data_3IBQ # _model_server_result.job_id sDgM_qZEgT2feTVWzgmn_A _model_server_result.datetime_utc '2024-10-19 11:34:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ibq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":282}' # _entry.id 3IBQ # _exptl.entry_id 3IBQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IBQ _cell.length_a 64.357 _cell.length_b 69.576 _cell.length_c 132.369 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IBQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 64.357 0 66.1845 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 5 A THR 3 1_555 A N MSE 6 A MSE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale2 A C MSE 6 A MSE 4 1_555 A N LEU 7 A LEU 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale3 A C ALA 29 A ALA 27 1_555 A N MSE 30 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 A C MSE 30 A MSE 28 1_555 A N GLN 31 A GLN 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale5 A C ALA 127 A ALA 125 1_555 A N MSE 128 A MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale6 A C MSE 128 A MSE 126 1_555 A N ARG 129 A ARG 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C ASN 243 A ASN 241 1_555 A N MSE 244 A MSE 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale8 A C MSE 244 A MSE 242 1_555 A N ALA 245 A ALA 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 B O1B ATP . A ATP 281 1_555 C MG MG . A MG 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc2 C MG MG . A MG 282 1_555 D O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc3 C MG MG . A MG 282 1_555 D O HOH . A HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 C MG MG . A MG 282 1_555 D O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc5 C MG MG . A MG 282 1_555 D O HOH . A HOH 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc6 C MG MG . A MG 282 1_555 D O HOH . A HOH 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IBQ _atom_sites.fract_transf_matrix[1][1] 0.015538 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007555 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 281 1 ATP ATP . C 3 MG A 1 282 1 MG MG . D 4 HOH A 1 283 1 HOH HOH . D 4 HOH A 2 284 2 HOH HOH . D 4 HOH A 3 285 3 HOH HOH . D 4 HOH A 4 286 4 HOH HOH . D 4 HOH A 5 287 5 HOH HOH . D 4 HOH A 6 288 6 HOH HOH . D 4 HOH A 7 289 7 HOH HOH . D 4 HOH A 8 290 8 HOH HOH . D 4 HOH A 9 291 9 HOH HOH . D 4 HOH A 10 292 10 HOH HOH . D 4 HOH A 11 293 12 HOH HOH . D 4 HOH A 12 294 13 HOH HOH . D 4 HOH A 13 295 14 HOH HOH . D 4 HOH A 14 296 15 HOH HOH . D 4 HOH A 15 297 16 HOH HOH . D 4 HOH A 16 298 17 HOH HOH . D 4 HOH A 17 299 18 HOH HOH . D 4 HOH A 18 300 19 HOH HOH . D 4 HOH A 19 301 20 HOH HOH . D 4 HOH A 20 302 21 HOH HOH . D 4 HOH A 21 303 22 HOH HOH . D 4 HOH A 22 304 23 HOH HOH . D 4 HOH A 23 305 24 HOH HOH . D 4 HOH A 24 306 25 HOH HOH . D 4 HOH A 25 307 26 HOH HOH . D 4 HOH A 26 308 27 HOH HOH . D 4 HOH A 27 309 28 HOH HOH . D 4 HOH A 28 310 29 HOH HOH . D 4 HOH A 29 311 30 HOH HOH . D 4 HOH A 30 312 31 HOH HOH . D 4 HOH A 31 313 32 HOH HOH . D 4 HOH A 32 314 33 HOH HOH . D 4 HOH A 33 315 34 HOH HOH . D 4 HOH A 34 316 35 HOH HOH . D 4 HOH A 35 317 36 HOH HOH . D 4 HOH A 36 318 37 HOH HOH . D 4 HOH A 37 319 38 HOH HOH . D 4 HOH A 38 320 39 HOH HOH . D 4 HOH A 39 321 40 HOH HOH . D 4 HOH A 40 322 41 HOH HOH . D 4 HOH A 41 323 42 HOH HOH . D 4 HOH A 42 324 43 HOH HOH . D 4 HOH A 43 325 44 HOH HOH . D 4 HOH A 44 326 45 HOH HOH . D 4 HOH A 45 327 46 HOH HOH . D 4 HOH A 46 328 47 HOH HOH . D 4 HOH A 47 329 48 HOH HOH . D 4 HOH A 48 330 49 HOH HOH . D 4 HOH A 49 331 50 HOH HOH . D 4 HOH A 50 332 51 HOH HOH . D 4 HOH A 51 333 52 HOH HOH . D 4 HOH A 52 334 53 HOH HOH . D 4 HOH A 53 335 54 HOH HOH . D 4 HOH A 54 336 55 HOH HOH . D 4 HOH A 55 337 56 HOH HOH . D 4 HOH A 56 338 57 HOH HOH . D 4 HOH A 57 339 58 HOH HOH . D 4 HOH A 58 340 59 HOH HOH . D 4 HOH A 59 341 60 HOH HOH . D 4 HOH A 60 342 61 HOH HOH . D 4 HOH A 61 343 62 HOH HOH . D 4 HOH A 62 344 63 HOH HOH . D 4 HOH A 63 345 64 HOH HOH . D 4 HOH A 64 346 65 HOH HOH . D 4 HOH A 65 347 66 HOH HOH . D 4 HOH A 66 348 67 HOH HOH . D 4 HOH A 67 349 68 HOH HOH . D 4 HOH A 68 350 69 HOH HOH . D 4 HOH A 69 351 70 HOH HOH . D 4 HOH A 70 352 71 HOH HOH . D 4 HOH A 71 353 72 HOH HOH . D 4 HOH A 72 354 73 HOH HOH . D 4 HOH A 73 355 74 HOH HOH . D 4 HOH A 74 356 75 HOH HOH . D 4 HOH A 75 357 76 HOH HOH . D 4 HOH A 76 358 77 HOH HOH . D 4 HOH A 77 359 78 HOH HOH . D 4 HOH A 78 360 79 HOH HOH . D 4 HOH A 79 361 80 HOH HOH . D 4 HOH A 80 362 81 HOH HOH . D 4 HOH A 81 363 82 HOH HOH . D 4 HOH A 82 364 83 HOH HOH . D 4 HOH A 83 365 84 HOH HOH . D 4 HOH A 84 366 85 HOH HOH . D 4 HOH A 85 367 86 HOH HOH . D 4 HOH A 86 368 87 HOH HOH . D 4 HOH A 87 369 88 HOH HOH . D 4 HOH A 88 370 89 HOH HOH . D 4 HOH A 89 371 90 HOH HOH . D 4 HOH A 90 372 91 HOH HOH . D 4 HOH A 91 373 92 HOH HOH . D 4 HOH A 92 374 93 HOH HOH . D 4 HOH A 93 375 94 HOH HOH . D 4 HOH A 94 376 95 HOH HOH . D 4 HOH A 95 377 96 HOH HOH . D 4 HOH A 96 378 97 HOH HOH . D 4 HOH A 97 379 99 HOH HOH . D 4 HOH A 98 380 101 HOH HOH . D 4 HOH A 99 381 102 HOH HOH . D 4 HOH A 100 382 103 HOH HOH . D 4 HOH A 101 383 104 HOH HOH . D 4 HOH A 102 384 105 HOH HOH . D 4 HOH A 103 385 106 HOH HOH . D 4 HOH A 104 386 108 HOH HOH . D 4 HOH A 105 387 111 HOH HOH . D 4 HOH A 106 388 112 HOH HOH . D 4 HOH A 107 389 113 HOH HOH . D 4 HOH A 108 390 114 HOH HOH . D 4 HOH A 109 391 115 HOH HOH . D 4 HOH A 110 392 116 HOH HOH . D 4 HOH A 111 393 117 HOH HOH . D 4 HOH A 112 394 120 HOH HOH . D 4 HOH A 113 395 121 HOH HOH . D 4 HOH A 114 396 123 HOH HOH . D 4 HOH A 115 397 124 HOH HOH . D 4 HOH A 116 398 125 HOH HOH . D 4 HOH A 117 399 126 HOH HOH . D 4 HOH A 118 400 127 HOH HOH . D 4 HOH A 119 401 128 HOH HOH . D 4 HOH A 120 402 129 HOH HOH . D 4 HOH A 121 403 130 HOH HOH . D 4 HOH A 122 404 132 HOH HOH . D 4 HOH A 123 405 133 HOH HOH . D 4 HOH A 124 406 135 HOH HOH . D 4 HOH A 125 407 136 HOH HOH . D 4 HOH A 126 408 137 HOH HOH . D 4 HOH A 127 409 139 HOH HOH . D 4 HOH A 128 410 140 HOH HOH . D 4 HOH A 129 411 141 HOH HOH . D 4 HOH A 130 412 142 HOH HOH . D 4 HOH A 131 413 143 HOH HOH . D 4 HOH A 132 414 145 HOH HOH . D 4 HOH A 133 415 146 HOH HOH . D 4 HOH A 134 416 147 HOH HOH . D 4 HOH A 135 417 148 HOH HOH . D 4 HOH A 136 418 149 HOH HOH . D 4 HOH A 137 419 150 HOH HOH . D 4 HOH A 138 420 2 HOH HOH . D 4 HOH A 139 421 4 HOH HOH . D 4 HOH A 140 422 5 HOH HOH . D 4 HOH A 141 423 6 HOH HOH . D 4 HOH A 142 424 7 HOH HOH . D 4 HOH A 143 425 8 HOH HOH . D 4 HOH A 144 426 10 HOH HOH . D 4 HOH A 145 427 11 HOH HOH . D 4 HOH A 146 428 1 HOH HOH . D 4 HOH A 147 429 2 HOH HOH . D 4 HOH A 148 430 1 HOH HOH . D 4 HOH A 149 431 2 HOH HOH . D 4 HOH A 150 432 3 HOH HOH . D 4 HOH A 151 433 4 HOH HOH . D 4 HOH A 152 434 5 HOH HOH . D 4 HOH A 153 435 6 HOH HOH . D 4 HOH A 154 436 7 HOH HOH . D 4 HOH A 155 437 8 HOH HOH . D 4 HOH A 156 438 9 HOH HOH . D 4 HOH A 157 439 10 HOH HOH . D 4 HOH A 158 440 11 HOH HOH . D 4 HOH A 159 441 12 HOH HOH . D 4 HOH A 160 442 14 HOH HOH . D 4 HOH A 161 443 15 HOH HOH . D 4 HOH A 162 444 16 HOH HOH . D 4 HOH A 163 445 1 HOH HOH . D 4 HOH A 164 446 2 HOH HOH . D 4 HOH A 165 447 1 HOH HOH . D 4 HOH A 166 448 1 HOH HOH . D 4 HOH A 167 449 1 HOH HOH . D 4 HOH A 168 450 2 HOH HOH . D 4 HOH A 169 451 3 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.431 _atom_site.Cartn_y 28.141 _atom_site.Cartn_z 17.934 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 282 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #