data_3ILK # _model_server_result.job_id s7ckFK9rd-VLgKp6n26Yww _model_server_result.datetime_utc '2024-11-05 01:02:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ilk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":247}' # _entry.id 3ILK # _exptl.entry_id 3ILK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ILK _cell.length_a 48.167 _cell.length_b 94.392 _cell.length_c 124.111 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ILK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N LEU 5 A LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C ALA 27 A ALA 24 1_555 A N MSE 28 A MSE 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale4 A C MSE 28 A MSE 25 1_555 A N LYS 29 A LYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C THR 30 A THR 27 1_555 A N MSE 31 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale6 A C MSE 31 A MSE 28 1_555 A N GLY 32 A GLY 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 A C ALA 146 A ALA 143 1_555 A N MSE 147 A MSE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C MSE 147 A MSE 144 1_555 A N ALA 148 A ALA 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 A C ARG 157 A ARG 154 1_555 A N MSE 158 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale10 A C MSE 158 A MSE 155 1_555 A N ALA 159 A ALA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale11 A C VAL 205 A VAL 202 1_555 A N MSE 206 A MSE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C MSE 206 A MSE 203 1_555 A N ARG 207 A ARG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale13 A C GLY 228 A GLY 225 1_555 A N MSE 229 A MSE 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 A C MSE 229 A MSE 226 1_555 A N LEU 230 A LEU 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale15 B C MSE 4 B MSE 1 1_555 B N LEU 5 B LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 B C ALA 27 B ALA 24 1_555 B N MSE 28 B MSE 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale17 B C MSE 28 B MSE 25 1_555 B N LYS 29 B LYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale18 B C THR 30 B THR 27 1_555 B N MSE 31 B MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale19 B C MSE 31 B MSE 28 1_555 B N GLY 32 B GLY 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale20 B C ALA 146 B ALA 143 1_555 B N MSE 147 B MSE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale21 B C MSE 147 B MSE 144 1_555 B N ALA 148 B ALA 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 B C ARG 157 B ARG 154 1_555 B N MSE 158 B MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale23 B C MSE 158 B MSE 155 1_555 B N ALA 159 B ALA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale24 B C VAL 205 B VAL 202 1_555 B N MSE 206 B MSE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale25 B C MSE 206 B MSE 203 1_555 B N ARG 207 B ARG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale26 B C GLY 228 B GLY 225 1_555 B N MSE 229 B MSE 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 B C MSE 229 B MSE 226 1_555 B N LEU 230 B LEU 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 305 n n S O2 SO4 doub 306 n n S O3 SO4 sing 307 n n S O4 SO4 sing 308 n n # _atom_sites.entry_id 3ILK _atom_sites.fract_transf_matrix[1][1] 0.020761 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 242 3 EDO EDO . D 2 EDO A 1 243 4 EDO EDO . E 2 EDO B 1 242 1 EDO EDO . F 2 EDO B 1 243 2 EDO EDO . G 2 EDO B 1 244 5 EDO EDO . H 3 ACT B 1 245 1 ACT ACT . I 4 SO4 B 1 246 1 SO4 SO4 . J 4 SO4 B 1 247 2 SO4 SO4 . K 5 HOH A 1 244 1 HOH HOH . K 5 HOH A 2 245 2 HOH HOH . K 5 HOH A 3 246 4 HOH HOH . K 5 HOH A 4 247 5 HOH HOH . K 5 HOH A 5 248 6 HOH HOH . K 5 HOH A 6 249 7 HOH HOH . K 5 HOH A 7 250 8 HOH HOH . K 5 HOH A 8 251 9 HOH HOH . K 5 HOH A 9 252 10 HOH HOH . K 5 HOH A 10 253 11 HOH HOH . K 5 HOH A 11 254 12 HOH HOH . K 5 HOH A 12 255 13 HOH HOH . K 5 HOH A 13 256 14 HOH HOH . K 5 HOH A 14 257 15 HOH HOH . K 5 HOH A 15 258 16 HOH HOH . K 5 HOH A 16 259 17 HOH HOH . K 5 HOH A 17 260 18 HOH HOH . K 5 HOH A 18 261 19 HOH HOH . K 5 HOH A 19 262 21 HOH HOH . K 5 HOH A 20 263 23 HOH HOH . K 5 HOH A 21 264 24 HOH HOH . K 5 HOH A 22 265 25 HOH HOH . K 5 HOH A 23 266 27 HOH HOH . K 5 HOH A 24 267 28 HOH HOH . K 5 HOH A 25 268 29 HOH HOH . K 5 HOH A 26 269 30 HOH HOH . K 5 HOH A 27 270 32 HOH HOH . K 5 HOH A 28 271 33 HOH HOH . K 5 HOH A 29 272 35 HOH HOH . K 5 HOH A 30 273 38 HOH HOH . K 5 HOH A 31 274 42 HOH HOH . K 5 HOH A 32 275 45 HOH HOH . K 5 HOH A 33 276 46 HOH HOH . K 5 HOH A 34 277 48 HOH HOH . K 5 HOH A 35 278 49 HOH HOH . K 5 HOH A 36 279 51 HOH HOH . K 5 HOH A 37 280 52 HOH HOH . K 5 HOH A 38 281 54 HOH HOH . K 5 HOH A 39 282 55 HOH HOH . K 5 HOH A 40 283 56 HOH HOH . K 5 HOH A 41 284 58 HOH HOH . K 5 HOH A 42 285 59 HOH HOH . K 5 HOH A 43 286 60 HOH HOH . K 5 HOH A 44 287 61 HOH HOH . K 5 HOH A 45 288 62 HOH HOH . K 5 HOH A 46 289 64 HOH HOH . K 5 HOH A 47 290 65 HOH HOH . K 5 HOH A 48 291 68 HOH HOH . K 5 HOH A 49 292 69 HOH HOH . K 5 HOH A 50 293 70 HOH HOH . K 5 HOH A 51 294 71 HOH HOH . K 5 HOH A 52 295 72 HOH HOH . K 5 HOH A 53 296 74 HOH HOH . K 5 HOH A 54 297 79 HOH HOH . K 5 HOH A 55 298 80 HOH HOH . K 5 HOH A 56 299 81 HOH HOH . K 5 HOH A 57 300 82 HOH HOH . K 5 HOH A 58 301 84 HOH HOH . K 5 HOH A 59 302 85 HOH HOH . K 5 HOH A 60 303 86 HOH HOH . K 5 HOH A 61 304 87 HOH HOH . K 5 HOH A 62 305 89 HOH HOH . K 5 HOH A 63 306 90 HOH HOH . K 5 HOH A 64 307 97 HOH HOH . K 5 HOH A 65 308 99 HOH HOH . K 5 HOH A 66 309 100 HOH HOH . K 5 HOH A 67 310 102 HOH HOH . K 5 HOH A 68 311 105 HOH HOH . K 5 HOH A 69 312 107 HOH HOH . K 5 HOH A 70 313 108 HOH HOH . K 5 HOH A 71 314 111 HOH HOH . K 5 HOH A 72 315 112 HOH HOH . K 5 HOH A 73 316 113 HOH HOH . K 5 HOH A 74 317 114 HOH HOH . K 5 HOH A 75 318 118 HOH HOH . K 5 HOH A 76 319 119 HOH HOH . K 5 HOH A 77 320 121 HOH HOH . L 5 HOH B 1 248 3 HOH HOH . L 5 HOH B 2 249 20 HOH HOH . L 5 HOH B 3 250 22 HOH HOH . L 5 HOH B 4 251 26 HOH HOH . L 5 HOH B 5 252 31 HOH HOH . L 5 HOH B 6 253 34 HOH HOH . L 5 HOH B 7 254 36 HOH HOH . L 5 HOH B 8 255 37 HOH HOH . L 5 HOH B 9 256 39 HOH HOH . L 5 HOH B 10 257 40 HOH HOH . L 5 HOH B 11 258 41 HOH HOH . L 5 HOH B 12 259 43 HOH HOH . L 5 HOH B 13 260 44 HOH HOH . L 5 HOH B 14 261 50 HOH HOH . L 5 HOH B 15 262 53 HOH HOH . L 5 HOH B 16 263 57 HOH HOH . L 5 HOH B 17 264 63 HOH HOH . L 5 HOH B 18 265 66 HOH HOH . L 5 HOH B 19 266 67 HOH HOH . L 5 HOH B 20 267 73 HOH HOH . L 5 HOH B 21 268 75 HOH HOH . L 5 HOH B 22 269 76 HOH HOH . L 5 HOH B 23 270 77 HOH HOH . L 5 HOH B 24 271 78 HOH HOH . L 5 HOH B 25 272 83 HOH HOH . L 5 HOH B 26 273 88 HOH HOH . L 5 HOH B 27 274 91 HOH HOH . L 5 HOH B 28 275 92 HOH HOH . L 5 HOH B 29 276 93 HOH HOH . L 5 HOH B 30 277 94 HOH HOH . L 5 HOH B 31 278 96 HOH HOH . L 5 HOH B 32 279 98 HOH HOH . L 5 HOH B 33 280 101 HOH HOH . L 5 HOH B 34 281 103 HOH HOH . L 5 HOH B 35 282 104 HOH HOH . L 5 HOH B 36 283 106 HOH HOH . L 5 HOH B 37 284 109 HOH HOH . L 5 HOH B 38 285 110 HOH HOH . L 5 HOH B 39 286 116 HOH HOH . L 5 HOH B 40 287 117 HOH HOH . L 5 HOH B 41 288 120 HOH HOH . L 5 HOH B 42 289 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 4 44.438 54.403 56.283 0.55 59.59 ? S SO4 247 B 1 HETATM 2 O O1 SO4 . . . J 4 45.456 55.36 55.852 0.55 57.17 ? O1 SO4 247 B 1 HETATM 3 O O2 SO4 . . . J 4 44.155 53.46 55.202 0.55 56.18 ? O2 SO4 247 B 1 HETATM 4 O O3 SO4 . . . J 4 44.96 53.612 57.406 0.55 57.92 ? O3 SO4 247 B 1 HETATM 5 O O4 SO4 . . . J 4 43.233 55.127 56.72 0.55 56.65 ? O4 SO4 247 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #