data_3II5 # _model_server_result.job_id 7nCnSeSKZGAcXETzu1OZfw _model_server_result.datetime_utc '2025-01-02 16:07:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ii5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3II5 # _exptl.entry_id 3II5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 515.529 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-(3-{4-[(dimethylamino)methyl]phenyl}pyrazolo[1,5-a]pyrimidin-7-yl)phenyl]-3-(trifluoromethyl)benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3II5 _cell.length_a 110.219 _cell.length_b 110.219 _cell.length_c 148.468 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3II5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C29 H24 F3 N5 O' _chem_comp.formula_weight 515.529 _chem_comp.id 831 _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-(3-{4-[(dimethylamino)methyl]phenyl}pyrazolo[1,5-a]pyrimidin-7-yl)phenyl]-3-(trifluoromethyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 831 sing 1 n n C1 H1 831 sing 2 n n C1 H1A 831 sing 3 n n C1 H1B 831 sing 4 n n C29 F1 831 sing 5 n n C2 N1 831 sing 6 n n N1 C3 831 sing 7 n n C22 O1 831 doub 8 n n C2 H2 831 sing 9 n n C2 H2A 831 sing 10 n n C2 H2B 831 sing 11 n n C29 F2 831 sing 12 n n N3 N2 831 sing 13 n y C11 N2 831 doub 14 n y C3 C4 831 sing 15 n n C3 H3 831 sing 16 n n C3 H3A 831 sing 17 n n F3 C29 831 sing 18 n n C12 N3 831 sing 19 n y N3 C15 831 sing 20 n y C5 C4 831 doub 21 n y C4 C9 831 sing 22 n y N4 C13 831 doub 23 n y N4 C12 831 sing 24 n y C5 C6 831 sing 25 n y C5 H5 831 sing 26 n n C20 N5 831 sing 27 n n N5 C22 831 sing 28 n n N5 HN5 831 sing 29 n n C6 C7 831 doub 30 n y C6 H6 831 sing 31 n n C7 C10 831 sing 32 n y C7 C8 831 sing 33 n y C9 C8 831 doub 34 n y C8 H8 831 sing 35 n n C9 H9 831 sing 36 n n C12 C10 831 doub 37 n y C10 C11 831 sing 38 n y C11 H11 831 sing 39 n n C13 C14 831 sing 40 n y C13 H13 831 sing 41 n n C14 C15 831 doub 42 n y C14 H14 831 sing 43 n n C15 C16 831 sing 44 n y C17 C16 831 doub 45 n y C16 C21 831 sing 46 n y C17 C18 831 sing 47 n y C17 H17 831 sing 48 n n C18 C19 831 doub 49 n y C18 H18 831 sing 50 n n C19 C20 831 sing 51 n y C19 H19 831 sing 52 n n C21 C20 831 doub 53 n y C21 H21 831 sing 54 n n C22 C23 831 sing 55 n n C23 C24 831 doub 56 n y C23 C28 831 sing 57 n y C24 C25 831 sing 58 n y C24 H24 831 sing 59 n n C25 C26 831 doub 60 n y C25 H25 831 sing 61 n n C27 C26 831 sing 62 n y C26 H26 831 sing 63 n n C28 C27 831 doub 64 n y C27 C29 831 sing 65 n n C28 H28 831 sing 66 n n # _atom_sites.entry_id 3II5 _atom_sites.fract_transf_matrix[1][1] 0.009073 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006735 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 831 A 1 1 1 831 831 . D 3 PO4 A 1 726 1 PO4 PO4 . E 3 PO4 A 1 2 2 PO4 PO4 . F 2 831 B 1 1 1 831 831 . G 4 HOH A 1 3 3 HOH HOH . G 4 HOH A 2 4 4 HOH HOH . G 4 HOH A 3 5 5 HOH HOH . G 4 HOH A 4 6 6 HOH HOH . G 4 HOH A 5 7 7 HOH HOH . G 4 HOH A 6 9 9 HOH HOH . G 4 HOH A 7 11 11 HOH HOH . G 4 HOH A 8 15 15 HOH HOH . G 4 HOH A 9 16 16 HOH HOH . G 4 HOH A 10 17 17 HOH HOH . G 4 HOH A 11 18 18 HOH HOH . G 4 HOH A 12 19 19 HOH HOH . G 4 HOH A 13 727 1 HOH HOH . H 4 HOH B 1 2 2 HOH HOH . H 4 HOH B 2 8 8 HOH HOH . H 4 HOH B 3 10 10 HOH HOH . H 4 HOH B 4 12 12 HOH HOH . H 4 HOH B 5 13 13 HOH HOH . H 4 HOH B 6 14 14 HOH HOH . H 4 HOH B 7 20 20 HOH HOH . H 4 HOH B 8 21 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 831 . . . C 2 -11.955 8.542 9.029 1 59.42 ? C1 831 1 A 1 HETATM 2 F F1 831 . . . C 2 -8.559 22.015 1.254 1 40.16 ? F1 831 1 A 1 HETATM 3 N N1 831 . . . C 2 -12.822 9 10.178 1 67.21 ? N1 831 1 A 1 HETATM 4 O O1 831 . . . C 2 -8.63 20.826 5.714 1 35.79 ? O1 831 1 A 1 HETATM 5 C C2 831 . . . C 2 -14.096 9.67 9.731 1 58.11 ? C2 831 1 A 1 HETATM 6 F F2 831 . . . C 2 -6.738 22.57 0.195 1 45.65 ? F2 831 1 A 1 HETATM 7 N N2 831 . . . C 2 -8.691 16.842 9.84 1 44 ? N2 831 1 A 1 HETATM 8 C C3 831 . . . C 2 -12.05 9.743 11.266 1 61.6 ? C3 831 1 A 1 HETATM 9 F F3 831 . . . C 2 -7.868 24.067 1.258 1 41.46 ? F3 831 1 A 1 HETATM 10 N N3 831 . . . C 2 -9.898 17.398 10.121 1 43.73 ? N3 831 1 A 1 HETATM 11 C C4 831 . . . C 2 -11.588 11.168 11.027 1 68.52 ? C4 831 1 A 1 HETATM 12 N N4 831 . . . C 2 -12.14 16.789 10.754 1 43.73 ? N4 831 1 A 1 HETATM 13 C C5 831 . . . C 2 -12.267 12.267 11.586 1 58.9 ? C5 831 1 A 1 HETATM 14 N N5 831 . . . C 2 -6.964 21.376 7.252 1 35.87 ? N5 831 1 A 1 HETATM 15 C C6 831 . . . C 2 -11.836 13.584 11.362 1 49.1 ? C6 831 1 A 1 HETATM 16 C C7 831 . . . C 2 -10.705 13.837 10.569 1 50.47 ? C7 831 1 A 1 HETATM 17 C C8 831 . . . C 2 -10.025 12.74 10.019 1 51.68 ? C8 831 1 A 1 HETATM 18 C C9 831 . . . C 2 -10.455 11.427 10.242 1 55.46 ? C9 831 1 A 1 HETATM 19 C C10 831 . . . C 2 -10.206 15.192 10.345 1 45.03 ? C10 831 1 A 1 HETATM 20 C C11 831 . . . C 2 -8.893 15.54 9.98 1 43.93 ? C11 831 1 A 1 HETATM 21 C C12 831 . . . C 2 -10.859 16.42 10.438 1 42.44 ? C12 831 1 A 1 HETATM 22 C C13 831 . . . C 2 -12.4 18.063 10.738 1 38.63 ? C13 831 1 A 1 HETATM 23 C C14 831 . . . C 2 -11.456 19.16 10.416 1 36.53 ? C14 831 1 A 1 HETATM 24 C C15 831 . . . C 2 -10.204 18.77 10.108 1 40.38 ? C15 831 1 A 1 HETATM 25 C C16 831 . . . C 2 -9.171 19.789 9.823 1 34.97 ? C16 831 1 A 1 HETATM 26 C C17 831 . . . C 2 -8.787 20.551 10.934 1 35.93 ? C17 831 1 A 1 HETATM 27 C C18 831 . . . C 2 -7.827 21.551 10.846 1 33.56 ? C18 831 1 A 1 HETATM 28 C C19 831 . . . C 2 -7.221 21.813 9.625 1 31.15 ? C19 831 1 A 1 HETATM 29 C C20 831 . . . C 2 -7.573 21.074 8.493 1 39.02 ? C20 831 1 A 1 HETATM 30 C C21 831 . . . C 2 -8.555 20.053 8.583 1 35.35 ? C21 831 1 A 1 HETATM 31 C C22 831 . . . C 2 -7.521 21.25 5.998 1 32.71 ? C22 831 1 A 1 HETATM 32 C C23 831 . . . C 2 -6.674 21.718 4.885 1 35.43 ? C23 831 1 A 1 HETATM 33 C C24 831 . . . C 2 -5.289 21.872 4.964 1 33.76 ? C24 831 1 A 1 HETATM 34 C C25 831 . . . C 2 -4.594 22.328 3.843 1 37.99 ? C25 831 1 A 1 HETATM 35 C C26 831 . . . C 2 -5.273 22.629 2.659 1 41.85 ? C26 831 1 A 1 HETATM 36 C C27 831 . . . C 2 -6.661 22.477 2.584 1 41.85 ? C27 831 1 A 1 HETATM 37 C C28 831 . . . C 2 -7.353 22.022 3.704 1 38.87 ? C28 831 1 A 1 HETATM 38 C C29 831 . . . C 2 -7.438 22.782 1.34 1 42.25 ? C29 831 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #