data_3IAX
#
_model_server_result.job_id            7MZnpzB3mjNpVnBaKbVwsA 
_model_server_result.datetime_utc      '2024-10-13 04:24:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3iax 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":502}' 
#
_entry.id    3IAX 
#
_exptl.entry_id    3IAX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.18 
_cell.angle_gamma         90 
_cell.entry_id            3IAX 
_cell.length_a            61.955 
_cell.length_b            40.174 
_cell.length_c            80.868 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3IAX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE ARG 142 A ARG 142 1_555 C NA NA . A NA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc2 A NE2 HIS 146 A HIS 146 1_555 C NA NA . A NA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? 
metalc ? metalc3 A OD2 ASP 186 A ASP 186 1_555 C NA NA . A NA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? 
metalc ? metalc4 A OD1 ASP 188 A ASP 188 1_555 C NA NA . A NA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
metalc ? metalc5 A OD1 ASP 336 A ASP 336 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? 
metalc ? metalc6 F O HOH . A HOH 485 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? 
metalc ? metalc7 D CA CA . A CA 501 1_555 G O HOH . B HOH 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     3IAX 
_atom_sites.fract_transf_matrix[1][1]    0.016141 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002032 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024892 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012463 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NA A 1 500 500 NA NA . 
D 4 CA A 1 501 501 CA CA . 
E 5 GOL A 1 502 502 GOL GOL . 
F 6 HOH A 1 439 1 HOH HOH . 
F 6 HOH A 2 440 2 HOH HOH . 
F 6 HOH A 3 441 3 HOH HOH . 
F 6 HOH A 4 442 4 HOH HOH . 
F 6 HOH A 5 443 5 HOH HOH . 
F 6 HOH A 6 444 6 HOH HOH . 
F 6 HOH A 7 445 7 HOH HOH . 
F 6 HOH A 8 446 8 HOH HOH . 
F 6 HOH A 9 447 9 HOH HOH . 
F 6 HOH A 10 448 10 HOH HOH . 
F 6 HOH A 11 449 11 HOH HOH . 
F 6 HOH A 12 450 12 HOH HOH . 
F 6 HOH A 13 451 13 HOH HOH . 
F 6 HOH A 14 452 14 HOH HOH . 
F 6 HOH A 15 453 15 HOH HOH . 
F 6 HOH A 16 454 16 HOH HOH . 
F 6 HOH A 17 455 17 HOH HOH . 
F 6 HOH A 18 456 18 HOH HOH . 
F 6 HOH A 19 457 19 HOH HOH . 
F 6 HOH A 20 458 20 HOH HOH . 
F 6 HOH A 21 459 21 HOH HOH . 
F 6 HOH A 22 460 22 HOH HOH . 
F 6 HOH A 23 461 23 HOH HOH . 
F 6 HOH A 24 462 24 HOH HOH . 
F 6 HOH A 25 463 25 HOH HOH . 
F 6 HOH A 26 464 26 HOH HOH . 
F 6 HOH A 27 465 27 HOH HOH . 
F 6 HOH A 28 466 28 HOH HOH . 
F 6 HOH A 29 467 29 HOH HOH . 
F 6 HOH A 30 468 30 HOH HOH . 
F 6 HOH A 31 469 31 HOH HOH . 
F 6 HOH A 32 470 32 HOH HOH . 
F 6 HOH A 33 471 34 HOH HOH . 
F 6 HOH A 34 472 35 HOH HOH . 
F 6 HOH A 35 473 36 HOH HOH . 
F 6 HOH A 36 474 38 HOH HOH . 
F 6 HOH A 37 475 39 HOH HOH . 
F 6 HOH A 38 476 40 HOH HOH . 
F 6 HOH A 39 477 41 HOH HOH . 
F 6 HOH A 40 478 42 HOH HOH . 
F 6 HOH A 41 479 43 HOH HOH . 
F 6 HOH A 42 480 44 HOH HOH . 
F 6 HOH A 43 481 45 HOH HOH . 
F 6 HOH A 44 482 46 HOH HOH . 
F 6 HOH A 45 483 47 HOH HOH . 
F 6 HOH A 46 484 48 HOH HOH . 
F 6 HOH A 47 485 49 HOH HOH . 
F 6 HOH A 48 486 50 HOH HOH . 
F 6 HOH A 49 487 51 HOH HOH . 
F 6 HOH A 50 488 52 HOH HOH . 
F 6 HOH A 51 489 53 HOH HOH . 
F 6 HOH A 52 490 54 HOH HOH . 
F 6 HOH A 53 491 55 HOH HOH . 
F 6 HOH A 54 492 56 HOH HOH . 
F 6 HOH A 55 493 57 HOH HOH . 
F 6 HOH A 56 494 60 HOH HOH . 
F 6 HOH A 57 495 61 HOH HOH . 
F 6 HOH A 58 496 62 HOH HOH . 
G 6 HOH B 1 116 33 HOH HOH . 
G 6 HOH B 2 117 37 HOH HOH . 
G 6 HOH B 3 118 58 HOH HOH . 
G 6 HOH B 4 119 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 5 -22.237 1.955 -11.007 1 58.63 ? C1 GOL 502 A 1 
HETATM 2 O O1 GOL . . . E 5 -21.058 1.516 -10.387 1 57.96 ? O1 GOL 502 A 1 
HETATM 3 C C2 GOL . . . E 5 -22.315 1.618 -12.471 1 57.97 ? C2 GOL 502 A 1 
HETATM 4 O O2 GOL . . . E 5 -21.01 1.694 -12.883 1 57.57 ? O2 GOL 502 A 1 
HETATM 5 C C3 GOL . . . E 5 -22.593 0.144 -12.656 1 58.73 ? C3 GOL 502 A 1 
HETATM 6 O O3 GOL . . . E 5 -21.548 -0.492 -13.323 1 61.84 ? O3 GOL 502 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#