data_3INU # _model_server_result.job_id Q6GljfkdCnNfRN_k1F9Mtw _model_server_result.datetime_utc '2025-03-04 23:32:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3inu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":232}' # _entry.id 3INU # _exptl.entry_id 3INU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3INU _cell.length_a 129.52 _cell.length_b 129.52 _cell.length_c 184.96 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3INU _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,Q,R 1 1 C,D,K,L,M,N,O,P,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N ? 4 N N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 152 H CYS 142 1_555 A SG CYS 208 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 94 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf4 B SG CYS 140 L CYS 134 1_555 B SG CYS 200 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 C SG CYS 22 M CYS 22 1_555 C SG CYS 96 M CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 C SG CYS 152 M CYS 142 1_555 C SG CYS 208 M CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf7 D SG CYS 23 N CYS 23 1_555 D SG CYS 94 N CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf8 D SG CYS 140 N CYS 134 1_555 D SG CYS 200 N CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3INU _atom_sites.fract_transf_matrix[1][1] 0.007721 _atom_sites.fract_transf_matrix[1][2] 0.004458 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 H 1 229 1 SO4 SO4 . F 3 SO4 H 1 230 2 SO4 SO4 . G 3 SO4 H 1 231 3 SO4 SO4 . H 4 GOL H 1 232 1 GOL GOL . I 3 SO4 L 1 212 8 SO4 SO4 . J 4 GOL L 1 213 3 GOL GOL . K 3 SO4 M 1 229 4 SO4 SO4 . L 3 SO4 M 1 230 5 SO4 SO4 . M 3 SO4 M 1 231 6 SO4 SO4 . N 4 GOL M 1 232 2 GOL GOL . O 3 SO4 N 1 212 7 SO4 SO4 . P 4 GOL N 1 213 4 GOL GOL . Q 5 HOH H 1 233 1 HOH HOH . Q 5 HOH H 2 234 10 HOH HOH . Q 5 HOH H 3 235 15 HOH HOH . Q 5 HOH H 4 236 17 HOH HOH . Q 5 HOH H 5 237 18 HOH HOH . Q 5 HOH H 6 238 19 HOH HOH . Q 5 HOH H 7 239 20 HOH HOH . Q 5 HOH H 8 240 22 HOH HOH . Q 5 HOH H 9 241 24 HOH HOH . Q 5 HOH H 10 242 31 HOH HOH . Q 5 HOH H 11 243 32 HOH HOH . Q 5 HOH H 12 244 40 HOH HOH . Q 5 HOH H 13 245 41 HOH HOH . Q 5 HOH H 14 246 46 HOH HOH . Q 5 HOH H 15 247 51 HOH HOH . Q 5 HOH H 16 248 52 HOH HOH . Q 5 HOH H 17 249 54 HOH HOH . Q 5 HOH H 18 250 55 HOH HOH . Q 5 HOH H 19 251 64 HOH HOH . Q 5 HOH H 20 252 68 HOH HOH . Q 5 HOH H 21 253 69 HOH HOH . Q 5 HOH H 22 254 70 HOH HOH . Q 5 HOH H 23 255 73 HOH HOH . R 5 HOH L 1 214 8 HOH HOH . R 5 HOH L 2 215 12 HOH HOH . R 5 HOH L 3 216 13 HOH HOH . R 5 HOH L 4 217 16 HOH HOH . R 5 HOH L 5 218 23 HOH HOH . R 5 HOH L 6 219 28 HOH HOH . R 5 HOH L 7 220 42 HOH HOH . R 5 HOH L 8 221 44 HOH HOH . R 5 HOH L 9 222 49 HOH HOH . R 5 HOH L 10 223 50 HOH HOH . R 5 HOH L 11 224 57 HOH HOH . R 5 HOH L 12 225 60 HOH HOH . R 5 HOH L 13 226 63 HOH HOH . R 5 HOH L 14 227 65 HOH HOH . R 5 HOH L 15 228 66 HOH HOH . R 5 HOH L 16 229 67 HOH HOH . R 5 HOH L 17 230 71 HOH HOH . S 5 HOH M 1 233 4 HOH HOH . S 5 HOH M 2 234 5 HOH HOH . S 5 HOH M 3 235 7 HOH HOH . S 5 HOH M 4 236 9 HOH HOH . S 5 HOH M 5 237 21 HOH HOH . S 5 HOH M 6 238 26 HOH HOH . S 5 HOH M 7 239 30 HOH HOH . S 5 HOH M 8 240 35 HOH HOH . S 5 HOH M 9 241 36 HOH HOH . S 5 HOH M 10 242 37 HOH HOH . S 5 HOH M 11 243 38 HOH HOH . S 5 HOH M 12 244 47 HOH HOH . S 5 HOH M 13 245 53 HOH HOH . S 5 HOH M 14 246 74 HOH HOH . S 5 HOH M 15 247 75 HOH HOH . T 5 HOH N 1 214 2 HOH HOH . T 5 HOH N 2 215 3 HOH HOH . T 5 HOH N 3 216 6 HOH HOH . T 5 HOH N 4 217 11 HOH HOH . T 5 HOH N 5 218 14 HOH HOH . T 5 HOH N 6 219 25 HOH HOH . T 5 HOH N 7 220 27 HOH HOH . T 5 HOH N 8 221 29 HOH HOH . T 5 HOH N 9 222 33 HOH HOH . T 5 HOH N 10 223 34 HOH HOH . T 5 HOH N 11 224 39 HOH HOH . T 5 HOH N 12 225 43 HOH HOH . T 5 HOH N 13 226 45 HOH HOH . T 5 HOH N 14 227 48 HOH HOH . T 5 HOH N 15 228 56 HOH HOH . T 5 HOH N 16 229 58 HOH HOH . T 5 HOH N 17 230 59 HOH HOH . T 5 HOH N 18 231 61 HOH HOH . T 5 HOH N 19 232 62 HOH HOH . T 5 HOH N 20 233 72 HOH HOH . T 5 HOH N 21 234 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 4 -45.877 46.323 -174.249 1 74.85 ? C1 GOL 232 M 1 HETATM 2 O O1 GOL . . . N 4 -45.006 45.298 -173.827 1 73.47 ? O1 GOL 232 M 1 HETATM 3 C C2 GOL . . . N 4 -46.114 46.239 -175.759 1 72.35 ? C2 GOL 232 M 1 HETATM 4 O O2 GOL . . . N 4 -46.457 44.926 -176.192 1 52.77 ? O2 GOL 232 M 1 HETATM 5 C C3 GOL . . . N 4 -47.236 47.217 -176.086 1 80.81 ? C3 GOL 232 M 1 HETATM 6 O O3 GOL . . . N 4 -47.218 47.486 -177.469 1 86.03 ? O3 GOL 232 M 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #