data_3IG8 # _model_server_result.job_id L0tjt-2bmweZ6pgtYOUiaw _model_server_result.datetime_utc '2025-01-09 03:42:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ig8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":693}' # _entry.id 3IG8 # _exptl.entry_id 3IG8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IG8 _cell.length_a 117.849 _cell.length_b 117.849 _cell.length_c 164.444 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IG8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 50 A GLU 50 1_555 E MG MG . A MG 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc2 A OE2 GLU 50 A GLU 50 1_555 E MG MG . A MG 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc3 A OE2 GLU 50 A GLU 50 1_555 F MG MG . A MG 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc4 A OE2 GLU 52 A GLU 52 1_555 D MG MG . A MG 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc5 A OE2 GLU 96 A GLU 96 1_555 D MG MG . A MG 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc6 A OE1 GLU 103 A GLU 103 1_555 D MG MG . A MG 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc7 A OE2 GLU 103 A GLU 103 1_555 F MG MG . A MG 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc8 A OE1 GLN 268 A GLN 268 1_555 E MG MG . A MG 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc9 A OE2 GLU 470 A GLU 470 1_555 E MG MG . A MG 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc10 B OE2 GLU . A GLU 693 1_555 D MG MG . A MG 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc11 C O2B ADP . A ADP 694 1_555 E MG MG . A MG 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc12 C O3B ADP . A ADP 694 1_555 F MG MG . A MG 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc13 C O2A ADP . A ADP 694 1_555 F MG MG . A MG 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc14 F MG MG . A MG 697 1_555 H O HOH . A HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLU sing 146 n n N H GLU sing 147 n n N H2 GLU sing 148 n n CA C GLU sing 149 n n CA CB GLU sing 150 n n CA HA GLU sing 151 n n C O GLU doub 152 n n C OXT GLU sing 153 n n CB CG GLU sing 154 n n CB HB2 GLU sing 155 n n CB HB3 GLU sing 156 n n CG CD GLU sing 157 n n CG HG2 GLU sing 158 n n CG HG3 GLU sing 159 n n CD OE1 GLU doub 160 n n CD OE2 GLU sing 161 n n OE2 HE2 GLU sing 162 n n OXT HXT GLU sing 163 n n # _atom_sites.entry_id 3IG8 _atom_sites.fract_transf_matrix[1][1] 0.008485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLU A 1 693 1 GLU GLU . C 3 ADP A 1 694 2 ADP ADP . D 4 MG A 1 695 4 MG MG . E 4 MG A 1 696 5 MG MG . F 4 MG A 1 697 6 MG MG . G 5 PGE A 1 698 7 PGE PGE . H 6 HOH A 1 699 1 HOH HOH . H 6 HOH A 2 700 2 HOH HOH . H 6 HOH A 3 701 3 HOH HOH . H 6 HOH A 4 702 4 HOH HOH . H 6 HOH A 5 703 5 HOH HOH . H 6 HOH A 6 704 6 HOH HOH . H 6 HOH A 7 705 7 HOH HOH . H 6 HOH A 8 706 8 HOH HOH . H 6 HOH A 9 707 9 HOH HOH . H 6 HOH A 10 708 10 HOH HOH . H 6 HOH A 11 709 11 HOH HOH . H 6 HOH A 12 710 12 HOH HOH . H 6 HOH A 13 711 13 HOH HOH . H 6 HOH A 14 712 14 HOH HOH . H 6 HOH A 15 713 15 HOH HOH . H 6 HOH A 16 714 16 HOH HOH . H 6 HOH A 17 715 17 HOH HOH . H 6 HOH A 18 716 18 HOH HOH . H 6 HOH A 19 717 19 HOH HOH . H 6 HOH A 20 718 20 HOH HOH . H 6 HOH A 21 719 21 HOH HOH . H 6 HOH A 22 720 22 HOH HOH . H 6 HOH A 23 721 23 HOH HOH . H 6 HOH A 24 722 24 HOH HOH . H 6 HOH A 25 723 25 HOH HOH . H 6 HOH A 26 724 26 HOH HOH . H 6 HOH A 27 725 27 HOH HOH . H 6 HOH A 28 726 28 HOH HOH . H 6 HOH A 29 727 29 HOH HOH . H 6 HOH A 30 728 30 HOH HOH . H 6 HOH A 31 729 31 HOH HOH . H 6 HOH A 32 730 32 HOH HOH . H 6 HOH A 33 731 33 HOH HOH . H 6 HOH A 34 732 34 HOH HOH . H 6 HOH A 35 733 35 HOH HOH . H 6 HOH A 36 734 36 HOH HOH . H 6 HOH A 37 735 37 HOH HOH . H 6 HOH A 38 736 38 HOH HOH . H 6 HOH A 39 737 39 HOH HOH . H 6 HOH A 40 738 40 HOH HOH . H 6 HOH A 41 739 41 HOH HOH . H 6 HOH A 42 740 42 HOH HOH . H 6 HOH A 43 741 43 HOH HOH . H 6 HOH A 44 742 44 HOH HOH . H 6 HOH A 45 743 45 HOH HOH . H 6 HOH A 46 744 46 HOH HOH . H 6 HOH A 47 745 47 HOH HOH . H 6 HOH A 48 746 48 HOH HOH . H 6 HOH A 49 747 49 HOH HOH . H 6 HOH A 50 748 50 HOH HOH . H 6 HOH A 51 749 51 HOH HOH . H 6 HOH A 52 750 52 HOH HOH . H 6 HOH A 53 751 53 HOH HOH . H 6 HOH A 54 752 54 HOH HOH . H 6 HOH A 55 753 55 HOH HOH . H 6 HOH A 56 754 56 HOH HOH . H 6 HOH A 57 755 57 HOH HOH . H 6 HOH A 58 756 58 HOH HOH . H 6 HOH A 59 757 59 HOH HOH . H 6 HOH A 60 758 60 HOH HOH . H 6 HOH A 61 759 61 HOH HOH . H 6 HOH A 62 760 62 HOH HOH . H 6 HOH A 63 761 63 HOH HOH . H 6 HOH A 64 762 64 HOH HOH . H 6 HOH A 65 763 65 HOH HOH . H 6 HOH A 66 764 66 HOH HOH . H 6 HOH A 67 765 67 HOH HOH . H 6 HOH A 68 766 68 HOH HOH . H 6 HOH A 69 767 69 HOH HOH . H 6 HOH A 70 768 70 HOH HOH . H 6 HOH A 71 769 71 HOH HOH . H 6 HOH A 72 770 72 HOH HOH . H 6 HOH A 73 771 73 HOH HOH . H 6 HOH A 74 772 74 HOH HOH . H 6 HOH A 75 773 75 HOH HOH . H 6 HOH A 76 774 76 HOH HOH . H 6 HOH A 77 775 77 HOH HOH . H 6 HOH A 78 776 78 HOH HOH . H 6 HOH A 79 777 79 HOH HOH . H 6 HOH A 80 778 80 HOH HOH . H 6 HOH A 81 779 81 HOH HOH . H 6 HOH A 82 780 82 HOH HOH . H 6 HOH A 83 781 83 HOH HOH . H 6 HOH A 84 782 84 HOH HOH . H 6 HOH A 85 783 85 HOH HOH . H 6 HOH A 86 784 86 HOH HOH . H 6 HOH A 87 785 87 HOH HOH . H 6 HOH A 88 786 88 HOH HOH . H 6 HOH A 89 787 89 HOH HOH . H 6 HOH A 90 788 90 HOH HOH . H 6 HOH A 91 789 91 HOH HOH . H 6 HOH A 92 790 92 HOH HOH . H 6 HOH A 93 791 93 HOH HOH . H 6 HOH A 94 792 94 HOH HOH . H 6 HOH A 95 793 95 HOH HOH . H 6 HOH A 96 794 96 HOH HOH . H 6 HOH A 97 795 97 HOH HOH . H 6 HOH A 98 796 98 HOH HOH . H 6 HOH A 99 797 99 HOH HOH . H 6 HOH A 100 798 100 HOH HOH . H 6 HOH A 101 799 101 HOH HOH . H 6 HOH A 102 800 102 HOH HOH . H 6 HOH A 103 801 103 HOH HOH . H 6 HOH A 104 802 104 HOH HOH . H 6 HOH A 105 803 105 HOH HOH . H 6 HOH A 106 804 106 HOH HOH . H 6 HOH A 107 805 107 HOH HOH . H 6 HOH A 108 806 108 HOH HOH . H 6 HOH A 109 807 109 HOH HOH . H 6 HOH A 110 808 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . B 2 35.631 1.504 18.586 1 39.54 ? N GLU 693 A 1 HETATM 2 C CA GLU . . . B 2 35.04 1.133 19.901 1 39.56 ? CA GLU 693 A 1 HETATM 3 C C GLU . . . B 2 35.944 1.295 21.098 1 39.28 ? C GLU 693 A 1 HETATM 4 O O GLU . . . B 2 36.999 1.972 21.064 1 39.08 ? O GLU 693 A 1 HETATM 5 C CB GLU . . . B 2 34.596 -0.301 19.865 1 39.59 ? CB GLU 693 A 1 HETATM 6 C CG GLU . . . B 2 33.183 -0.43 19.406 1 42.77 ? CG GLU 693 A 1 HETATM 7 C CD GLU . . . B 2 33.028 -1.683 18.674 1 46.09 ? CD GLU 693 A 1 HETATM 8 O OE1 GLU . . . B 2 32.383 -2.628 19.205 1 47.32 ? OE1 GLU 693 A 1 HETATM 9 O OE2 GLU . . . B 2 33.631 -1.725 17.579 1 49.63 ? OE2 GLU 693 A 1 HETATM 10 O OXT GLU . . . B 2 35.576 0.713 22.129 1 38.63 ? OXT GLU 693 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #