data_3IJF # _model_server_result.job_id e1B4GwkbKc9WLEsvRP3fbw _model_server_result.datetime_utc '2024-11-25 13:53:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ijf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":147}' # _entry.id 3IJF # _exptl.entry_id 3IJF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IJF _cell.length_a 63.705 _cell.length_b 75.338 _cell.length_c 55.116 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IJF _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2,3,4 A,B,C 2 1,3 A,B,C 3 1,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 55.116 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 55.116 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 56 X CYS 56 1_555 B ZN ZN . X ZN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc2 A SG CYS 89 X CYS 89 1_555 B ZN ZN . X ZN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc3 A SG CYS 92 X CYS 92 1_555 B ZN ZN . X ZN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc4 B ZN ZN . X ZN 147 1_555 C O HOH . X HOH 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IJF _atom_sites.fract_transf_matrix[1][1] 0.015697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN X 1 147 147 ZN ZN . C 3 HOH X 1 150 150 HOH HOH . C 3 HOH X 2 151 151 HOH HOH . C 3 HOH X 3 152 152 HOH HOH . C 3 HOH X 4 153 153 HOH HOH . C 3 HOH X 5 154 154 HOH HOH . C 3 HOH X 6 155 155 HOH HOH . C 3 HOH X 7 156 156 HOH HOH . C 3 HOH X 8 157 157 HOH HOH . C 3 HOH X 9 158 158 HOH HOH . C 3 HOH X 10 159 159 HOH HOH . C 3 HOH X 11 160 160 HOH HOH . C 3 HOH X 12 161 161 HOH HOH . C 3 HOH X 13 162 162 HOH HOH . C 3 HOH X 14 163 163 HOH HOH . C 3 HOH X 15 164 164 HOH HOH . C 3 HOH X 16 165 165 HOH HOH . C 3 HOH X 17 166 166 HOH HOH . C 3 HOH X 18 167 167 HOH HOH . C 3 HOH X 19 168 168 HOH HOH . C 3 HOH X 20 169 169 HOH HOH . C 3 HOH X 21 170 170 HOH HOH . C 3 HOH X 22 171 171 HOH HOH . C 3 HOH X 23 172 172 HOH HOH . C 3 HOH X 24 173 173 HOH HOH . C 3 HOH X 25 174 174 HOH HOH . C 3 HOH X 26 175 175 HOH HOH . C 3 HOH X 27 176 176 HOH HOH . C 3 HOH X 28 177 177 HOH HOH . C 3 HOH X 29 178 178 HOH HOH . C 3 HOH X 30 179 179 HOH HOH . C 3 HOH X 31 180 180 HOH HOH . C 3 HOH X 32 181 181 HOH HOH . C 3 HOH X 33 182 182 HOH HOH . C 3 HOH X 34 183 183 HOH HOH . C 3 HOH X 35 184 184 HOH HOH . C 3 HOH X 36 185 185 HOH HOH . C 3 HOH X 37 186 186 HOH HOH . C 3 HOH X 38 187 187 HOH HOH . C 3 HOH X 39 188 188 HOH HOH . C 3 HOH X 40 189 189 HOH HOH . C 3 HOH X 41 190 190 HOH HOH . C 3 HOH X 42 191 191 HOH HOH . C 3 HOH X 43 192 192 HOH HOH . C 3 HOH X 44 193 193 HOH HOH . C 3 HOH X 45 194 194 HOH HOH . C 3 HOH X 46 195 195 HOH HOH . C 3 HOH X 47 196 196 HOH HOH . C 3 HOH X 48 197 197 HOH HOH . C 3 HOH X 49 198 198 HOH HOH . C 3 HOH X 50 199 199 HOH HOH . C 3 HOH X 51 200 200 HOH HOH . C 3 HOH X 52 201 201 HOH HOH . C 3 HOH X 53 202 202 HOH HOH . C 3 HOH X 54 203 203 HOH HOH . C 3 HOH X 55 204 204 HOH HOH . C 3 HOH X 56 205 205 HOH HOH . C 3 HOH X 57 206 206 HOH HOH . C 3 HOH X 58 207 207 HOH HOH . C 3 HOH X 59 208 208 HOH HOH . C 3 HOH X 60 209 209 HOH HOH . C 3 HOH X 61 210 210 HOH HOH . C 3 HOH X 62 211 211 HOH HOH . C 3 HOH X 63 212 212 HOH HOH . C 3 HOH X 64 213 213 HOH HOH . C 3 HOH X 65 214 214 HOH HOH . C 3 HOH X 66 215 215 HOH HOH . C 3 HOH X 67 216 216 HOH HOH . C 3 HOH X 68 217 217 HOH HOH . C 3 HOH X 69 218 218 HOH HOH . C 3 HOH X 70 219 219 HOH HOH . C 3 HOH X 71 220 220 HOH HOH . C 3 HOH X 72 221 221 HOH HOH . C 3 HOH X 73 222 222 HOH HOH . C 3 HOH X 74 223 223 HOH HOH . C 3 HOH X 75 224 224 HOH HOH . C 3 HOH X 76 225 225 HOH HOH . C 3 HOH X 77 226 226 HOH HOH . C 3 HOH X 78 227 227 HOH HOH . C 3 HOH X 79 228 228 HOH HOH . C 3 HOH X 80 229 229 HOH HOH . C 3 HOH X 81 230 230 HOH HOH . C 3 HOH X 82 231 231 HOH HOH . C 3 HOH X 83 232 232 HOH HOH . C 3 HOH X 84 233 233 HOH HOH . C 3 HOH X 85 234 234 HOH HOH . C 3 HOH X 86 235 235 HOH HOH . C 3 HOH X 87 236 236 HOH HOH . C 3 HOH X 88 237 237 HOH HOH . C 3 HOH X 89 238 238 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.356 _atom_site.Cartn_y 5.117 _atom_site.Cartn_z 19.718 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 147 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #