data_3IC1 # _model_server_result.job_id 97ZOhmWfHce8Wf0lZGFrDA _model_server_result.datetime_utc '2025-01-11 03:34:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ic1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1001}' # _entry.id 3IC1 # _exptl.entry_id 3IC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IC1 _cell.length_a 44.697 _cell.length_b 95.751 _cell.length_c 185.426 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 67 A HIS 67 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A OD1 ASP 100 A ASP 100 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc3 A OD2 ASP 100 A ASP 100 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc4 A OE1 GLU 135 A GLU 135 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc5 A OE2 GLU 135 A GLU 135 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc6 A OE2 GLU 163 A GLU 163 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc7 A OE1 GLU 163 A GLU 163 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc8 A NE2 HIS 349 A HIS 349 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc9 N O HOH . A HOH 482 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc10 N O HOH . A HOH 482 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc11 B NE2 HIS 67 B HIS 67 1_555 M ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc12 B OD2 ASP 100 B ASP 100 1_555 M ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc13 B OD1 ASP 100 B ASP 100 1_555 L ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc14 B OE1 GLU 135 B GLU 135 1_555 L ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc15 B OE2 GLU 135 B GLU 135 1_555 L ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc16 B OE2 GLU 163 B GLU 163 1_555 M ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc17 B OE1 GLU 163 B GLU 163 1_555 M ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc18 B NE2 HIS 349 B HIS 349 1_555 L ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc19 O O HOH . B HOH 479 1_555 M ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc20 O O HOH . B HOH 479 1_555 L ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IC1 _atom_sites.fract_transf_matrix[1][1] 0.022373 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005393 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 1001 ZN ZN . D 2 ZN A 1 1002 1002 ZN ZN . E 3 GOL A 1 3002 3002 GOL GOL . F 4 SO4 A 1 378 378 SO4 SO4 . G 4 SO4 A 1 379 379 SO4 SO4 . H 3 GOL B 1 3001 3001 GOL GOL . I 4 SO4 B 1 378 378 SO4 SO4 . J 4 SO4 B 1 379 379 SO4 SO4 . K 4 SO4 B 1 380 380 SO4 SO4 . L 2 ZN B 1 1002 1002 ZN ZN . M 2 ZN B 1 1001 1001 ZN ZN . N 5 HOH A 1 380 380 HOH HOH . N 5 HOH A 2 381 381 HOH HOH . N 5 HOH A 3 382 382 HOH HOH . N 5 HOH A 4 383 383 HOH HOH . N 5 HOH A 5 384 384 HOH HOH . N 5 HOH A 6 385 385 HOH HOH . N 5 HOH A 7 386 386 HOH HOH . N 5 HOH A 8 387 387 HOH HOH . N 5 HOH A 9 388 388 HOH HOH . N 5 HOH A 10 389 389 HOH HOH . N 5 HOH A 11 390 390 HOH HOH . N 5 HOH A 12 391 391 HOH HOH . N 5 HOH A 13 392 392 HOH HOH . N 5 HOH A 14 393 393 HOH HOH . N 5 HOH A 15 394 394 HOH HOH . N 5 HOH A 16 395 395 HOH HOH . N 5 HOH A 17 396 396 HOH HOH . N 5 HOH A 18 397 397 HOH HOH . N 5 HOH A 19 398 398 HOH HOH . N 5 HOH A 20 399 399 HOH HOH . N 5 HOH A 21 400 400 HOH HOH . N 5 HOH A 22 401 401 HOH HOH . N 5 HOH A 23 402 402 HOH HOH . N 5 HOH A 24 403 403 HOH HOH . N 5 HOH A 25 404 404 HOH HOH . N 5 HOH A 26 405 405 HOH HOH . N 5 HOH A 27 406 406 HOH HOH . N 5 HOH A 28 407 407 HOH HOH . N 5 HOH A 29 408 408 HOH HOH . N 5 HOH A 30 409 409 HOH HOH . N 5 HOH A 31 410 410 HOH HOH . N 5 HOH A 32 411 411 HOH HOH . N 5 HOH A 33 412 412 HOH HOH . N 5 HOH A 34 413 413 HOH HOH . N 5 HOH A 35 414 414 HOH HOH . N 5 HOH A 36 415 415 HOH HOH . N 5 HOH A 37 416 416 HOH HOH . N 5 HOH A 38 417 417 HOH HOH . N 5 HOH A 39 418 418 HOH HOH . N 5 HOH A 40 419 419 HOH HOH . N 5 HOH A 41 420 420 HOH HOH . N 5 HOH A 42 421 421 HOH HOH . N 5 HOH A 43 422 422 HOH HOH . N 5 HOH A 44 423 423 HOH HOH . N 5 HOH A 45 424 424 HOH HOH . N 5 HOH A 46 425 425 HOH HOH . N 5 HOH A 47 426 426 HOH HOH . N 5 HOH A 48 427 427 HOH HOH . N 5 HOH A 49 428 428 HOH HOH . N 5 HOH A 50 429 429 HOH HOH . N 5 HOH A 51 430 430 HOH HOH . N 5 HOH A 52 431 431 HOH HOH . N 5 HOH A 53 432 432 HOH HOH . N 5 HOH A 54 433 433 HOH HOH . N 5 HOH A 55 434 434 HOH HOH . N 5 HOH A 56 435 435 HOH HOH . N 5 HOH A 57 436 436 HOH HOH . N 5 HOH A 58 437 437 HOH HOH . N 5 HOH A 59 438 438 HOH HOH . N 5 HOH A 60 439 439 HOH HOH . N 5 HOH A 61 440 440 HOH HOH . N 5 HOH A 62 441 441 HOH HOH . N 5 HOH A 63 442 442 HOH HOH . N 5 HOH A 64 443 443 HOH HOH . N 5 HOH A 65 444 444 HOH HOH . N 5 HOH A 66 445 445 HOH HOH . N 5 HOH A 67 446 446 HOH HOH . N 5 HOH A 68 447 447 HOH HOH . N 5 HOH A 69 448 448 HOH HOH . N 5 HOH A 70 449 449 HOH HOH . N 5 HOH A 71 450 450 HOH HOH . N 5 HOH A 72 451 451 HOH HOH . N 5 HOH A 73 452 452 HOH HOH . N 5 HOH A 74 453 453 HOH HOH . N 5 HOH A 75 454 454 HOH HOH . N 5 HOH A 76 455 455 HOH HOH . N 5 HOH A 77 456 456 HOH HOH . N 5 HOH A 78 457 457 HOH HOH . N 5 HOH A 79 458 458 HOH HOH . N 5 HOH A 80 459 459 HOH HOH . N 5 HOH A 81 460 460 HOH HOH . N 5 HOH A 82 461 461 HOH HOH . N 5 HOH A 83 462 462 HOH HOH . N 5 HOH A 84 463 463 HOH HOH . N 5 HOH A 85 464 464 HOH HOH . N 5 HOH A 86 465 465 HOH HOH . N 5 HOH A 87 466 466 HOH HOH . N 5 HOH A 88 467 467 HOH HOH . N 5 HOH A 89 468 468 HOH HOH . N 5 HOH A 90 469 469 HOH HOH . N 5 HOH A 91 470 470 HOH HOH . N 5 HOH A 92 471 471 HOH HOH . N 5 HOH A 93 472 472 HOH HOH . N 5 HOH A 94 473 473 HOH HOH . N 5 HOH A 95 474 474 HOH HOH . N 5 HOH A 96 475 475 HOH HOH . N 5 HOH A 97 476 476 HOH HOH . N 5 HOH A 98 477 477 HOH HOH . N 5 HOH A 99 478 478 HOH HOH . N 5 HOH A 100 479 479 HOH HOH . N 5 HOH A 101 480 480 HOH HOH . N 5 HOH A 102 481 481 HOH HOH . N 5 HOH A 103 482 482 HOH HOH . N 5 HOH A 104 483 483 HOH HOH . N 5 HOH A 105 484 484 HOH HOH . N 5 HOH A 106 485 485 HOH HOH . O 5 HOH B 1 381 381 HOH HOH . O 5 HOH B 2 382 382 HOH HOH . O 5 HOH B 3 383 383 HOH HOH . O 5 HOH B 4 384 384 HOH HOH . O 5 HOH B 5 385 385 HOH HOH . O 5 HOH B 6 386 386 HOH HOH . O 5 HOH B 7 387 387 HOH HOH . O 5 HOH B 8 388 388 HOH HOH . O 5 HOH B 9 389 389 HOH HOH . O 5 HOH B 10 390 390 HOH HOH . O 5 HOH B 11 391 391 HOH HOH . O 5 HOH B 12 392 392 HOH HOH . O 5 HOH B 13 393 393 HOH HOH . O 5 HOH B 14 394 394 HOH HOH . O 5 HOH B 15 395 395 HOH HOH . O 5 HOH B 16 396 396 HOH HOH . O 5 HOH B 17 397 397 HOH HOH . O 5 HOH B 18 398 398 HOH HOH . O 5 HOH B 19 399 399 HOH HOH . O 5 HOH B 20 400 400 HOH HOH . O 5 HOH B 21 401 401 HOH HOH . O 5 HOH B 22 402 402 HOH HOH . O 5 HOH B 23 403 403 HOH HOH . O 5 HOH B 24 404 404 HOH HOH . O 5 HOH B 25 405 405 HOH HOH . O 5 HOH B 26 406 406 HOH HOH . O 5 HOH B 27 407 407 HOH HOH . O 5 HOH B 28 408 408 HOH HOH . O 5 HOH B 29 409 409 HOH HOH . O 5 HOH B 30 410 410 HOH HOH . O 5 HOH B 31 411 411 HOH HOH . O 5 HOH B 32 412 412 HOH HOH . O 5 HOH B 33 413 413 HOH HOH . O 5 HOH B 34 414 414 HOH HOH . O 5 HOH B 35 415 415 HOH HOH . O 5 HOH B 36 416 416 HOH HOH . O 5 HOH B 37 417 417 HOH HOH . O 5 HOH B 38 418 418 HOH HOH . O 5 HOH B 39 419 419 HOH HOH . O 5 HOH B 40 420 420 HOH HOH . O 5 HOH B 41 421 421 HOH HOH . O 5 HOH B 42 422 422 HOH HOH . O 5 HOH B 43 423 423 HOH HOH . O 5 HOH B 44 424 424 HOH HOH . O 5 HOH B 45 425 425 HOH HOH . O 5 HOH B 46 426 426 HOH HOH . O 5 HOH B 47 427 427 HOH HOH . O 5 HOH B 48 428 428 HOH HOH . O 5 HOH B 49 429 429 HOH HOH . O 5 HOH B 50 430 430 HOH HOH . O 5 HOH B 51 431 431 HOH HOH . O 5 HOH B 52 432 432 HOH HOH . O 5 HOH B 53 433 433 HOH HOH . O 5 HOH B 54 434 434 HOH HOH . O 5 HOH B 55 435 435 HOH HOH . O 5 HOH B 56 436 436 HOH HOH . O 5 HOH B 57 437 437 HOH HOH . O 5 HOH B 58 438 438 HOH HOH . O 5 HOH B 59 439 439 HOH HOH . O 5 HOH B 60 440 440 HOH HOH . O 5 HOH B 61 441 441 HOH HOH . O 5 HOH B 62 442 442 HOH HOH . O 5 HOH B 63 443 443 HOH HOH . O 5 HOH B 64 444 444 HOH HOH . O 5 HOH B 65 445 445 HOH HOH . O 5 HOH B 66 446 446 HOH HOH . O 5 HOH B 67 447 447 HOH HOH . O 5 HOH B 68 448 448 HOH HOH . O 5 HOH B 69 449 449 HOH HOH . O 5 HOH B 70 450 450 HOH HOH . O 5 HOH B 71 451 451 HOH HOH . O 5 HOH B 72 452 452 HOH HOH . O 5 HOH B 73 453 453 HOH HOH . O 5 HOH B 74 454 454 HOH HOH . O 5 HOH B 75 455 455 HOH HOH . O 5 HOH B 76 456 456 HOH HOH . O 5 HOH B 77 457 457 HOH HOH . O 5 HOH B 78 458 458 HOH HOH . O 5 HOH B 79 459 459 HOH HOH . O 5 HOH B 80 460 460 HOH HOH . O 5 HOH B 81 461 461 HOH HOH . O 5 HOH B 82 462 462 HOH HOH . O 5 HOH B 83 463 463 HOH HOH . O 5 HOH B 84 464 464 HOH HOH . O 5 HOH B 85 465 465 HOH HOH . O 5 HOH B 86 466 466 HOH HOH . O 5 HOH B 87 467 467 HOH HOH . O 5 HOH B 88 468 468 HOH HOH . O 5 HOH B 89 469 469 HOH HOH . O 5 HOH B 90 470 470 HOH HOH . O 5 HOH B 91 471 471 HOH HOH . O 5 HOH B 92 472 472 HOH HOH . O 5 HOH B 93 473 473 HOH HOH . O 5 HOH B 94 474 474 HOH HOH . O 5 HOH B 95 475 475 HOH HOH . O 5 HOH B 96 476 476 HOH HOH . O 5 HOH B 97 477 477 HOH HOH . O 5 HOH B 98 478 478 HOH HOH . O 5 HOH B 99 479 479 HOH HOH . O 5 HOH B 100 480 480 HOH HOH . O 5 HOH B 101 481 481 HOH HOH . O 5 HOH B 102 482 482 HOH HOH . O 5 HOH B 103 483 483 HOH HOH . O 5 HOH B 104 484 484 HOH HOH . O 5 HOH B 105 485 485 HOH HOH . O 5 HOH B 106 486 486 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 2 _atom_site.Cartn_x -19.97 _atom_site.Cartn_y -18.985 _atom_site.Cartn_z -28.843 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #