data_3IO5 # _model_server_result.job_id 5b3IQvuextmXmGULiNWy3A _model_server_result.datetime_utc '2024-11-09 02:32:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3io5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3IO5 # _exptl.entry_id 3IO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3IO5 _cell.length_a 95.974 _cell.length_b 95.974 _cell.length_c 131.274 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3IO5 _atom_sites.fract_transf_matrix[1][1] 0.010419 _atom_sites.fract_transf_matrix[1][2] 0.006016 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007618 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 1 1 PO4 PO4 . D 2 PO4 B 1 2 2 PO4 PO4 . E 3 HOH A 1 2 2 HOH HOH . E 3 HOH A 2 5 5 HOH HOH . E 3 HOH A 3 7 7 HOH HOH . E 3 HOH A 4 9 9 HOH HOH . E 3 HOH A 5 11 11 HOH HOH . E 3 HOH A 6 12 12 HOH HOH . E 3 HOH A 7 13 13 HOH HOH . E 3 HOH A 8 14 14 HOH HOH . E 3 HOH A 9 15 15 HOH HOH . E 3 HOH A 10 16 16 HOH HOH . E 3 HOH A 11 17 17 HOH HOH . E 3 HOH A 12 18 18 HOH HOH . E 3 HOH A 13 19 19 HOH HOH . E 3 HOH A 14 20 20 HOH HOH . E 3 HOH A 15 21 21 HOH HOH . E 3 HOH A 16 359 31 HOH HOH . E 3 HOH A 17 360 32 HOH HOH . E 3 HOH A 18 361 33 HOH HOH . E 3 HOH A 19 362 34 HOH HOH . E 3 HOH A 20 363 35 HOH HOH . E 3 HOH A 21 364 36 HOH HOH . E 3 HOH A 22 365 37 HOH HOH . E 3 HOH A 23 366 38 HOH HOH . E 3 HOH A 24 367 39 HOH HOH . E 3 HOH A 25 368 50 HOH HOH . E 3 HOH A 26 369 52 HOH HOH . E 3 HOH A 27 370 53 HOH HOH . F 3 HOH B 1 1 1 HOH HOH . F 3 HOH B 2 3 3 HOH HOH . F 3 HOH B 3 4 4 HOH HOH . F 3 HOH B 4 6 6 HOH HOH . F 3 HOH B 5 8 8 HOH HOH . F 3 HOH B 6 10 10 HOH HOH . F 3 HOH B 7 22 22 HOH HOH . F 3 HOH B 8 23 23 HOH HOH . F 3 HOH B 9 24 24 HOH HOH . F 3 HOH B 10 25 25 HOH HOH . F 3 HOH B 11 359 26 HOH HOH . F 3 HOH B 12 360 27 HOH HOH . F 3 HOH B 13 361 28 HOH HOH . F 3 HOH B 14 362 29 HOH HOH . F 3 HOH B 15 363 30 HOH HOH . F 3 HOH B 16 364 40 HOH HOH . F 3 HOH B 17 365 41 HOH HOH . F 3 HOH B 18 366 42 HOH HOH . F 3 HOH B 19 367 43 HOH HOH . F 3 HOH B 20 368 44 HOH HOH . F 3 HOH B 21 369 45 HOH HOH . F 3 HOH B 22 370 46 HOH HOH . F 3 HOH B 23 371 47 HOH HOH . F 3 HOH B 24 372 48 HOH HOH . F 3 HOH B 25 373 49 HOH HOH . F 3 HOH B 26 374 51 HOH HOH . F 3 HOH B 27 375 54 HOH HOH . F 3 HOH B 28 376 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 -21.868 27.397 105.743 1 27.3 ? P PO4 2 B 1 HETATM 2 O O1 PO4 . . . D 2 -20.587 28.082 106.076 1 27.87 ? O1 PO4 2 B 1 HETATM 3 O O2 PO4 . . . D 2 -22.354 27.732 104.343 1 26.91 ? O2 PO4 2 B 1 HETATM 4 O O3 PO4 . . . D 2 -21.659 25.927 105.891 1 28.91 ? O3 PO4 2 B 1 HETATM 5 O O4 PO4 . . . D 2 -22.985 27.909 106.587 1 28.59 ? O4 PO4 2 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #