data_3IF7 # _model_server_result.job_id 7NlPUl1qsCFdj9GCZ_FTug _model_server_result.datetime_utc '2024-12-26 12:42:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3if7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":149}' # _entry.id 3IF7 # _exptl.entry_id 3IF7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3IF7 _cell.length_a 39.669 _cell.length_b 39.669 _cell.length_c 170.34 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IF7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 20 A ASP 20 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc2 A OD1 ASP 22 A ASP 22 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A OD1 ASP 24 A ASP 24 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc4 A O THR 26 A THR 26 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc5 A OE1 GLU 31 A GLU 31 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc6 A OE2 GLU 31 A GLU 31 1_555 B CA CA . A CA 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc7 A OD1 ASP 56 A ASP 56 1_555 C CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc8 A OD1 ASP 58 A ASP 58 1_555 C CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc9 A OD1 ASN 60 A ASN 60 1_555 C CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc10 A O THR 62 A THR 62 1_555 C CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc11 A OE1 GLU 67 A GLU 67 1_555 C CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc12 A OE2 GLU 67 A GLU 67 1_555 C CA CA . A CA 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc13 A OD1 ASP 93 A ASP 93 1_555 D CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc14 A OD1 ASP 95 A ASP 95 1_555 D CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc15 A OD1 ASN 97 A ASN 97 1_555 D CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc16 A O TYR 99 A TYR 99 1_555 D CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc17 A OE1 GLU 104 A GLU 104 1_555 D CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc18 A OE2 GLU 104 A GLU 104 1_555 D CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc19 A OD1 ASP 129 A ASP 129 1_555 E CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc20 A OD1 ASP 131 A ASP 131 1_555 E CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc21 A OD1 ASP 133 A ASP 133 1_555 E CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc22 A O GLN 135 A GLN 135 1_555 E CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc23 A OE1 GLU 140 A GLU 140 1_555 E CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc24 A OE2 GLU 140 A GLU 140 1_555 E CA CA . A CA 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc25 B CA CA . A CA 149 1_555 J O HOH . A HOH 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc26 C CA CA . A CA 150 1_555 J O HOH . A HOH 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc27 D CA CA . A CA 151 1_555 J O HOH . A HOH 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc28 E CA CA . A CA 152 1_555 J O HOH . A HOH 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IF7 _atom_sites.fract_transf_matrix[1][1] 0.025209 _atom_sites.fract_transf_matrix[1][2] 0.014554 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 149 149 CA CA . C 2 CA A 1 150 150 CA CA . D 2 CA A 1 151 151 CA CA . E 2 CA A 1 152 152 CA CA . F 3 SPU A 1 153 1 SPU SPU . G 3 SPU A 1 154 2 SPU SPU . H 3 SPU A 1 155 3 SPU SPU . I 3 SPU A 1 156 4 SPU SPU . J 4 HOH A 1 157 1 HOH HOH . J 4 HOH A 2 158 2 HOH HOH . J 4 HOH A 3 159 3 HOH HOH . J 4 HOH A 4 160 4 HOH HOH . J 4 HOH A 5 161 5 HOH HOH . J 4 HOH A 6 162 6 HOH HOH . J 4 HOH A 7 163 7 HOH HOH . J 4 HOH A 8 164 8 HOH HOH . J 4 HOH A 9 165 9 HOH HOH . J 4 HOH A 10 166 10 HOH HOH . J 4 HOH A 11 167 11 HOH HOH . J 4 HOH A 12 168 12 HOH HOH . J 4 HOH A 13 169 13 HOH HOH . J 4 HOH A 14 170 14 HOH HOH . J 4 HOH A 15 171 15 HOH HOH . J 4 HOH A 16 172 16 HOH HOH . J 4 HOH A 17 173 17 HOH HOH . J 4 HOH A 18 174 18 HOH HOH . J 4 HOH A 19 175 19 HOH HOH . J 4 HOH A 20 176 20 HOH HOH . J 4 HOH A 21 177 21 HOH HOH . J 4 HOH A 22 178 22 HOH HOH . J 4 HOH A 23 179 23 HOH HOH . J 4 HOH A 24 180 24 HOH HOH . J 4 HOH A 25 181 25 HOH HOH . J 4 HOH A 26 182 26 HOH HOH . J 4 HOH A 27 183 27 HOH HOH . J 4 HOH A 28 184 28 HOH HOH . J 4 HOH A 29 185 29 HOH HOH . J 4 HOH A 30 186 30 HOH HOH . J 4 HOH A 31 187 31 HOH HOH . J 4 HOH A 32 188 32 HOH HOH . J 4 HOH A 33 189 33 HOH HOH . J 4 HOH A 34 190 34 HOH HOH . J 4 HOH A 35 191 35 HOH HOH . J 4 HOH A 36 192 36 HOH HOH . J 4 HOH A 37 193 37 HOH HOH . J 4 HOH A 38 194 38 HOH HOH . J 4 HOH A 39 195 39 HOH HOH . J 4 HOH A 40 196 40 HOH HOH . J 4 HOH A 41 197 41 HOH HOH . J 4 HOH A 42 198 42 HOH HOH . J 4 HOH A 43 199 43 HOH HOH . J 4 HOH A 44 200 44 HOH HOH . J 4 HOH A 45 201 45 HOH HOH . J 4 HOH A 46 202 46 HOH HOH . J 4 HOH A 47 203 47 HOH HOH . J 4 HOH A 48 204 48 HOH HOH . J 4 HOH A 49 205 49 HOH HOH . J 4 HOH A 50 206 50 HOH HOH . J 4 HOH A 51 207 51 HOH HOH . J 4 HOH A 52 208 52 HOH HOH . J 4 HOH A 53 209 53 HOH HOH . J 4 HOH A 54 210 54 HOH HOH . J 4 HOH A 55 211 55 HOH HOH . J 4 HOH A 56 212 56 HOH HOH . J 4 HOH A 57 213 57 HOH HOH . J 4 HOH A 58 214 58 HOH HOH . J 4 HOH A 59 215 59 HOH HOH . J 4 HOH A 60 216 60 HOH HOH . J 4 HOH A 61 217 61 HOH HOH . J 4 HOH A 62 218 62 HOH HOH . J 4 HOH A 63 219 63 HOH HOH . J 4 HOH A 64 220 64 HOH HOH . J 4 HOH A 65 221 65 HOH HOH . J 4 HOH A 66 222 66 HOH HOH . J 4 HOH A 67 223 67 HOH HOH . J 4 HOH A 68 224 68 HOH HOH . J 4 HOH A 69 225 69 HOH HOH . J 4 HOH A 70 226 70 HOH HOH . J 4 HOH A 71 227 71 HOH HOH . J 4 HOH A 72 228 72 HOH HOH . J 4 HOH A 73 229 73 HOH HOH . J 4 HOH A 74 230 74 HOH HOH . J 4 HOH A 75 231 75 HOH HOH . J 4 HOH A 76 232 76 HOH HOH . J 4 HOH A 77 233 77 HOH HOH . J 4 HOH A 78 234 78 HOH HOH . J 4 HOH A 79 235 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -42.839 _atom_site.Cartn_y 21.821 _atom_site.Cartn_z -9.766 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 149 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #