data_3IMK # _model_server_result.job_id 6QsGKcK94jaZn4VPfYZVKw _model_server_result.datetime_utc '2024-11-05 00:36:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3imk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":161}' # _entry.id 3IMK # _exptl.entry_id 3IMK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IMK _cell.length_a 41.25 _cell.length_b 59.255 _cell.length_c 64.953 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IMK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C MSE 2 A MSE 1 1_555 A N ASP 3 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 A C GLU 57 A GLU 56 1_555 A N MSE 58 A MSE 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 A C MSE 58 A MSE 57 1_555 A N PRO 59 A PRO 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C THR 149 A THR 148 1_555 A N MSE 150 A MSE 149 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.345 ? covale ? covale6 A C THR 149 A THR 148 1_555 A N MSE 150 A MSE 149 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C MSE 150 A MSE 149 1_555 A N ASP 151 A ASP 150 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 A C MSE 150 A MSE 149 1_555 A N ASP 151 A ASP 150 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IMK _atom_sites.fract_transf_matrix[1][1] 0.024242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 158 1 GOL GOL . C 2 GOL A 1 159 2 GOL GOL . D 3 MES A 1 160 3 MES MES . E 4 PG4 A 1 161 4 PG4 PG4 . F 5 PG6 A 1 162 5 PG6 PG6 . G 6 HOH A 1 163 163 HOH HOH . G 6 HOH A 2 164 164 HOH HOH . G 6 HOH A 3 165 165 HOH HOH . G 6 HOH A 4 166 166 HOH HOH . G 6 HOH A 5 167 167 HOH HOH . G 6 HOH A 6 168 168 HOH HOH . G 6 HOH A 7 169 169 HOH HOH . G 6 HOH A 8 170 170 HOH HOH . G 6 HOH A 9 171 171 HOH HOH . G 6 HOH A 10 172 172 HOH HOH . G 6 HOH A 11 173 173 HOH HOH . G 6 HOH A 12 174 174 HOH HOH . G 6 HOH A 13 175 175 HOH HOH . G 6 HOH A 14 176 176 HOH HOH . G 6 HOH A 15 177 177 HOH HOH . G 6 HOH A 16 178 178 HOH HOH . G 6 HOH A 17 179 179 HOH HOH . G 6 HOH A 18 180 180 HOH HOH . G 6 HOH A 19 181 181 HOH HOH . G 6 HOH A 20 182 182 HOH HOH . G 6 HOH A 21 183 183 HOH HOH . G 6 HOH A 22 184 184 HOH HOH . G 6 HOH A 23 185 185 HOH HOH . G 6 HOH A 24 186 186 HOH HOH . G 6 HOH A 25 187 187 HOH HOH . G 6 HOH A 26 188 188 HOH HOH . G 6 HOH A 27 189 189 HOH HOH . G 6 HOH A 28 190 190 HOH HOH . G 6 HOH A 29 191 191 HOH HOH . G 6 HOH A 30 192 192 HOH HOH . G 6 HOH A 31 193 193 HOH HOH . G 6 HOH A 32 194 194 HOH HOH . G 6 HOH A 33 195 195 HOH HOH . G 6 HOH A 34 196 196 HOH HOH . G 6 HOH A 35 197 197 HOH HOH . G 6 HOH A 36 198 198 HOH HOH . G 6 HOH A 37 199 199 HOH HOH . G 6 HOH A 38 200 200 HOH HOH . G 6 HOH A 39 201 201 HOH HOH . G 6 HOH A 40 202 202 HOH HOH . G 6 HOH A 41 203 203 HOH HOH . G 6 HOH A 42 204 204 HOH HOH . G 6 HOH A 43 205 205 HOH HOH . G 6 HOH A 44 206 206 HOH HOH . G 6 HOH A 45 207 207 HOH HOH . G 6 HOH A 46 208 208 HOH HOH . G 6 HOH A 47 209 6 HOH HOH . G 6 HOH A 48 210 7 HOH HOH . G 6 HOH A 49 211 8 HOH HOH . G 6 HOH A 50 212 9 HOH HOH . G 6 HOH A 51 213 10 HOH HOH . G 6 HOH A 52 214 11 HOH HOH . G 6 HOH A 53 215 12 HOH HOH . G 6 HOH A 54 216 13 HOH HOH . G 6 HOH A 55 217 14 HOH HOH . G 6 HOH A 56 218 15 HOH HOH . G 6 HOH A 57 219 16 HOH HOH . G 6 HOH A 58 220 17 HOH HOH . G 6 HOH A 59 221 18 HOH HOH . G 6 HOH A 60 222 19 HOH HOH . G 6 HOH A 61 223 20 HOH HOH . G 6 HOH A 62 224 21 HOH HOH . G 6 HOH A 63 225 22 HOH HOH . G 6 HOH A 64 226 23 HOH HOH . G 6 HOH A 65 227 24 HOH HOH . G 6 HOH A 66 228 25 HOH HOH . G 6 HOH A 67 229 26 HOH HOH . G 6 HOH A 68 230 27 HOH HOH . G 6 HOH A 69 231 28 HOH HOH . G 6 HOH A 70 232 29 HOH HOH . G 6 HOH A 71 233 30 HOH HOH . G 6 HOH A 72 234 31 HOH HOH . G 6 HOH A 73 235 32 HOH HOH . G 6 HOH A 74 236 33 HOH HOH . G 6 HOH A 75 237 34 HOH HOH . G 6 HOH A 76 238 35 HOH HOH . G 6 HOH A 77 239 36 HOH HOH . G 6 HOH A 78 240 37 HOH HOH . G 6 HOH A 79 241 38 HOH HOH . G 6 HOH A 80 242 39 HOH HOH . G 6 HOH A 81 243 40 HOH HOH . G 6 HOH A 82 244 41 HOH HOH . G 6 HOH A 83 245 42 HOH HOH . G 6 HOH A 84 246 43 HOH HOH . G 6 HOH A 85 247 44 HOH HOH . G 6 HOH A 86 248 45 HOH HOH . G 6 HOH A 87 249 46 HOH HOH . G 6 HOH A 88 250 47 HOH HOH . G 6 HOH A 89 251 48 HOH HOH . G 6 HOH A 90 252 49 HOH HOH . G 6 HOH A 91 253 50 HOH HOH . G 6 HOH A 92 254 51 HOH HOH . G 6 HOH A 93 255 52 HOH HOH . G 6 HOH A 94 256 53 HOH HOH . G 6 HOH A 95 257 54 HOH HOH . G 6 HOH A 96 258 55 HOH HOH . G 6 HOH A 97 259 56 HOH HOH . G 6 HOH A 98 260 57 HOH HOH . G 6 HOH A 99 261 58 HOH HOH . G 6 HOH A 100 262 59 HOH HOH . G 6 HOH A 101 263 60 HOH HOH . G 6 HOH A 102 264 61 HOH HOH . G 6 HOH A 103 265 62 HOH HOH . G 6 HOH A 104 266 63 HOH HOH . G 6 HOH A 105 267 64 HOH HOH . G 6 HOH A 106 268 65 HOH HOH . G 6 HOH A 107 269 66 HOH HOH . G 6 HOH A 108 270 67 HOH HOH . G 6 HOH A 109 271 68 HOH HOH . G 6 HOH A 110 272 69 HOH HOH . G 6 HOH A 111 273 70 HOH HOH . G 6 HOH A 112 274 71 HOH HOH . G 6 HOH A 113 275 72 HOH HOH . G 6 HOH A 114 276 73 HOH HOH . G 6 HOH A 115 277 74 HOH HOH . G 6 HOH A 116 278 75 HOH HOH . G 6 HOH A 117 279 76 HOH HOH . G 6 HOH A 118 280 77 HOH HOH . G 6 HOH A 119 281 78 HOH HOH . G 6 HOH A 120 282 79 HOH HOH . G 6 HOH A 121 283 80 HOH HOH . G 6 HOH A 122 284 81 HOH HOH . G 6 HOH A 123 285 82 HOH HOH . G 6 HOH A 124 286 83 HOH HOH . G 6 HOH A 125 287 84 HOH HOH . G 6 HOH A 126 288 85 HOH HOH . G 6 HOH A 127 289 86 HOH HOH . G 6 HOH A 128 290 87 HOH HOH . G 6 HOH A 129 291 88 HOH HOH . G 6 HOH A 130 292 89 HOH HOH . G 6 HOH A 131 293 90 HOH HOH . G 6 HOH A 132 294 91 HOH HOH . G 6 HOH A 133 295 92 HOH HOH . G 6 HOH A 134 296 93 HOH HOH . G 6 HOH A 135 297 94 HOH HOH . G 6 HOH A 136 298 95 HOH HOH . G 6 HOH A 137 299 96 HOH HOH . G 6 HOH A 138 300 97 HOH HOH . G 6 HOH A 139 301 98 HOH HOH . G 6 HOH A 140 302 99 HOH HOH . G 6 HOH A 141 303 100 HOH HOH . G 6 HOH A 142 304 101 HOH HOH . G 6 HOH A 143 305 102 HOH HOH . G 6 HOH A 144 306 103 HOH HOH . G 6 HOH A 145 307 104 HOH HOH . G 6 HOH A 146 308 105 HOH HOH . G 6 HOH A 147 309 106 HOH HOH . G 6 HOH A 148 310 107 HOH HOH . G 6 HOH A 149 311 108 HOH HOH . G 6 HOH A 150 312 109 HOH HOH . G 6 HOH A 151 313 110 HOH HOH . G 6 HOH A 152 314 111 HOH HOH . G 6 HOH A 153 315 112 HOH HOH . G 6 HOH A 154 316 113 HOH HOH . G 6 HOH A 155 317 114 HOH HOH . G 6 HOH A 156 318 115 HOH HOH . G 6 HOH A 157 319 116 HOH HOH . G 6 HOH A 158 320 117 HOH HOH . G 6 HOH A 159 321 118 HOH HOH . G 6 HOH A 160 322 119 HOH HOH . G 6 HOH A 161 323 120 HOH HOH . G 6 HOH A 162 324 121 HOH HOH . G 6 HOH A 163 325 122 HOH HOH . G 6 HOH A 164 326 123 HOH HOH . G 6 HOH A 165 327 124 HOH HOH . G 6 HOH A 166 328 125 HOH HOH . G 6 HOH A 167 329 126 HOH HOH . G 6 HOH A 168 330 127 HOH HOH . G 6 HOH A 169 331 128 HOH HOH . G 6 HOH A 170 332 129 HOH HOH . G 6 HOH A 171 333 130 HOH HOH . G 6 HOH A 172 334 131 HOH HOH . G 6 HOH A 173 335 132 HOH HOH . G 6 HOH A 174 336 133 HOH HOH . G 6 HOH A 175 337 134 HOH HOH . G 6 HOH A 176 338 135 HOH HOH . G 6 HOH A 177 339 136 HOH HOH . G 6 HOH A 178 340 137 HOH HOH . G 6 HOH A 179 341 138 HOH HOH . G 6 HOH A 180 342 139 HOH HOH . G 6 HOH A 181 343 140 HOH HOH . G 6 HOH A 182 344 141 HOH HOH . G 6 HOH A 183 345 142 HOH HOH . G 6 HOH A 184 346 143 HOH HOH . G 6 HOH A 185 347 144 HOH HOH . G 6 HOH A 186 348 145 HOH HOH . G 6 HOH A 187 349 146 HOH HOH . G 6 HOH A 188 350 147 HOH HOH . G 6 HOH A 189 351 148 HOH HOH . G 6 HOH A 190 352 149 HOH HOH . G 6 HOH A 191 353 150 HOH HOH . G 6 HOH A 192 354 151 HOH HOH . G 6 HOH A 193 355 152 HOH HOH . G 6 HOH A 194 356 153 HOH HOH . G 6 HOH A 195 357 154 HOH HOH . G 6 HOH A 196 358 155 HOH HOH . G 6 HOH A 197 359 156 HOH HOH . G 6 HOH A 198 360 157 HOH HOH . G 6 HOH A 199 361 158 HOH HOH . G 6 HOH A 200 362 159 HOH HOH . G 6 HOH A 201 363 160 HOH HOH . G 6 HOH A 202 364 161 HOH HOH . G 6 HOH A 203 365 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . E 4 37.874 -0.196 -1.928 0.9 51 ? O1 PG4 161 A 1 HETATM 2 C C1 PG4 . . . E 4 38.451 1.124 -1.898 0.9 47.87 ? C1 PG4 161 A 1 HETATM 3 C C2 PG4 . . . E 4 38.615 1.61 -0.466 0.9 39.34 ? C2 PG4 161 A 1 HETATM 4 O O2 PG4 . . . E 4 37.567 1.095 0.362 0.9 47.9 ? O2 PG4 161 A 1 HETATM 5 C C3 PG4 . . . E 4 37.558 1.672 1.677 0.9 46.7 ? C3 PG4 161 A 1 HETATM 6 C C4 PG4 . . . E 4 36.699 0.854 2.648 0.9 47.52 ? C4 PG4 161 A 1 HETATM 7 O O3 PG4 . . . E 4 35.31 1.242 2.611 0.9 45.03 ? O3 PG4 161 A 1 HETATM 8 C C5 PG4 . . . E 4 34.523 0.609 3.627 0.9 32.34 ? C5 PG4 161 A 1 HETATM 9 C C6 PG4 . . . E 4 33.2 0.09 3.071 0.9 34.38 ? C6 PG4 161 A 1 HETATM 10 O O4 PG4 . . . E 4 33.363 -0.534 1.785 0.9 28.03 ? O4 PG4 161 A 1 HETATM 11 C C7 PG4 . . . E 4 32.25 -1.387 1.564 0.9 21.75 ? C7 PG4 161 A 1 HETATM 12 C C8 PG4 . . . E 4 31.916 -1.526 0.097 0.9 18.72 ? C8 PG4 161 A 1 HETATM 13 O O5 PG4 . . . E 4 33.018 -1.902 -0.724 0.9 22.87 ? O5 PG4 161 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #