data_3ILT # _model_server_result.job_id PQChBeV0Hphpzufh4mhDxw _model_server_result.datetime_utc '2024-11-08 01:17:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ilt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":3}' # _entry.id 3ILT # _exptl.entry_id 3ILT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ILT _cell.length_a 45.182 _cell.length_b 107.819 _cell.length_c 157.912 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ILT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 I N N ? 3 L N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 203 B CYS 206 1_555 A SG CYS 258 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 B SG CYS 203 E CYS 206 1_555 B SG CYS 258 E CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 C SG CYS 203 H CYS 206 1_555 C SG CYS 258 H CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc1 E ZN ZN . B ZN 1 1_555 A OE1 GLU 39 B GLU 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc2 E ZN ZN . B ZN 1 1_555 A NE2 HIS 43 B HIS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc3 E ZN ZN . B ZN 1 1_555 C OE2 GLU 163 H GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc4 E ZN ZN . B ZN 1 1_555 C OE1 GLU 163 H GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.733 ? metalc ? metalc5 B OE1 GLU 39 E GLU 42 1_555 I ZN ZN . E ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc6 L ZN ZN . H ZN 3 1_555 C NE2 HIS 20 H HIS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc7 L ZN ZN . H ZN 3 1_555 C OE2 GLU 27 H GLU 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc8 C OE2 GLU 39 H GLU 42 1_555 M ZN ZN . H ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc9 C NE2 HIS 43 H HIS 46 1_555 M ZN ZN . H ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ILT _atom_sites.fract_transf_matrix[1][1] 0.022133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009275 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GLU B 1 400 400 GLU GLU . E 3 ZN B 1 1 1 ZN ZN . F 3 ZN B 1 2 2 ZN ZN . G 4 TRU B 1 800 800 TRU TRU . H 2 GLU E 1 400 400 GLU GLU . I 3 ZN E 1 262 262 ZN ZN . J 4 TRU E 1 800 800 TRU TRU . K 2 GLU H 1 400 400 GLU GLU . L 3 ZN H 1 3 3 ZN ZN . M 3 ZN H 1 262 262 ZN ZN . N 4 TRU H 1 800 800 TRU TRU . O 5 HOH B 1 3 3 HOH HOH . O 5 HOH B 2 262 262 HOH HOH . O 5 HOH B 3 263 263 HOH HOH . O 5 HOH B 4 264 264 HOH HOH . O 5 HOH B 5 265 265 HOH HOH . O 5 HOH B 6 266 266 HOH HOH . O 5 HOH B 7 267 267 HOH HOH . O 5 HOH B 8 268 268 HOH HOH . O 5 HOH B 9 269 269 HOH HOH . O 5 HOH B 10 270 270 HOH HOH . O 5 HOH B 11 271 271 HOH HOH . O 5 HOH B 12 272 272 HOH HOH . O 5 HOH B 13 273 273 HOH HOH . O 5 HOH B 14 274 274 HOH HOH . O 5 HOH B 15 275 275 HOH HOH . O 5 HOH B 16 276 276 HOH HOH . O 5 HOH B 17 277 277 HOH HOH . O 5 HOH B 18 278 278 HOH HOH . O 5 HOH B 19 279 279 HOH HOH . O 5 HOH B 20 280 280 HOH HOH . O 5 HOH B 21 281 281 HOH HOH . O 5 HOH B 22 282 282 HOH HOH . O 5 HOH B 23 283 283 HOH HOH . O 5 HOH B 24 284 284 HOH HOH . O 5 HOH B 25 285 285 HOH HOH . O 5 HOH B 26 286 286 HOH HOH . O 5 HOH B 27 287 287 HOH HOH . O 5 HOH B 28 288 288 HOH HOH . O 5 HOH B 29 289 289 HOH HOH . O 5 HOH B 30 290 290 HOH HOH . O 5 HOH B 31 291 291 HOH HOH . O 5 HOH B 32 292 292 HOH HOH . O 5 HOH B 33 293 293 HOH HOH . O 5 HOH B 34 294 294 HOH HOH . O 5 HOH B 35 295 295 HOH HOH . O 5 HOH B 36 296 296 HOH HOH . O 5 HOH B 37 297 297 HOH HOH . O 5 HOH B 38 298 298 HOH HOH . O 5 HOH B 39 299 299 HOH HOH . O 5 HOH B 40 300 300 HOH HOH . O 5 HOH B 41 301 301 HOH HOH . P 5 HOH E 1 2 2 HOH HOH . P 5 HOH E 2 263 263 HOH HOH . P 5 HOH E 3 264 264 HOH HOH . P 5 HOH E 4 265 265 HOH HOH . P 5 HOH E 5 266 266 HOH HOH . P 5 HOH E 6 267 267 HOH HOH . P 5 HOH E 7 268 268 HOH HOH . P 5 HOH E 8 269 269 HOH HOH . P 5 HOH E 9 270 270 HOH HOH . P 5 HOH E 10 271 271 HOH HOH . P 5 HOH E 11 272 272 HOH HOH . P 5 HOH E 12 273 273 HOH HOH . P 5 HOH E 13 274 274 HOH HOH . P 5 HOH E 14 275 275 HOH HOH . P 5 HOH E 15 276 276 HOH HOH . P 5 HOH E 16 277 277 HOH HOH . P 5 HOH E 17 278 278 HOH HOH . P 5 HOH E 18 279 279 HOH HOH . P 5 HOH E 19 280 280 HOH HOH . P 5 HOH E 20 281 281 HOH HOH . P 5 HOH E 21 282 282 HOH HOH . P 5 HOH E 22 283 283 HOH HOH . P 5 HOH E 23 284 284 HOH HOH . P 5 HOH E 24 285 285 HOH HOH . P 5 HOH E 25 286 286 HOH HOH . P 5 HOH E 26 287 287 HOH HOH . P 5 HOH E 27 288 288 HOH HOH . P 5 HOH E 28 289 289 HOH HOH . P 5 HOH E 29 290 290 HOH HOH . P 5 HOH E 30 291 291 HOH HOH . P 5 HOH E 31 292 292 HOH HOH . P 5 HOH E 32 293 293 HOH HOH . P 5 HOH E 33 294 294 HOH HOH . P 5 HOH E 34 295 295 HOH HOH . P 5 HOH E 35 296 296 HOH HOH . P 5 HOH E 36 297 297 HOH HOH . P 5 HOH E 37 298 298 HOH HOH . P 5 HOH E 38 299 299 HOH HOH . P 5 HOH E 39 300 300 HOH HOH . P 5 HOH E 40 301 301 HOH HOH . P 5 HOH E 41 302 302 HOH HOH . P 5 HOH E 42 303 303 HOH HOH . P 5 HOH E 43 304 304 HOH HOH . P 5 HOH E 44 305 305 HOH HOH . P 5 HOH E 45 306 306 HOH HOH . P 5 HOH E 46 307 307 HOH HOH . P 5 HOH E 47 308 308 HOH HOH . P 5 HOH E 48 309 309 HOH HOH . P 5 HOH E 49 310 310 HOH HOH . P 5 HOH E 50 311 311 HOH HOH . Q 5 HOH H 1 263 263 HOH HOH . Q 5 HOH H 2 264 264 HOH HOH . Q 5 HOH H 3 265 265 HOH HOH . Q 5 HOH H 4 266 266 HOH HOH . Q 5 HOH H 5 267 267 HOH HOH . Q 5 HOH H 6 268 268 HOH HOH . Q 5 HOH H 7 269 269 HOH HOH . Q 5 HOH H 8 270 270 HOH HOH . Q 5 HOH H 9 271 271 HOH HOH . Q 5 HOH H 10 272 272 HOH HOH . Q 5 HOH H 11 273 273 HOH HOH . Q 5 HOH H 12 274 274 HOH HOH . Q 5 HOH H 13 275 275 HOH HOH . Q 5 HOH H 14 276 276 HOH HOH . Q 5 HOH H 15 277 277 HOH HOH . Q 5 HOH H 16 278 278 HOH HOH . Q 5 HOH H 17 279 279 HOH HOH . Q 5 HOH H 18 280 280 HOH HOH . Q 5 HOH H 19 281 281 HOH HOH . Q 5 HOH H 20 282 282 HOH HOH . Q 5 HOH H 21 283 283 HOH HOH . Q 5 HOH H 22 284 284 HOH HOH . Q 5 HOH H 23 285 285 HOH HOH . Q 5 HOH H 24 286 286 HOH HOH . Q 5 HOH H 25 287 287 HOH HOH . Q 5 HOH H 26 288 288 HOH HOH . Q 5 HOH H 27 289 289 HOH HOH . Q 5 HOH H 28 290 290 HOH HOH . Q 5 HOH H 29 291 291 HOH HOH . Q 5 HOH H 30 292 292 HOH HOH . Q 5 HOH H 31 293 293 HOH HOH . Q 5 HOH H 32 294 294 HOH HOH . Q 5 HOH H 33 295 295 HOH HOH . Q 5 HOH H 34 296 296 HOH HOH . Q 5 HOH H 35 297 297 HOH HOH . Q 5 HOH H 36 298 298 HOH HOH . Q 5 HOH H 37 299 299 HOH HOH . Q 5 HOH H 38 300 300 HOH HOH . Q 5 HOH H 39 301 301 HOH HOH . Q 5 HOH H 40 302 302 HOH HOH . Q 5 HOH H 41 304 304 HOH HOH . Q 5 HOH H 42 305 305 HOH HOH . Q 5 HOH H 43 306 306 HOH HOH . Q 5 HOH H 44 307 307 HOH HOH . Q 5 HOH H 45 308 308 HOH HOH . Q 5 HOH H 46 309 309 HOH HOH . Q 5 HOH H 47 310 310 HOH HOH . Q 5 HOH H 48 311 311 HOH HOH . Q 5 HOH H 49 312 312 HOH HOH . Q 5 HOH H 50 313 313 HOH HOH . Q 5 HOH H 51 314 314 HOH HOH . Q 5 HOH H 52 315 315 HOH HOH . Q 5 HOH H 53 316 316 HOH HOH . Q 5 HOH H 54 317 317 HOH HOH . Q 5 HOH H 55 318 318 HOH HOH . Q 5 HOH H 56 319 319 HOH HOH . Q 5 HOH H 57 320 320 HOH HOH . Q 5 HOH H 58 321 321 HOH HOH . Q 5 HOH H 59 322 322 HOH HOH . Q 5 HOH H 60 323 323 HOH HOH . Q 5 HOH H 61 324 324 HOH HOH . Q 5 HOH H 62 325 325 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.916 _atom_site.Cartn_y 30.664 _atom_site.Cartn_z 73.732 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 3 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #