C7 EV1 415 A 1 HETATM 16 C C2 EV1 . . . D 4 24.368 -6.738 15.203 1 76.66 ? C2 EV1 415 A 1 HETATM 17 C C3 EV1 . . . D 4 24.101 -7.933 16.049 1 76.81 ? C3 EV1 415 A 1 HETATM 18 C C4 EV1 . . . D 4 23.66 -9.117 15.463 1 75.98 ? C4 EV1 415 A 1 HETATM 19 C C5 EV1 . . . D 4 23.468 -9.176 14.081 1 75.59 ? C5 EV1 415 A 1 HETATM 20 O O20 EV1 . . . D 4 23.039 -10.328 13.478 1 74.73 ? O20 EV1 415 A 1 HETATM 21 C C21 EV1 . . . D 4 22.05 -11.147 14.092 1 74.53 ? C21 EV1 415 A 1 HETATM 22 C C6 EV1 . . . D 4 23.741 -7.984 13.232 1 75.96 ? C6 EV1 415 A 1 HETATM 23 C C1 EV1 . . . D 4 24.178 -6.796 13.824 1 76.31 ? C1 EV1 415 A 1 HETATM 24 O O18 EV1 . . . D 4 23.539 -8.081 11.875 1 76.12 ? O18 EV1 415 A 1 HETATM 25 C C19 EV1 . . . D 4 24.237 -7.256 10.938 1 75.96 ? C19 EV1 415 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #