data_3IIM # _model_server_result.job_id 4zgAY22pEq9Gd2a2slGE0A _model_server_result.datetime_utc '2024-11-13 10:55:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iim # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":174}' # _entry.id 3IIM # _exptl.entry_id 3IIM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3IIM _cell.length_a 99.276 _cell.length_b 99.276 _cell.length_c 57.969 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IIM _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 143 n n N1 C6 EPE sing 144 n n N1 C9 EPE sing 145 n n C2 C3 EPE sing 146 n n C2 H21 EPE sing 147 n n C2 H22 EPE sing 148 n n C3 N4 EPE sing 149 n n C3 H31 EPE sing 150 n n C3 H32 EPE sing 151 n n N4 C5 EPE sing 152 n n N4 C7 EPE sing 153 n n C5 C6 EPE sing 154 n n C5 H51 EPE sing 155 n n C5 H52 EPE sing 156 n n C6 H61 EPE sing 157 n n C6 H62 EPE sing 158 n n C7 C8 EPE sing 159 n n C7 H71 EPE sing 160 n n C7 H72 EPE sing 161 n n C8 O8 EPE sing 162 n n C8 H81 EPE sing 163 n n C8 H82 EPE sing 164 n n O8 HO8 EPE sing 165 n n C9 C10 EPE sing 166 n n C9 H91 EPE sing 167 n n C9 H92 EPE sing 168 n n C10 S EPE sing 169 n n C10 H101 EPE sing 170 n n C10 H102 EPE sing 171 n n S O1S EPE doub 172 n n S O2S EPE doub 173 n n S O3S EPE sing 174 n n O3S HOS3 EPE sing 175 n n # _atom_sites.entry_id 3IIM _atom_sites.fract_transf_matrix[1][1] 0.010073 _atom_sites.fract_transf_matrix[1][2] 0.005816 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017251 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DTV A 1 173 173 DTV DTV . C 3 EPE A 1 174 174 EPE EPE . D 4 DAT A 1 175 175 DAT DAT . E 5 SO4 A 1 176 176 SO4 SO4 . F 5 SO4 A 1 177 177 SO4 SO4 . G 5 SO4 A 1 178 178 SO4 SO4 . H 5 SO4 A 1 179 179 SO4 SO4 . I 6 HOH A 1 180 180 HOH HOH . I 6 HOH A 2 181 181 HOH HOH . I 6 HOH A 3 182 182 HOH HOH . I 6 HOH A 4 183 183 HOH HOH . I 6 HOH A 5 184 184 HOH HOH . I 6 HOH A 6 185 185 HOH HOH . I 6 HOH A 7 186 186 HOH HOH . I 6 HOH A 8 187 187 HOH HOH . I 6 HOH A 9 188 188 HOH HOH . I 6 HOH A 10 189 189 HOH HOH . I 6 HOH A 11 190 190 HOH HOH . I 6 HOH A 12 191 191 HOH HOH . I 6 HOH A 13 192 192 HOH HOH . I 6 HOH A 14 193 193 HOH HOH . I 6 HOH A 15 194 194 HOH HOH . I 6 HOH A 16 195 195 HOH HOH . I 6 HOH A 17 196 196 HOH HOH . I 6 HOH A 18 197 197 HOH HOH . I 6 HOH A 19 198 198 HOH HOH . I 6 HOH A 20 199 199 HOH HOH . I 6 HOH A 21 200 200 HOH HOH . I 6 HOH A 22 201 201 HOH HOH . I 6 HOH A 23 202 202 HOH HOH . I 6 HOH A 24 203 203 HOH HOH . I 6 HOH A 25 204 204 HOH HOH . I 6 HOH A 26 205 205 HOH HOH . I 6 HOH A 27 206 206 HOH HOH . I 6 HOH A 28 207 207 HOH HOH . I 6 HOH A 29 208 208 HOH HOH . I 6 HOH A 30 209 209 HOH HOH . I 6 HOH A 31 210 210 HOH HOH . I 6 HOH A 32 211 211 HOH HOH . I 6 HOH A 33 212 212 HOH HOH . I 6 HOH A 34 213 213 HOH HOH . I 6 HOH A 35 214 214 HOH HOH . I 6 HOH A 36 215 215 HOH HOH . I 6 HOH A 37 216 216 HOH HOH . I 6 HOH A 38 217 217 HOH HOH . I 6 HOH A 39 218 218 HOH HOH . I 6 HOH A 40 219 219 HOH HOH . I 6 HOH A 41 220 220 HOH HOH . I 6 HOH A 42 221 221 HOH HOH . I 6 HOH A 43 222 222 HOH HOH . I 6 HOH A 44 223 223 HOH HOH . I 6 HOH A 45 224 224 HOH HOH . I 6 HOH A 46 225 225 HOH HOH . I 6 HOH A 47 226 226 HOH HOH . I 6 HOH A 48 227 227 HOH HOH . I 6 HOH A 49 228 228 HOH HOH . I 6 HOH A 50 229 229 HOH HOH . I 6 HOH A 51 230 230 HOH HOH . I 6 HOH A 52 231 231 HOH HOH . I 6 HOH A 53 232 232 HOH HOH . I 6 HOH A 54 233 233 HOH HOH . I 6 HOH A 55 234 234 HOH HOH . I 6 HOH A 56 235 235 HOH HOH . I 6 HOH A 57 236 236 HOH HOH . I 6 HOH A 58 237 237 HOH HOH . I 6 HOH A 59 238 238 HOH HOH . I 6 HOH A 60 239 239 HOH HOH . I 6 HOH A 61 240 240 HOH HOH . I 6 HOH A 62 241 241 HOH HOH . I 6 HOH A 63 242 242 HOH HOH . I 6 HOH A 64 243 243 HOH HOH . I 6 HOH A 65 244 244 HOH HOH . I 6 HOH A 66 245 245 HOH HOH . I 6 HOH A 67 246 246 HOH HOH . I 6 HOH A 68 247 247 HOH HOH . I 6 HOH A 69 248 248 HOH HOH . I 6 HOH A 70 249 249 HOH HOH . I 6 HOH A 71 250 250 HOH HOH . I 6 HOH A 72 251 251 HOH HOH . I 6 HOH A 73 252 252 HOH HOH . I 6 HOH A 74 253 253 HOH HOH . I 6 HOH A 75 254 254 HOH HOH . I 6 HOH A 76 255 255 HOH HOH . I 6 HOH A 77 256 256 HOH HOH . I 6 HOH A 78 257 257 HOH HOH . I 6 HOH A 79 258 258 HOH HOH . I 6 HOH A 80 259 259 HOH HOH . I 6 HOH A 81 260 260 HOH HOH . I 6 HOH A 82 261 261 HOH HOH . I 6 HOH A 83 262 262 HOH HOH . I 6 HOH A 84 263 263 HOH HOH . I 6 HOH A 85 264 264 HOH HOH . I 6 HOH A 86 265 265 HOH HOH . I 6 HOH A 87 266 266 HOH HOH . I 6 HOH A 88 267 267 HOH HOH . I 6 HOH A 89 268 268 HOH HOH . I 6 HOH A 90 269 269 HOH HOH . I 6 HOH A 91 270 270 HOH HOH . I 6 HOH A 92 271 271 HOH HOH . I 6 HOH A 93 272 272 HOH HOH . I 6 HOH A 94 273 273 HOH HOH . I 6 HOH A 95 274 274 HOH HOH . I 6 HOH A 96 275 275 HOH HOH . I 6 HOH A 97 276 276 HOH HOH . I 6 HOH A 98 277 277 HOH HOH . I 6 HOH A 99 278 278 HOH HOH . I 6 HOH A 100 279 279 HOH HOH . I 6 HOH A 101 280 280 HOH HOH . I 6 HOH A 102 281 281 HOH HOH . I 6 HOH A 103 282 282 HOH HOH . I 6 HOH A 104 283 283 HOH HOH . I 6 HOH A 105 284 284 HOH HOH . I 6 HOH A 106 285 285 HOH HOH . I 6 HOH A 107 286 286 HOH HOH . I 6 HOH A 108 287 287 HOH HOH . I 6 HOH A 109 288 288 HOH HOH . I 6 HOH A 110 289 289 HOH HOH . I 6 HOH A 111 290 290 HOH HOH . I 6 HOH A 112 291 291 HOH HOH . I 6 HOH A 113 292 292 HOH HOH . I 6 HOH A 114 293 293 HOH HOH . I 6 HOH A 115 294 294 HOH HOH . I 6 HOH A 116 295 295 HOH HOH . I 6 HOH A 117 296 296 HOH HOH . I 6 HOH A 118 297 297 HOH HOH . I 6 HOH A 119 298 298 HOH HOH . I 6 HOH A 120 299 299 HOH HOH . I 6 HOH A 121 300 300 HOH HOH . I 6 HOH A 122 301 301 HOH HOH . I 6 HOH A 123 302 302 HOH HOH . I 6 HOH A 124 303 303 HOH HOH . I 6 HOH A 125 304 304 HOH HOH . I 6 HOH A 126 305 305 HOH HOH . I 6 HOH A 127 306 306 HOH HOH . I 6 HOH A 128 307 307 HOH HOH . I 6 HOH A 129 308 308 HOH HOH . I 6 HOH A 130 309 309 HOH HOH . I 6 HOH A 131 310 310 HOH HOH . I 6 HOH A 132 311 311 HOH HOH . I 6 HOH A 133 312 312 HOH HOH . I 6 HOH A 134 313 313 HOH HOH . I 6 HOH A 135 314 314 HOH HOH . I 6 HOH A 136 315 315 HOH HOH . I 6 HOH A 137 316 316 HOH HOH . I 6 HOH A 138 317 317 HOH HOH . I 6 HOH A 139 318 318 HOH HOH . I 6 HOH A 140 319 319 HOH HOH . I 6 HOH A 141 320 320 HOH HOH . I 6 HOH A 142 321 321 HOH HOH . I 6 HOH A 143 322 322 HOH HOH . I 6 HOH A 144 323 323 HOH HOH . I 6 HOH A 145 324 324 HOH HOH . I 6 HOH A 146 325 325 HOH HOH . I 6 HOH A 147 326 326 HOH HOH . I 6 HOH A 148 327 327 HOH HOH . I 6 HOH A 149 328 328 HOH HOH . I 6 HOH A 150 329 329 HOH HOH . I 6 HOH A 151 330 330 HOH HOH . I 6 HOH A 152 331 331 HOH HOH . I 6 HOH A 153 332 332 HOH HOH . I 6 HOH A 154 333 333 HOH HOH . I 6 HOH A 155 334 334 HOH HOH . I 6 HOH A 156 335 335 HOH HOH . I 6 HOH A 157 336 336 HOH HOH . I 6 HOH A 158 337 337 HOH HOH . I 6 HOH A 159 338 338 HOH HOH . I 6 HOH A 160 339 339 HOH HOH . I 6 HOH A 161 340 340 HOH HOH . I 6 HOH A 162 341 341 HOH HOH . I 6 HOH A 163 342 342 HOH HOH . I 6 HOH A 164 343 343 HOH HOH . I 6 HOH A 165 344 344 HOH HOH . I 6 HOH A 166 345 345 HOH HOH . I 6 HOH A 167 346 346 HOH HOH . I 6 HOH A 168 347 347 HOH HOH . I 6 HOH A 169 348 348 HOH HOH . I 6 HOH A 170 349 349 HOH HOH . I 6 HOH A 171 350 350 HOH HOH . I 6 HOH A 172 351 351 HOH HOH . I 6 HOH A 173 352 352 HOH HOH . I 6 HOH A 174 353 353 HOH HOH . I 6 HOH A 175 354 354 HOH HOH . I 6 HOH A 176 355 355 HOH HOH . I 6 HOH A 177 356 356 HOH HOH . I 6 HOH A 178 357 357 HOH HOH . I 6 HOH A 179 358 358 HOH HOH . I 6 HOH A 180 359 359 HOH HOH . I 6 HOH A 181 360 360 HOH HOH . I 6 HOH A 182 361 361 HOH HOH . I 6 HOH A 183 362 362 HOH HOH . I 6 HOH A 184 363 363 HOH HOH . I 6 HOH A 185 364 364 HOH HOH . I 6 HOH A 186 365 365 HOH HOH . I 6 HOH A 187 366 366 HOH HOH . I 6 HOH A 188 367 367 HOH HOH . I 6 HOH A 189 368 368 HOH HOH . I 6 HOH A 190 369 369 HOH HOH . I 6 HOH A 191 370 370 HOH HOH . I 6 HOH A 192 371 371 HOH HOH . I 6 HOH A 193 372 372 HOH HOH . I 6 HOH A 194 373 373 HOH HOH . I 6 HOH A 195 374 374 HOH HOH . I 6 HOH A 196 375 375 HOH HOH . I 6 HOH A 197 376 376 HOH HOH . I 6 HOH A 198 377 377 HOH HOH . I 6 HOH A 199 378 378 HOH HOH . I 6 HOH A 200 379 379 HOH HOH . I 6 HOH A 201 380 380 HOH HOH . I 6 HOH A 202 381 381 HOH HOH . I 6 HOH A 203 382 382 HOH HOH . I 6 HOH A 204 383 383 HOH HOH . I 6 HOH A 205 384 384 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . C 3 -24.773 -13.977 4.32 0.5 34.81 ? N1 EPE 174 A 1 HETATM 2 C C2 EPE . . . C 3 -23.398 -13.465 4.211 0.5 35.7 ? C2 EPE 174 A 1 HETATM 3 C C3 EPE . . . C 3 -22.505 -14.554 3.617 0.5 34.87 ? C3 EPE 174 A 1 HETATM 4 N N4 EPE . . . C 3 -22.688 -15.839 4.269 0.5 34.11 ? N4 EPE 174 A 1 HETATM 5 C C5 EPE . . . C 3 -23.997 -16.255 4.707 0.5 34.41 ? C5 EPE 174 A 1 HETATM 6 C C6 EPE . . . C 3 -24.81 -15.1 5.264 0.5 35.47 ? C6 EPE 174 A 1 HETATM 7 C C7 EPE . . . C 3 -21.61 -16.809 4.273 0.5 34.17 ? C7 EPE 174 A 1 HETATM 8 C C8 EPE . . . C 3 -20.433 -16.253 3.503 0.5 33.72 ? C8 EPE 174 A 1 HETATM 9 O O8 EPE . . . C 3 -20.922 -15.414 2.479 0.5 34.64 ? O8 EPE 174 A 1 HETATM 10 C C9 EPE . . . C 3 -25.688 -12.945 4.822 0.5 36.31 ? C9 EPE 174 A 1 HETATM 11 C C10 EPE . . . C 3 -27.083 -13.566 4.85 0.5 37.36 ? C10 EPE 174 A 1 HETATM 12 S S EPE . . . C 3 -28.341 -12.45 5.515 0.5 38.62 ? S EPE 174 A 1 HETATM 13 O O1S EPE . . . C 3 -28.59 -11.385 4.562 0.5 37.87 ? O1S EPE 174 A 1 HETATM 14 O O2S EPE . . . C 3 -27.847 -11.907 6.783 0.5 39.26 ? O2S EPE 174 A 1 HETATM 15 O O3S EPE . . . C 3 -29.576 -13.179 5.765 0.5 38.62 ? O3S EPE 174 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #