data_3IJX # _model_server_result.job_id MRD22aDWt3wkTS15-TPqCw _model_server_result.datetime_utc '2024-11-08 06:56:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ijx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":262}' # _entry.id 3IJX # _exptl.entry_id 3IJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IJX _cell.length_a 47.404 _cell.length_b 114.35 _cell.length_c 162.868 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,O,P 1 1 C,J,K,L,M,N,Q 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_544 x,-y-1,-z-1 1 0 0 0 -1 0 0 0 -1 0 -114.35 -162.868 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N ? 4 L N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 203 B CYS 206 1_555 A SG CYS 258 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 203 D CYS 206 1_555 B SG CYS 258 D CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 C SG CYS 203 H CYS 206 1_555 C SG CYS 258 H CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 A NE2 HIS 20 B HIS 23 1_555 F ZN ZN . B ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc2 A NE2 HIS 43 B HIS 46 1_555 M ZN ZN . H ZN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc3 I ZN ZN . D ZN 1 1_555 B OE1 GLU 39 D GLU 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc4 I ZN ZN . D ZN 1 1_555 B NE2 HIS 43 D HIS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc5 M ZN ZN . H ZN 3 1_555 C OE1 GLU 163 H GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IJX _atom_sites.fract_transf_matrix[1][1] 0.021095 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00614 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GLU B 1 400 400 GLU GLU . E 3 HCZ B 1 800 800 HCZ HCZ . F 4 ZN B 1 262 4 ZN ZN . G 2 GLU D 1 400 400 GLU GLU . H 3 HCZ D 1 800 800 HCZ HCZ . I 4 ZN D 1 1 1 ZN ZN . J 2 GLU H 1 400 400 GLU GLU . K 3 HCZ H 1 800 800 HCZ HCZ . L 4 ZN H 1 2 2 ZN ZN . M 4 ZN H 1 3 3 ZN ZN . N 4 ZN H 1 262 5 ZN ZN . O 5 HOH B 1 263 8 HOH HOH . O 5 HOH B 2 264 9 HOH HOH . O 5 HOH B 3 265 10 HOH HOH . O 5 HOH B 4 266 11 HOH HOH . O 5 HOH B 5 267 12 HOH HOH . O 5 HOH B 6 268 20 HOH HOH . O 5 HOH B 7 269 22 HOH HOH . O 5 HOH B 8 270 28 HOH HOH . O 5 HOH B 9 271 29 HOH HOH . O 5 HOH B 10 272 38 HOH HOH . O 5 HOH B 11 273 39 HOH HOH . O 5 HOH B 12 274 47 HOH HOH . O 5 HOH B 13 275 50 HOH HOH . O 5 HOH B 14 276 54 HOH HOH . O 5 HOH B 15 277 58 HOH HOH . O 5 HOH B 16 278 59 HOH HOH . O 5 HOH B 17 279 64 HOH HOH . O 5 HOH B 18 280 65 HOH HOH . O 5 HOH B 19 281 72 HOH HOH . O 5 HOH B 20 282 73 HOH HOH . O 5 HOH B 21 283 74 HOH HOH . O 5 HOH B 22 284 79 HOH HOH . O 5 HOH B 23 285 82 HOH HOH . O 5 HOH B 24 286 86 HOH HOH . O 5 HOH B 25 287 91 HOH HOH . O 5 HOH B 26 288 94 HOH HOH . O 5 HOH B 27 289 95 HOH HOH . O 5 HOH B 28 290 100 HOH HOH . O 5 HOH B 29 291 103 HOH HOH . O 5 HOH B 30 292 104 HOH HOH . O 5 HOH B 31 293 111 HOH HOH . O 5 HOH B 32 294 112 HOH HOH . O 5 HOH B 33 295 113 HOH HOH . O 5 HOH B 34 296 120 HOH HOH . O 5 HOH B 35 297 122 HOH HOH . O 5 HOH B 36 298 129 HOH HOH . O 5 HOH B 37 299 133 HOH HOH . O 5 HOH B 38 300 135 HOH HOH . O 5 HOH B 39 301 147 HOH HOH . O 5 HOH B 40 302 148 HOH HOH . O 5 HOH B 41 303 149 HOH HOH . O 5 HOH B 42 304 150 HOH HOH . O 5 HOH B 43 305 156 HOH HOH . O 5 HOH B 44 306 157 HOH HOH . O 5 HOH B 45 307 158 HOH HOH . O 5 HOH B 46 308 162 HOH HOH . O 5 HOH B 47 309 165 HOH HOH . O 5 HOH B 48 310 170 HOH HOH . O 5 HOH B 49 311 173 HOH HOH . P 5 HOH D 1 262 4 HOH HOH . P 5 HOH D 2 263 5 HOH HOH . P 5 HOH D 3 264 19 HOH HOH . P 5 HOH D 4 265 21 HOH HOH . P 5 HOH D 5 266 23 HOH HOH . P 5 HOH D 6 267 24 HOH HOH . P 5 HOH D 7 268 30 HOH HOH . P 5 HOH D 8 269 31 HOH HOH . P 5 HOH D 9 270 32 HOH HOH . P 5 HOH D 10 271 33 HOH HOH . P 5 HOH D 11 272 34 HOH HOH . P 5 HOH D 12 273 35 HOH HOH . P 5 HOH D 13 274 36 HOH HOH . P 5 HOH D 14 275 37 HOH HOH . P 5 HOH D 15 276 40 HOH HOH . P 5 HOH D 16 277 41 HOH HOH . P 5 HOH D 17 278 44 HOH HOH . P 5 HOH D 18 279 46 HOH HOH . P 5 HOH D 19 280 51 HOH HOH . P 5 HOH D 20 281 53 HOH HOH . P 5 HOH D 21 282 60 HOH HOH . P 5 HOH D 22 283 62 HOH HOH . P 5 HOH D 23 284 66 HOH HOH . P 5 HOH D 24 285 68 HOH HOH . P 5 HOH D 25 286 71 HOH HOH . P 5 HOH D 26 287 75 HOH HOH . P 5 HOH D 27 288 77 HOH HOH . P 5 HOH D 28 289 78 HOH HOH . P 5 HOH D 29 290 80 HOH HOH . P 5 HOH D 30 291 83 HOH HOH . P 5 HOH D 31 292 88 HOH HOH . P 5 HOH D 32 293 92 HOH HOH . P 5 HOH D 33 294 97 HOH HOH . P 5 HOH D 34 295 98 HOH HOH . P 5 HOH D 35 296 101 HOH HOH . P 5 HOH D 36 297 107 HOH HOH . P 5 HOH D 37 298 108 HOH HOH . P 5 HOH D 38 299 110 HOH HOH . P 5 HOH D 39 300 115 HOH HOH . P 5 HOH D 40 301 116 HOH HOH . P 5 HOH D 41 302 119 HOH HOH . P 5 HOH D 42 303 121 HOH HOH . P 5 HOH D 43 304 127 HOH HOH . P 5 HOH D 44 305 130 HOH HOH . P 5 HOH D 45 306 131 HOH HOH . P 5 HOH D 46 307 136 HOH HOH . P 5 HOH D 47 308 139 HOH HOH . P 5 HOH D 48 309 142 HOH HOH . P 5 HOH D 49 310 144 HOH HOH . P 5 HOH D 50 311 146 HOH HOH . P 5 HOH D 51 312 152 HOH HOH . P 5 HOH D 52 313 155 HOH HOH . P 5 HOH D 53 314 160 HOH HOH . P 5 HOH D 54 315 163 HOH HOH . P 5 HOH D 55 316 164 HOH HOH . P 5 HOH D 56 317 166 HOH HOH . P 5 HOH D 57 318 174 HOH HOH . Q 5 HOH H 1 263 2 HOH HOH . Q 5 HOH H 2 264 3 HOH HOH . Q 5 HOH H 3 265 6 HOH HOH . Q 5 HOH H 4 266 7 HOH HOH . Q 5 HOH H 5 267 13 HOH HOH . Q 5 HOH H 6 268 14 HOH HOH . Q 5 HOH H 7 269 15 HOH HOH . Q 5 HOH H 8 270 16 HOH HOH . Q 5 HOH H 9 271 17 HOH HOH . Q 5 HOH H 10 272 18 HOH HOH . Q 5 HOH H 11 273 25 HOH HOH . Q 5 HOH H 12 274 26 HOH HOH . Q 5 HOH H 13 275 27 HOH HOH . Q 5 HOH H 14 276 43 HOH HOH . Q 5 HOH H 15 277 45 HOH HOH . Q 5 HOH H 16 278 48 HOH HOH . Q 5 HOH H 17 279 49 HOH HOH . Q 5 HOH H 18 280 52 HOH HOH . Q 5 HOH H 19 281 55 HOH HOH . Q 5 HOH H 20 282 56 HOH HOH . Q 5 HOH H 21 283 57 HOH HOH . Q 5 HOH H 22 284 61 HOH HOH . Q 5 HOH H 23 285 63 HOH HOH . Q 5 HOH H 24 286 67 HOH HOH . Q 5 HOH H 25 287 69 HOH HOH . Q 5 HOH H 26 288 70 HOH HOH . Q 5 HOH H 27 289 76 HOH HOH . Q 5 HOH H 28 290 81 HOH HOH . Q 5 HOH H 29 291 84 HOH HOH . Q 5 HOH H 30 292 85 HOH HOH . Q 5 HOH H 31 293 87 HOH HOH . Q 5 HOH H 32 294 89 HOH HOH . Q 5 HOH H 33 295 93 HOH HOH . Q 5 HOH H 34 296 99 HOH HOH . Q 5 HOH H 35 297 102 HOH HOH . Q 5 HOH H 36 298 106 HOH HOH . Q 5 HOH H 37 299 109 HOH HOH . Q 5 HOH H 38 300 114 HOH HOH . Q 5 HOH H 39 301 117 HOH HOH . Q 5 HOH H 40 302 118 HOH HOH . Q 5 HOH H 41 303 123 HOH HOH . Q 5 HOH H 42 304 124 HOH HOH . Q 5 HOH H 43 305 126 HOH HOH . Q 5 HOH H 44 306 128 HOH HOH . Q 5 HOH H 45 307 134 HOH HOH . Q 5 HOH H 46 308 137 HOH HOH . Q 5 HOH H 47 309 138 HOH HOH . Q 5 HOH H 48 310 140 HOH HOH . Q 5 HOH H 49 311 141 HOH HOH . Q 5 HOH H 50 312 143 HOH HOH . Q 5 HOH H 51 313 145 HOH HOH . Q 5 HOH H 52 314 151 HOH HOH . Q 5 HOH H 53 315 153 HOH HOH . Q 5 HOH H 54 316 154 HOH HOH . Q 5 HOH H 55 317 159 HOH HOH . Q 5 HOH H 56 318 161 HOH HOH . Q 5 HOH H 57 319 167 HOH HOH . Q 5 HOH H 58 320 168 HOH HOH . Q 5 HOH H 59 321 169 HOH HOH . Q 5 HOH H 60 322 171 HOH HOH . Q 5 HOH H 61 323 172 HOH HOH . Q 5 HOH H 62 324 175 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.962 _atom_site.Cartn_y -25.584 _atom_site.Cartn_z -46.312 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 262 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #