data_3IFZ # _model_server_result.job_id lDKTItIlztORtttuhwgNSQ _model_server_result.datetime_utc '2024-12-22 01:35:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ifz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":510}' # _entry.id 3IFZ # _exptl.entry_id 3IFZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.4 _cell.angle_gamma 90 _cell.entry_id 3IFZ _cell.length_a 163.915 _cell.length_b 109.66 _cell.length_c 101.996 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IFZ _atom_sites.fract_transf_matrix[1][1] 0.006101 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003579 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPD A 1 509 502 MPD MPD . D 3 NA A 1 510 503 NA NA . E 2 MPD B 1 509 502 MPD MPD . F 3 NA B 1 510 503 NA NA . G 4 HOH A 1 511 511 HOH HOH . G 4 HOH A 2 512 512 HOH HOH . G 4 HOH A 3 513 513 HOH HOH . G 4 HOH A 4 514 514 HOH HOH . G 4 HOH A 5 515 515 HOH HOH . G 4 HOH A 6 516 516 HOH HOH . G 4 HOH A 7 517 517 HOH HOH . G 4 HOH A 8 518 518 HOH HOH . G 4 HOH A 9 519 519 HOH HOH . G 4 HOH A 10 520 520 HOH HOH . G 4 HOH A 11 521 521 HOH HOH . G 4 HOH A 12 522 522 HOH HOH . G 4 HOH A 13 523 523 HOH HOH . G 4 HOH A 14 524 524 HOH HOH . G 4 HOH A 15 525 525 HOH HOH . G 4 HOH A 16 526 526 HOH HOH . G 4 HOH A 17 527 527 HOH HOH . G 4 HOH A 18 528 528 HOH HOH . G 4 HOH A 19 529 529 HOH HOH . G 4 HOH A 20 530 530 HOH HOH . G 4 HOH A 21 531 531 HOH HOH . G 4 HOH A 22 532 532 HOH HOH . G 4 HOH A 23 533 533 HOH HOH . G 4 HOH A 24 534 534 HOH HOH . G 4 HOH A 25 535 535 HOH HOH . G 4 HOH A 26 536 536 HOH HOH . G 4 HOH A 27 537 537 HOH HOH . G 4 HOH A 28 538 538 HOH HOH . G 4 HOH A 29 539 539 HOH HOH . G 4 HOH A 30 540 540 HOH HOH . G 4 HOH A 31 541 541 HOH HOH . G 4 HOH A 32 542 542 HOH HOH . G 4 HOH A 33 543 543 HOH HOH . G 4 HOH A 34 544 544 HOH HOH . G 4 HOH A 35 545 545 HOH HOH . G 4 HOH A 36 546 546 HOH HOH . G 4 HOH A 37 547 547 HOH HOH . G 4 HOH A 38 548 548 HOH HOH . G 4 HOH A 39 549 549 HOH HOH . G 4 HOH A 40 550 550 HOH HOH . G 4 HOH A 41 551 551 HOH HOH . G 4 HOH A 42 552 552 HOH HOH . G 4 HOH A 43 553 553 HOH HOH . G 4 HOH A 44 554 554 HOH HOH . G 4 HOH A 45 555 555 HOH HOH . G 4 HOH A 46 556 556 HOH HOH . G 4 HOH A 47 557 557 HOH HOH . G 4 HOH A 48 558 558 HOH HOH . G 4 HOH A 49 559 559 HOH HOH . G 4 HOH A 50 560 560 HOH HOH . G 4 HOH A 51 561 561 HOH HOH . G 4 HOH A 52 562 562 HOH HOH . G 4 HOH A 53 563 563 HOH HOH . G 4 HOH A 54 564 564 HOH HOH . G 4 HOH A 55 565 565 HOH HOH . G 4 HOH A 56 566 566 HOH HOH . G 4 HOH A 57 567 567 HOH HOH . G 4 HOH A 58 568 568 HOH HOH . G 4 HOH A 59 569 569 HOH HOH . G 4 HOH A 60 570 570 HOH HOH . G 4 HOH A 61 571 571 HOH HOH . G 4 HOH A 62 572 572 HOH HOH . G 4 HOH A 63 573 573 HOH HOH . G 4 HOH A 64 574 574 HOH HOH . G 4 HOH A 65 575 575 HOH HOH . G 4 HOH A 66 576 576 HOH HOH . G 4 HOH A 67 577 577 HOH HOH . G 4 HOH A 68 578 578 HOH HOH . G 4 HOH A 69 579 579 HOH HOH . G 4 HOH A 70 580 580 HOH HOH . G 4 HOH A 71 581 581 HOH HOH . G 4 HOH A 72 582 582 HOH HOH . G 4 HOH A 73 583 583 HOH HOH . G 4 HOH A 74 584 584 HOH HOH . G 4 HOH A 75 585 585 HOH HOH . G 4 HOH A 76 586 586 HOH HOH . G 4 HOH A 77 587 587 HOH HOH . G 4 HOH A 78 588 588 HOH HOH . G 4 HOH A 79 589 589 HOH HOH . G 4 HOH A 80 590 590 HOH HOH . G 4 HOH A 81 591 591 HOH HOH . G 4 HOH A 82 592 592 HOH HOH . G 4 HOH A 83 593 593 HOH HOH . G 4 HOH A 84 594 594 HOH HOH . G 4 HOH A 85 595 595 HOH HOH . G 4 HOH A 86 596 596 HOH HOH . G 4 HOH A 87 597 597 HOH HOH . G 4 HOH A 88 598 598 HOH HOH . G 4 HOH A 89 599 599 HOH HOH . G 4 HOH A 90 600 600 HOH HOH . G 4 HOH A 91 601 601 HOH HOH . G 4 HOH A 92 602 602 HOH HOH . G 4 HOH A 93 603 504 HOH HOH . G 4 HOH A 94 604 604 HOH HOH . G 4 HOH A 95 605 605 HOH HOH . G 4 HOH A 96 606 606 HOH HOH . G 4 HOH A 97 607 607 HOH HOH . G 4 HOH A 98 608 608 HOH HOH . G 4 HOH A 99 609 505 HOH HOH . G 4 HOH A 100 610 506 HOH HOH . G 4 HOH A 101 611 507 HOH HOH . G 4 HOH A 102 612 508 HOH HOH . G 4 HOH A 103 613 509 HOH HOH . G 4 HOH A 104 614 510 HOH HOH . H 4 HOH B 1 511 511 HOH HOH . H 4 HOH B 2 512 512 HOH HOH . H 4 HOH B 3 513 513 HOH HOH . H 4 HOH B 4 514 514 HOH HOH . H 4 HOH B 5 515 515 HOH HOH . H 4 HOH B 6 516 516 HOH HOH . H 4 HOH B 7 517 517 HOH HOH . H 4 HOH B 8 518 518 HOH HOH . H 4 HOH B 9 519 519 HOH HOH . H 4 HOH B 10 520 520 HOH HOH . H 4 HOH B 11 521 521 HOH HOH . H 4 HOH B 12 522 522 HOH HOH . H 4 HOH B 13 523 523 HOH HOH . H 4 HOH B 14 524 524 HOH HOH . H 4 HOH B 15 525 525 HOH HOH . H 4 HOH B 16 526 526 HOH HOH . H 4 HOH B 17 527 527 HOH HOH . H 4 HOH B 18 528 528 HOH HOH . H 4 HOH B 19 529 529 HOH HOH . H 4 HOH B 20 530 530 HOH HOH . H 4 HOH B 21 531 531 HOH HOH . H 4 HOH B 22 532 532 HOH HOH . H 4 HOH B 23 533 533 HOH HOH . H 4 HOH B 24 534 534 HOH HOH . H 4 HOH B 25 535 535 HOH HOH . H 4 HOH B 26 536 536 HOH HOH . H 4 HOH B 27 537 537 HOH HOH . H 4 HOH B 28 538 538 HOH HOH . H 4 HOH B 29 539 539 HOH HOH . H 4 HOH B 30 540 540 HOH HOH . H 4 HOH B 31 541 541 HOH HOH . H 4 HOH B 32 542 542 HOH HOH . H 4 HOH B 33 543 543 HOH HOH . H 4 HOH B 34 544 544 HOH HOH . H 4 HOH B 35 545 545 HOH HOH . H 4 HOH B 36 546 546 HOH HOH . H 4 HOH B 37 547 547 HOH HOH . H 4 HOH B 38 548 548 HOH HOH . H 4 HOH B 39 549 549 HOH HOH . H 4 HOH B 40 550 550 HOH HOH . H 4 HOH B 41 551 551 HOH HOH . H 4 HOH B 42 552 552 HOH HOH . H 4 HOH B 43 553 553 HOH HOH . H 4 HOH B 44 554 554 HOH HOH . H 4 HOH B 45 555 555 HOH HOH . H 4 HOH B 46 556 556 HOH HOH . H 4 HOH B 47 557 557 HOH HOH . H 4 HOH B 48 558 558 HOH HOH . H 4 HOH B 49 559 559 HOH HOH . H 4 HOH B 50 560 560 HOH HOH . H 4 HOH B 51 561 561 HOH HOH . H 4 HOH B 52 562 562 HOH HOH . H 4 HOH B 53 563 563 HOH HOH . H 4 HOH B 54 564 564 HOH HOH . H 4 HOH B 55 565 565 HOH HOH . H 4 HOH B 56 566 566 HOH HOH . H 4 HOH B 57 567 567 HOH HOH . H 4 HOH B 58 568 568 HOH HOH . H 4 HOH B 59 569 569 HOH HOH . H 4 HOH B 60 570 570 HOH HOH . H 4 HOH B 61 571 571 HOH HOH . H 4 HOH B 62 572 572 HOH HOH . H 4 HOH B 63 573 573 HOH HOH . H 4 HOH B 64 574 574 HOH HOH . H 4 HOH B 65 575 575 HOH HOH . H 4 HOH B 66 576 576 HOH HOH . H 4 HOH B 67 577 577 HOH HOH . H 4 HOH B 68 578 578 HOH HOH . H 4 HOH B 69 579 579 HOH HOH . H 4 HOH B 70 580 504 HOH HOH . H 4 HOH B 71 581 581 HOH HOH . H 4 HOH B 72 582 582 HOH HOH . H 4 HOH B 73 583 583 HOH HOH . H 4 HOH B 74 584 584 HOH HOH . H 4 HOH B 75 585 585 HOH HOH . H 4 HOH B 76 586 586 HOH HOH . H 4 HOH B 77 587 587 HOH HOH . H 4 HOH B 78 588 588 HOH HOH . H 4 HOH B 79 589 589 HOH HOH . H 4 HOH B 80 590 590 HOH HOH . H 4 HOH B 81 591 591 HOH HOH . H 4 HOH B 82 592 592 HOH HOH . H 4 HOH B 83 593 593 HOH HOH . H 4 HOH B 84 594 594 HOH HOH . H 4 HOH B 85 595 595 HOH HOH . H 4 HOH B 86 596 596 HOH HOH . H 4 HOH B 87 597 597 HOH HOH . H 4 HOH B 88 598 598 HOH HOH . H 4 HOH B 89 599 599 HOH HOH . H 4 HOH B 90 600 600 HOH HOH . H 4 HOH B 91 601 601 HOH HOH . H 4 HOH B 92 602 602 HOH HOH . H 4 HOH B 93 603 603 HOH HOH . H 4 HOH B 94 604 604 HOH HOH . H 4 HOH B 95 605 605 HOH HOH . H 4 HOH B 96 606 606 HOH HOH . H 4 HOH B 97 607 607 HOH HOH . H 4 HOH B 98 608 608 HOH HOH . H 4 HOH B 99 609 609 HOH HOH . H 4 HOH B 100 610 610 HOH HOH . H 4 HOH B 101 611 611 HOH HOH . H 4 HOH B 102 612 612 HOH HOH . H 4 HOH B 103 613 613 HOH HOH . H 4 HOH B 104 614 614 HOH HOH . H 4 HOH B 105 615 615 HOH HOH . H 4 HOH B 106 616 616 HOH HOH . H 4 HOH B 107 617 617 HOH HOH . H 4 HOH B 108 618 618 HOH HOH . H 4 HOH B 109 619 619 HOH HOH . H 4 HOH B 110 620 620 HOH HOH . H 4 HOH B 111 621 621 HOH HOH . H 4 HOH B 112 622 622 HOH HOH . H 4 HOH B 113 623 505 HOH HOH . H 4 HOH B 114 624 506 HOH HOH . H 4 HOH B 115 625 507 HOH HOH . H 4 HOH B 116 626 508 HOH HOH . H 4 HOH B 117 627 509 HOH HOH . H 4 HOH B 118 628 510 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -42.577 _atom_site.Cartn_y 38.11 _atom_site.Cartn_z 38.081 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 77.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 510 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #