data_3IGJ
#
_model_server_result.job_id            Twu2OISrvCYoIfcGi69f8w 
_model_server_result.datetime_utc      '2025-04-30 06:35:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3igj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":193}' 
#
_entry.id    3IGJ 
#
_exptl.entry_id    3IGJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3IGJ 
_cell.length_a            121.966 
_cell.length_b            121.966 
_cell.length_c            142.441 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3IGJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 V N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 10 A LYS 7 1_555 A N MSE 11 A MSE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C MSE 11 A MSE 8 1_555 A N LEU 12 A LEU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 A C GLU 15 A GLU 12 1_555 A N MSE 16 A MSE 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 A C MSE 16 A MSE 13 1_555 A N TYR 17 A TYR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale5 A C CYS 105 A CYS 102 1_555 A N MSE 106 A MSE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale6 A C MSE 106 A MSE 103 1_555 A N PHE 107 A PHE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale7 B C MSE 4 B MSE 1 1_555 B N LYS 5 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale8 B C LYS 10 B LYS 7 1_555 B N MSE 11 B MSE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale9 B C MSE 11 B MSE 8 1_555 B N LEU 12 B LEU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale10 B C GLU 15 B GLU 12 1_555 B N MSE 16 B MSE 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale11 B C MSE 16 B MSE 13 1_555 B N TYR 17 B TYR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale12 B C CYS 105 B CYS 102 1_555 B N MSE 106 B MSE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale13 B C MSE 106 B MSE 103 1_555 B N PHE 107 B PHE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale14 C C ALA 3 C ALA 0 1_555 C N MSE 4 C MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale15 C C MSE 4 C MSE 1 1_555 C N LYS 5 C LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale16 C C LYS 10 C LYS 7 1_555 C N MSE 11 C MSE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale17 C C MSE 11 C MSE 8 1_555 C N LEU 12 C LEU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale18 C C GLU 15 C GLU 12 1_555 C N MSE 16 C MSE 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale19 C C MSE 16 C MSE 13 1_555 C N TYR 17 C TYR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale20 C C CYS 105 C CYS 102 1_555 C N MSE 106 C MSE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? 
covale ? covale21 C C MSE 106 C MSE 103 1_555 C N PHE 107 C PHE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 FMT doub 174 n n 
C O2 FMT sing 175 n n 
C H FMT sing 176 n n 
O2 HO2 FMT sing 177 n n 
#
_atom_sites.entry_id                     3IGJ 
_atom_sites.fract_transf_matrix[1][1]    0.008199 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008199 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00702 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ACO A 1 188 1 ACO ACO . 
E 2 ACO A 1 189 3 ACO ACO . 
F 3 SO4 A 1 190 7 SO4 SO4 . 
G 4 GOL A 1 191 10 GOL GOL . 
H 4 GOL A 1 192 11 GOL GOL . 
I 5 FMT A 1 193 13 FMT FMT . 
J 5 FMT A 1 194 15 FMT FMT . 
K 2 ACO B 1 188 2 ACO ACO . 
L 3 SO4 B 1 189 4 SO4 SO4 . 
M 3 SO4 B 1 190 5 SO4 SO4 . 
N 3 SO4 B 1 191 6 SO4 SO4 . 
O 3 SO4 B 1 192 9 SO4 SO4 . 
P 5 FMT B 1 193 14 FMT FMT . 
Q 5 FMT B 1 194 16 FMT FMT . 
R 5 FMT B 1 195 18 FMT FMT . 
S 5 FMT B 1 196 19 FMT FMT . 
T 3 SO4 C 1 188 8 SO4 SO4 . 
U 4 GOL C 1 189 12 GOL GOL . 
V 5 FMT C 1 190 17 FMT FMT . 
W 6 HOH A 1 195 1 HOH HOH . 
W 6 HOH A 2 196 4 HOH HOH . 
W 6 HOH A 3 197 6 HOH HOH . 
W 6 HOH A 4 198 11 HOH HOH . 
W 6 HOH A 5 199 18 HOH HOH . 
W 6 HOH A 6 200 21 HOH HOH . 
W 6 HOH A 7 201 24 HOH HOH . 
W 6 HOH A 8 202 28 HOH HOH . 
W 6 HOH A 9 203 29 HOH HOH . 
W 6 HOH A 10 204 35 HOH HOH . 
W 6 HOH A 11 205 38 HOH HOH . 
W 6 HOH A 12 206 40 HOH HOH . 
W 6 HOH A 13 207 44 HOH HOH . 
W 6 HOH A 14 208 52 HOH HOH . 
W 6 HOH A 15 209 54 HOH HOH . 
W 6 HOH A 16 210 56 HOH HOH . 
W 6 HOH A 17 211 57 HOH HOH . 
W 6 HOH A 18 212 64 HOH HOH . 
W 6 HOH A 19 213 79 HOH HOH . 
W 6 HOH A 20 214 81 HOH HOH . 
W 6 HOH A 21 215 86 HOH HOH . 
W 6 HOH A 22 216 92 HOH HOH . 
W 6 HOH A 23 217 98 HOH HOH . 
W 6 HOH A 24 218 100 HOH HOH . 
W 6 HOH A 25 219 103 HOH HOH . 
W 6 HOH A 26 220 107 HOH HOH . 
W 6 HOH A 27 221 109 HOH HOH . 
W 6 HOH A 28 222 110 HOH HOH . 
W 6 HOH A 29 223 112 HOH HOH . 
W 6 HOH A 30 224 113 HOH HOH . 
W 6 HOH A 31 225 115 HOH HOH . 
W 6 HOH A 32 226 116 HOH HOH . 
W 6 HOH A 33 227 117 HOH HOH . 
W 6 HOH A 34 228 121 HOH HOH . 
W 6 HOH A 35 229 123 HOH HOH . 
W 6 HOH A 36 230 126 HOH HOH . 
W 6 HOH A 37 231 132 HOH HOH . 
W 6 HOH A 38 232 133 HOH HOH . 
W 6 HOH A 39 233 134 HOH HOH . 
W 6 HOH A 40 234 136 HOH HOH . 
W 6 HOH A 41 235 142 HOH HOH . 
W 6 HOH A 42 236 148 HOH HOH . 
W 6 HOH A 43 237 150 HOH HOH . 
W 6 HOH A 44 238 154 HOH HOH . 
W 6 HOH A 45 239 155 HOH HOH . 
W 6 HOH A 46 240 159 HOH HOH . 
W 6 HOH A 47 241 160 HOH HOH . 
W 6 HOH A 48 242 161 HOH HOH . 
W 6 HOH A 49 243 167 HOH HOH . 
W 6 HOH A 50 244 170 HOH HOH . 
W 6 HOH A 51 245 171 HOH HOH . 
W 6 HOH A 52 246 172 HOH HOH . 
W 6 HOH A 53 247 173 HOH HOH . 
W 6 HOH A 54 248 174 HOH HOH . 
X 6 HOH B 1 197 8 HOH HOH . 
X 6 HOH B 2 198 9 HOH HOH . 
X 6 HOH B 3 199 12 HOH HOH . 
X 6 HOH B 4 200 13 HOH HOH . 
X 6 HOH B 5 201 15 HOH HOH . 
X 6 HOH B 6 202 16 HOH HOH . 
X 6 HOH B 7 203 22 HOH HOH . 
X 6 HOH B 8 204 25 HOH HOH . 
X 6 HOH B 9 205 26 HOH HOH . 
X 6 HOH B 10 206 30 HOH HOH . 
X 6 HOH B 11 207 31 HOH HOH . 
X 6 HOH B 12 208 32 HOH HOH . 
X 6 HOH B 13 209 34 HOH HOH . 
X 6 HOH B 14 210 37 HOH HOH . 
X 6 HOH B 15 211 41 HOH HOH . 
X 6 HOH B 16 212 46 HOH HOH . 
X 6 HOH B 17 213 47 HOH HOH . 
X 6 HOH B 18 214 51 HOH HOH . 
X 6 HOH B 19 215 58 HOH HOH . 
X 6 HOH B 20 216 59 HOH HOH . 
X 6 HOH B 21 217 61 HOH HOH . 
X 6 HOH B 22 218 66 HOH HOH . 
X 6 HOH B 23 219 71 HOH HOH . 
X 6 HOH B 24 220 72 HOH HOH . 
X 6 HOH B 25 221 73 HOH HOH . 
X 6 HOH B 26 222 82 HOH HOH . 
X 6 HOH B 27 223 85 HOH HOH . 
X 6 HOH B 28 224 88 HOH HOH . 
X 6 HOH B 29 225 89 HOH HOH . 
X 6 HOH B 30 226 90 HOH HOH . 
X 6 HOH B 31 227 91 HOH HOH . 
X 6 HOH B 32 228 95 HOH HOH . 
X 6 HOH B 33 229 96 HOH HOH . 
X 6 HOH B 34 230 101 HOH HOH . 
X 6 HOH B 35 231 104 HOH HOH . 
X 6 HOH B 36 232 105 HOH HOH . 
X 6 HOH B 37 233 106 HOH HOH . 
X 6 HOH B 38 234 114 HOH HOH . 
X 6 HOH B 39 235 118 HOH HOH . 
X 6 HOH B 40 236 120 HOH HOH . 
X 6 HOH B 41 237 124 HOH HOH . 
X 6 HOH B 42 238 128 HOH HOH . 
X 6 HOH B 43 239 129 HOH HOH . 
X 6 HOH B 44 240 130 HOH HOH . 
X 6 HOH B 45 241 138 HOH HOH . 
X 6 HOH B 46 242 144 HOH HOH . 
X 6 HOH B 47 243 145 HOH HOH . 
X 6 HOH B 48 244 151 HOH HOH . 
X 6 HOH B 49 245 166 HOH HOH . 
X 6 HOH B 50 246 175 HOH HOH . 
X 6 HOH B 51 247 176 HOH HOH . 
Y 6 HOH C 1 191 2 HOH HOH . 
Y 6 HOH C 2 192 3 HOH HOH . 
Y 6 HOH C 3 193 5 HOH HOH . 
Y 6 HOH C 4 194 7 HOH HOH . 
Y 6 HOH C 5 195 10 HOH HOH . 
Y 6 HOH C 6 196 14 HOH HOH . 
Y 6 HOH C 7 197 17 HOH HOH . 
Y 6 HOH C 8 198 19 HOH HOH . 
Y 6 HOH C 9 199 20 HOH HOH . 
Y 6 HOH C 10 200 23 HOH HOH . 
Y 6 HOH C 11 201 27 HOH HOH . 
Y 6 HOH C 12 202 33 HOH HOH . 
Y 6 HOH C 13 203 36 HOH HOH . 
Y 6 HOH C 14 204 39 HOH HOH . 
Y 6 HOH C 15 205 42 HOH HOH . 
Y 6 HOH C 16 206 43 HOH HOH . 
Y 6 HOH C 17 207 45 HOH HOH . 
Y 6 HOH C 18 208 48 HOH HOH . 
Y 6 HOH C 19 209 49 HOH HOH . 
Y 6 HOH C 20 210 50 HOH HOH . 
Y 6 HOH C 21 211 53 HOH HOH . 
Y 6 HOH C 22 212 55 HOH HOH . 
Y 6 HOH C 23 213 60 HOH HOH . 
Y 6 HOH C 24 214 62 HOH HOH . 
Y 6 HOH C 25 215 63 HOH HOH . 
Y 6 HOH C 26 216 65 HOH HOH . 
Y 6 HOH C 27 217 67 HOH HOH . 
Y 6 HOH C 28 218 68 HOH HOH . 
Y 6 HOH C 29 219 69 HOH HOH . 
Y 6 HOH C 30 220 70 HOH HOH . 
Y 6 HOH C 31 221 74 HOH HOH . 
Y 6 HOH C 32 222 75 HOH HOH . 
Y 6 HOH C 33 223 76 HOH HOH . 
Y 6 HOH C 34 224 77 HOH HOH . 
Y 6 HOH C 35 225 78 HOH HOH . 
Y 6 HOH C 36 226 80 HOH HOH . 
Y 6 HOH C 37 227 83 HOH HOH . 
Y 6 HOH C 38 228 84 HOH HOH . 
Y 6 HOH C 39 229 87 HOH HOH . 
Y 6 HOH C 40 230 93 HOH HOH . 
Y 6 HOH C 41 231 94 HOH HOH . 
Y 6 HOH C 42 232 97 HOH HOH . 
Y 6 HOH C 43 233 99 HOH HOH . 
Y 6 HOH C 44 234 102 HOH HOH . 
Y 6 HOH C 45 235 108 HOH HOH . 
Y 6 HOH C 46 236 111 HOH HOH . 
Y 6 HOH C 47 237 119 HOH HOH . 
Y 6 HOH C 48 238 122 HOH HOH . 
Y 6 HOH C 49 239 125 HOH HOH . 
Y 6 HOH C 50 240 127 HOH HOH . 
Y 6 HOH C 51 241 131 HOH HOH . 
Y 6 HOH C 52 242 135 HOH HOH . 
Y 6 HOH C 53 243 137 HOH HOH . 
Y 6 HOH C 54 244 139 HOH HOH . 
Y 6 HOH C 55 245 140 HOH HOH . 
Y 6 HOH C 56 246 141 HOH HOH . 
Y 6 HOH C 57 247 143 HOH HOH . 
Y 6 HOH C 58 248 146 HOH HOH . 
Y 6 HOH C 59 249 147 HOH HOH . 
Y 6 HOH C 60 250 149 HOH HOH . 
Y 6 HOH C 61 251 152 HOH HOH . 
Y 6 HOH C 62 252 153 HOH HOH . 
Y 6 HOH C 63 253 156 HOH HOH . 
Y 6 HOH C 64 254 157 HOH HOH . 
Y 6 HOH C 65 255 158 HOH HOH . 
Y 6 HOH C 66 256 162 HOH HOH . 
Y 6 HOH C 67 257 163 HOH HOH . 
Y 6 HOH C 68 258 164 HOH HOH . 
Y 6 HOH C 69 259 165 HOH HOH . 
Y 6 HOH C 70 260 168 HOH HOH . 
Y 6 HOH C 71 261 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . P 5 72.676 67.391 63.1 1 81.53 ? C FMT 193 B 1 
HETATM 2 O O1 FMT . . . P 5 72.207 68.28 63.824 1 75.59 ? O1 FMT 193 B 1 
HETATM 3 O O2 FMT . . . P 5 72.929 67.507 61.891 1 83.28 ? O2 FMT 193 B 1 
#
_model_server_stats.io_time_ms              84 
_model_server_stats.parse_time_ms           47 
_model_server_stats.create_model_time_ms    97 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           3 
#