data_3IG1 # _model_server_result.job_id UnTzvsNEap2fEUEydaMGSg _model_server_result.datetime_utc '2025-02-26 09:07:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ig1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 3IG1 # _exptl.entry_id 3IG1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.2 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.13 _cell.angle_gamma 90 _cell.entry_id 3IG1 _cell.length_a 164.057 _cell.length_b 71.3 _cell.length_c 108.541 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IG1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 443 A ASP 443 1_555 D MN MN . A MN 556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc2 A OD1 ASP 443 A ASP 443 1_555 E MN MN . A MN 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc3 A OE2 GLU 478 A GLU 478 1_555 D MN MN . A MN 556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc4 A OE1 GLU 478 A GLU 478 1_555 D MN MN . A MN 556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc5 A OD1 ASP 498 A ASP 498 1_555 D MN MN . A MN 556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc6 A OD1 ASP 549 A ASP 549 1_555 E MN MN . A MN 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc7 D MN MN . A MN 556 1_555 C O1 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc8 D MN MN . A MN 556 1_555 C O7 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc9 E MN MN . A MN 557 1_555 C O1 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc10 E MN MN . A MN 557 1_555 C O2 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'C10 H12 O3' _chem_comp.formula_weight 180.2 _chem_comp.id JTH _chem_comp.mon_nstd_flag . _chem_comp.name 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms beta-thujaplicinol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 JTH sing 173 n n C1 C7 JTH sing 174 n n O1 C1 JTH doub 175 n n C2 C3 JTH doub 176 n n O2 C2 JTH sing 177 n n C3 C4 JTH sing 178 n n C3 H3 JTH sing 179 n n C4 C5 JTH doub 180 n n C4 C42 JTH sing 181 n n C5 H5 JTH sing 182 n n C6 C5 JTH sing 183 n n C6 H6 JTH sing 184 n n C7 C6 JTH doub 185 n n O7 C7 JTH sing 186 n n C41 C42 JTH sing 187 n n C41 H41 JTH sing 188 n n C41 H41A JTH sing 189 n n C41 H41B JTH sing 190 n n C42 C43 JTH sing 191 n n C42 H42 JTH sing 192 n n C43 H43 JTH sing 193 n n C43 H43A JTH sing 194 n n C43 H43B JTH sing 195 n n O2 H11 JTH sing 196 n n O7 H12 JTH sing 197 n n # _atom_sites.entry_id 3IG1 _atom_sites.fract_transf_matrix[1][1] 0.006095 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001648 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014025 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 JTH A 1 1001 1001 JTH JTH . D 4 MN A 1 556 1 MN MN . E 4 MN A 1 557 2 MN MN . F 5 HOH A 1 558 1 HOH WAT . F 5 HOH A 2 559 2 HOH WAT . F 5 HOH A 3 560 3 HOH WAT . F 5 HOH A 4 561 4 HOH WAT . F 5 HOH A 5 562 5 HOH WAT . F 5 HOH A 6 563 6 HOH WAT . F 5 HOH A 7 564 7 HOH WAT . F 5 HOH A 8 565 10 HOH WAT . F 5 HOH A 9 566 11 HOH WAT . F 5 HOH A 10 567 12 HOH WAT . F 5 HOH A 11 568 14 HOH WAT . F 5 HOH A 12 569 15 HOH WAT . F 5 HOH A 13 570 18 HOH WAT . F 5 HOH A 14 571 22 HOH WAT . F 5 HOH A 15 572 23 HOH WAT . F 5 HOH A 16 573 24 HOH WAT . F 5 HOH A 17 574 25 HOH WAT . F 5 HOH A 18 575 26 HOH WAT . F 5 HOH A 19 576 31 HOH WAT . F 5 HOH A 20 577 32 HOH WAT . F 5 HOH A 21 578 33 HOH WAT . F 5 HOH A 22 579 34 HOH WAT . F 5 HOH A 23 580 35 HOH WAT . F 5 HOH A 24 581 37 HOH WAT . F 5 HOH A 25 582 39 HOH WAT . F 5 HOH A 26 583 40 HOH WAT . F 5 HOH A 27 584 41 HOH WAT . F 5 HOH A 28 585 42 HOH WAT . F 5 HOH A 29 586 44 HOH WAT . F 5 HOH A 30 587 45 HOH WAT . F 5 HOH A 31 588 46 HOH WAT . F 5 HOH A 32 589 47 HOH WAT . F 5 HOH A 33 590 48 HOH WAT . F 5 HOH A 34 591 50 HOH WAT . F 5 HOH A 35 592 52 HOH WAT . F 5 HOH A 36 593 53 HOH WAT . F 5 HOH A 37 594 56 HOH WAT . F 5 HOH A 38 595 57 HOH WAT . F 5 HOH A 39 596 59 HOH WAT . F 5 HOH A 40 597 60 HOH WAT . F 5 HOH A 41 598 63 HOH WAT . F 5 HOH A 42 599 64 HOH WAT . F 5 HOH A 43 600 67 HOH WAT . F 5 HOH A 44 601 70 HOH WAT . F 5 HOH A 45 602 73 HOH WAT . F 5 HOH A 46 603 74 HOH WAT . G 5 HOH B 1 429 8 HOH WAT . G 5 HOH B 2 430 9 HOH WAT . G 5 HOH B 3 431 13 HOH WAT . G 5 HOH B 4 432 16 HOH WAT . G 5 HOH B 5 433 17 HOH WAT . G 5 HOH B 6 434 19 HOH WAT . G 5 HOH B 7 435 20 HOH WAT . G 5 HOH B 8 436 21 HOH WAT . G 5 HOH B 9 437 27 HOH WAT . G 5 HOH B 10 438 28 HOH WAT . G 5 HOH B 11 439 29 HOH WAT . G 5 HOH B 12 440 30 HOH WAT . G 5 HOH B 13 441 36 HOH WAT . G 5 HOH B 14 442 38 HOH WAT . G 5 HOH B 15 443 43 HOH WAT . G 5 HOH B 16 444 49 HOH WAT . G 5 HOH B 17 445 51 HOH WAT . G 5 HOH B 18 446 54 HOH WAT . G 5 HOH B 19 447 55 HOH WAT . G 5 HOH B 20 448 58 HOH WAT . G 5 HOH B 21 449 61 HOH WAT . G 5 HOH B 22 450 62 HOH WAT . G 5 HOH B 23 451 65 HOH WAT . G 5 HOH B 24 452 66 HOH WAT . G 5 HOH B 25 453 68 HOH WAT . G 5 HOH B 26 454 69 HOH WAT . G 5 HOH B 27 455 71 HOH WAT . G 5 HOH B 28 456 72 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JTH . . . C 3 11.38 19.483 12.682 1 100.26 ? C1 JTH 1001 A 1 HETATM 2 O O1 JTH . . . C 3 10.8 18.882 11.717 1 92.81 ? O1 JTH 1001 A 1 HETATM 3 C C2 JTH . . . C 3 10.846 20.852 13.02 1 101.69 ? C2 JTH 1001 A 1 HETATM 4 O O2 JTH . . . C 3 9.856 21.16 12.217 1 101.34 ? O2 JTH 1001 A 1 HETATM 5 C C3 JTH . . . C 3 11.199 21.752 13.961 1 105.11 ? C3 JTH 1001 A 1 HETATM 6 C C4 JTH . . . C 3 12.227 21.76 14.999 1 108.12 ? C4 JTH 1001 A 1 HETATM 7 C C5 JTH . . . C 3 13.118 20.728 15.236 1 106.85 ? C5 JTH 1001 A 1 HETATM 8 C C6 JTH . . . C 3 13.239 19.425 14.528 1 102.84 ? C6 JTH 1001 A 1 HETATM 9 C C7 JTH . . . C 3 12.544 18.857 13.461 1 100.42 ? C7 JTH 1001 A 1 HETATM 10 O O7 JTH . . . C 3 12.878 17.611 12.999 1 103.04 ? O7 JTH 1001 A 1 HETATM 11 C C41 JTH . . . C 3 12.309 24.403 15 1 109.16 ? C41 JTH 1001 A 1 HETATM 12 C C42 JTH . . . C 3 12.23 23.063 15.847 1 110.26 ? C42 JTH 1001 A 1 HETATM 13 C C43 JTH . . . C 3 10.947 23.141 16.777 1 112.48 ? C43 JTH 1001 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 77 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 1394 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #