data_3IOQ
#
_model_server_result.job_id            XSVOz_AmtJPHOVXU0_EHSw 
_model_server_result.datetime_utc      '2024-11-25 08:17:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ioq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":508}' 
#
_entry.id    3IOQ 
#
_exptl.entry_id    3IOQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3IOQ 
_cell.length_a            73.639 
_cell.length_b            73.639 
_cell.length_c            118.786 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3IOQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
disulf ? disulf3 A SG CYS 153 A CYS 153 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
covale covalent covale1 A SG CYS 25 A CYS 25 1_555 B C2 E64 . A E64 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 137 n n 
C1 C2 EDO sing 138 n n 
C1 H11 EDO sing 139 n n 
C1 H12 EDO sing 140 n n 
O1 HO1 EDO sing 141 n n 
C2 O2 EDO sing 142 n n 
C2 H21 EDO sing 143 n n 
C2 H22 EDO sing 144 n n 
O2 HO2 EDO sing 145 n n 
#
_atom_sites.entry_id                     3IOQ 
_atom_sites.fract_transf_matrix[1][1]    0.01358 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01358 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008419 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 E64 A 1 301 301 E64 E64 . 
C 3 SO4 A 1 401 401 SO4 SO4 . 
D 3 SO4 A 1 402 402 SO4 SO4 . 
E 3 SO4 A 1 403 403 SO4 SO4 . 
F 3 SO4 A 1 404 404 SO4 SO4 . 
G 3 SO4 A 1 405 405 SO4 SO4 . 
H 3 SO4 A 1 406 406 SO4 SO4 . 
I 3 SO4 A 1 407 407 SO4 SO4 . 
J 3 SO4 A 1 408 408 SO4 SO4 . 
K 4 EDO A 1 501 501 EDO EDO . 
L 4 EDO A 1 502 502 EDO EDO . 
M 4 EDO A 1 503 503 EDO EDO . 
N 4 EDO A 1 504 504 EDO EDO . 
O 4 EDO A 1 505 505 EDO EDO . 
P 4 EDO A 1 506 506 EDO EDO . 
Q 4 EDO A 1 507 507 EDO EDO . 
R 4 EDO A 1 508 508 EDO EDO . 
S 4 EDO A 1 509 509 EDO EDO . 
T 4 EDO A 1 510 510 EDO EDO . 
U 5 HOH A 1 217 1 HOH HOH . 
U 5 HOH A 2 218 2 HOH HOH . 
U 5 HOH A 3 219 3 HOH HOH . 
U 5 HOH A 4 220 4 HOH HOH . 
U 5 HOH A 5 221 5 HOH HOH . 
U 5 HOH A 6 222 6 HOH HOH . 
U 5 HOH A 7 223 7 HOH HOH . 
U 5 HOH A 8 224 8 HOH HOH . 
U 5 HOH A 9 225 9 HOH HOH . 
U 5 HOH A 10 226 10 HOH HOH . 
U 5 HOH A 11 227 11 HOH HOH . 
U 5 HOH A 12 228 12 HOH HOH . 
U 5 HOH A 13 229 13 HOH HOH . 
U 5 HOH A 14 230 14 HOH HOH . 
U 5 HOH A 15 231 15 HOH HOH . 
U 5 HOH A 16 232 16 HOH HOH . 
U 5 HOH A 17 233 17 HOH HOH . 
U 5 HOH A 18 234 18 HOH HOH . 
U 5 HOH A 19 235 19 HOH HOH . 
U 5 HOH A 20 236 20 HOH HOH . 
U 5 HOH A 21 237 21 HOH HOH . 
U 5 HOH A 22 238 22 HOH HOH . 
U 5 HOH A 23 239 23 HOH HOH . 
U 5 HOH A 24 240 24 HOH HOH . 
U 5 HOH A 25 241 25 HOH HOH . 
U 5 HOH A 26 242 26 HOH HOH . 
U 5 HOH A 27 243 27 HOH HOH . 
U 5 HOH A 28 244 28 HOH HOH . 
U 5 HOH A 29 245 29 HOH HOH . 
U 5 HOH A 30 246 30 HOH HOH . 
U 5 HOH A 31 247 31 HOH HOH . 
U 5 HOH A 32 248 32 HOH HOH . 
U 5 HOH A 33 249 33 HOH HOH . 
U 5 HOH A 34 250 34 HOH HOH . 
U 5 HOH A 35 251 35 HOH HOH . 
U 5 HOH A 36 252 36 HOH HOH . 
U 5 HOH A 37 253 37 HOH HOH . 
U 5 HOH A 38 254 38 HOH HOH . 
U 5 HOH A 39 255 39 HOH HOH . 
U 5 HOH A 40 256 40 HOH HOH . 
U 5 HOH A 41 257 41 HOH HOH . 
U 5 HOH A 42 258 42 HOH HOH . 
U 5 HOH A 43 259 43 HOH HOH . 
U 5 HOH A 44 260 44 HOH HOH . 
U 5 HOH A 45 261 45 HOH HOH . 
U 5 HOH A 46 262 46 HOH HOH . 
U 5 HOH A 47 263 47 HOH HOH . 
U 5 HOH A 48 264 48 HOH HOH . 
U 5 HOH A 49 265 49 HOH HOH . 
U 5 HOH A 50 266 50 HOH HOH . 
U 5 HOH A 51 267 51 HOH HOH . 
U 5 HOH A 52 268 52 HOH HOH . 
U 5 HOH A 53 269 53 HOH HOH . 
U 5 HOH A 54 270 54 HOH HOH . 
U 5 HOH A 55 271 55 HOH HOH . 
U 5 HOH A 56 272 56 HOH HOH . 
U 5 HOH A 57 273 57 HOH HOH . 
U 5 HOH A 58 274 58 HOH HOH . 
U 5 HOH A 59 275 59 HOH HOH . 
U 5 HOH A 60 276 60 HOH HOH . 
U 5 HOH A 61 277 61 HOH HOH . 
U 5 HOH A 62 278 62 HOH HOH . 
U 5 HOH A 63 279 63 HOH HOH . 
U 5 HOH A 64 280 64 HOH HOH . 
U 5 HOH A 65 281 65 HOH HOH . 
U 5 HOH A 66 282 66 HOH HOH . 
U 5 HOH A 67 283 67 HOH HOH . 
U 5 HOH A 68 284 68 HOH HOH . 
U 5 HOH A 69 285 69 HOH HOH . 
U 5 HOH A 70 286 70 HOH HOH . 
U 5 HOH A 71 287 71 HOH HOH . 
U 5 HOH A 72 288 72 HOH HOH . 
U 5 HOH A 73 289 73 HOH HOH . 
U 5 HOH A 74 290 74 HOH HOH . 
U 5 HOH A 75 291 75 HOH HOH . 
U 5 HOH A 76 292 76 HOH HOH . 
U 5 HOH A 77 293 77 HOH HOH . 
U 5 HOH A 78 294 78 HOH HOH . 
U 5 HOH A 79 295 79 HOH HOH . 
U 5 HOH A 80 296 80 HOH HOH . 
U 5 HOH A 81 297 81 HOH HOH . 
U 5 HOH A 82 298 82 HOH HOH . 
U 5 HOH A 83 299 83 HOH HOH . 
U 5 HOH A 84 300 84 HOH HOH . 
U 5 HOH A 85 302 85 HOH HOH . 
U 5 HOH A 86 303 86 HOH HOH . 
U 5 HOH A 87 304 87 HOH HOH . 
U 5 HOH A 88 305 88 HOH HOH . 
U 5 HOH A 89 306 89 HOH HOH . 
U 5 HOH A 90 307 90 HOH HOH . 
U 5 HOH A 91 308 91 HOH HOH . 
U 5 HOH A 92 309 92 HOH HOH . 
U 5 HOH A 93 310 93 HOH HOH . 
U 5 HOH A 94 311 94 HOH HOH . 
U 5 HOH A 95 312 95 HOH HOH . 
U 5 HOH A 96 313 96 HOH HOH . 
U 5 HOH A 97 314 97 HOH HOH . 
U 5 HOH A 98 315 98 HOH HOH . 
U 5 HOH A 99 316 99 HOH HOH . 
U 5 HOH A 100 317 100 HOH HOH . 
U 5 HOH A 101 318 101 HOH HOH . 
U 5 HOH A 102 319 102 HOH HOH . 
U 5 HOH A 103 320 103 HOH HOH . 
U 5 HOH A 104 321 104 HOH HOH . 
U 5 HOH A 105 322 105 HOH HOH . 
U 5 HOH A 106 323 106 HOH HOH . 
U 5 HOH A 107 324 107 HOH HOH . 
U 5 HOH A 108 325 108 HOH HOH . 
U 5 HOH A 109 326 109 HOH HOH . 
U 5 HOH A 110 327 110 HOH HOH . 
U 5 HOH A 111 328 111 HOH HOH . 
U 5 HOH A 112 329 112 HOH HOH . 
U 5 HOH A 113 330 113 HOH HOH . 
U 5 HOH A 114 331 114 HOH HOH . 
U 5 HOH A 115 332 115 HOH HOH . 
U 5 HOH A 116 333 116 HOH HOH . 
U 5 HOH A 117 334 117 HOH HOH . 
U 5 HOH A 118 335 118 HOH HOH . 
U 5 HOH A 119 336 119 HOH HOH . 
U 5 HOH A 120 337 120 HOH HOH . 
U 5 HOH A 121 338 121 HOH HOH . 
U 5 HOH A 122 339 122 HOH HOH . 
U 5 HOH A 123 340 123 HOH HOH . 
U 5 HOH A 124 341 124 HOH HOH . 
U 5 HOH A 125 342 125 HOH HOH . 
U 5 HOH A 126 343 126 HOH HOH . 
U 5 HOH A 127 344 127 HOH HOH . 
U 5 HOH A 128 345 128 HOH HOH . 
U 5 HOH A 129 346 129 HOH HOH . 
U 5 HOH A 130 347 130 HOH HOH . 
U 5 HOH A 131 348 131 HOH HOH . 
U 5 HOH A 132 349 132 HOH HOH . 
U 5 HOH A 133 350 133 HOH HOH . 
U 5 HOH A 134 351 134 HOH HOH . 
U 5 HOH A 135 352 135 HOH HOH . 
U 5 HOH A 136 353 136 HOH HOH . 
U 5 HOH A 137 354 137 HOH HOH . 
U 5 HOH A 138 355 138 HOH HOH . 
U 5 HOH A 139 356 139 HOH HOH . 
U 5 HOH A 140 357 140 HOH HOH . 
U 5 HOH A 141 358 141 HOH HOH . 
U 5 HOH A 142 359 142 HOH HOH . 
U 5 HOH A 143 360 143 HOH HOH . 
U 5 HOH A 144 361 144 HOH HOH . 
U 5 HOH A 145 362 145 HOH HOH . 
U 5 HOH A 146 363 146 HOH HOH . 
U 5 HOH A 147 364 147 HOH HOH . 
U 5 HOH A 148 365 148 HOH HOH . 
U 5 HOH A 149 366 149 HOH HOH . 
U 5 HOH A 150 367 150 HOH HOH . 
U 5 HOH A 151 368 151 HOH HOH . 
U 5 HOH A 152 369 152 HOH HOH . 
U 5 HOH A 153 370 153 HOH HOH . 
U 5 HOH A 154 371 154 HOH HOH . 
U 5 HOH A 155 372 155 HOH HOH . 
U 5 HOH A 156 373 156 HOH HOH . 
U 5 HOH A 157 374 157 HOH HOH . 
U 5 HOH A 158 375 158 HOH HOH . 
U 5 HOH A 159 376 159 HOH HOH . 
U 5 HOH A 160 377 160 HOH HOH . 
U 5 HOH A 161 378 161 HOH HOH . 
U 5 HOH A 162 379 162 HOH HOH . 
U 5 HOH A 163 380 163 HOH HOH . 
U 5 HOH A 164 381 164 HOH HOH . 
U 5 HOH A 165 382 165 HOH HOH . 
U 5 HOH A 166 383 166 HOH HOH . 
U 5 HOH A 167 384 167 HOH HOH . 
U 5 HOH A 168 385 168 HOH HOH . 
U 5 HOH A 169 386 169 HOH HOH . 
U 5 HOH A 170 387 170 HOH HOH . 
U 5 HOH A 171 388 171 HOH HOH . 
U 5 HOH A 172 389 172 HOH HOH . 
U 5 HOH A 173 390 173 HOH HOH . 
U 5 HOH A 174 391 174 HOH HOH . 
U 5 HOH A 175 392 175 HOH HOH . 
U 5 HOH A 176 393 176 HOH HOH . 
U 5 HOH A 177 394 177 HOH HOH . 
U 5 HOH A 178 395 178 HOH HOH . 
U 5 HOH A 179 396 179 HOH HOH . 
U 5 HOH A 180 397 180 HOH HOH . 
U 5 HOH A 181 398 181 HOH HOH . 
U 5 HOH A 182 399 182 HOH HOH . 
U 5 HOH A 183 400 183 HOH HOH . 
U 5 HOH A 184 409 184 HOH HOH . 
U 5 HOH A 185 410 185 HOH HOH . 
U 5 HOH A 186 411 186 HOH HOH . 
U 5 HOH A 187 412 187 HOH HOH . 
U 5 HOH A 188 413 188 HOH HOH . 
U 5 HOH A 189 414 189 HOH HOH . 
U 5 HOH A 190 415 190 HOH HOH . 
U 5 HOH A 191 416 191 HOH HOH . 
U 5 HOH A 192 417 192 HOH HOH . 
U 5 HOH A 193 418 193 HOH HOH . 
U 5 HOH A 194 419 194 HOH HOH . 
U 5 HOH A 195 420 195 HOH HOH . 
U 5 HOH A 196 421 196 HOH HOH . 
U 5 HOH A 197 422 197 HOH HOH . 
U 5 HOH A 198 423 198 HOH HOH . 
U 5 HOH A 199 424 199 HOH HOH . 
U 5 HOH A 200 425 200 HOH HOH . 
U 5 HOH A 201 426 201 HOH HOH . 
U 5 HOH A 202 427 202 HOH HOH . 
U 5 HOH A 203 428 203 HOH HOH . 
U 5 HOH A 204 429 204 HOH HOH . 
U 5 HOH A 205 430 205 HOH HOH . 
U 5 HOH A 206 431 206 HOH HOH . 
U 5 HOH A 207 432 207 HOH HOH . 
U 5 HOH A 208 433 208 HOH HOH . 
U 5 HOH A 209 434 209 HOH HOH . 
U 5 HOH A 210 435 210 HOH HOH . 
U 5 HOH A 211 436 211 HOH HOH . 
U 5 HOH A 212 437 212 HOH HOH . 
U 5 HOH A 213 438 213 HOH HOH . 
U 5 HOH A 214 439 214 HOH HOH . 
U 5 HOH A 215 440 215 HOH HOH . 
U 5 HOH A 216 441 216 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . R 4 26.375 -25.427 8.111 1 63.27 ? C1 EDO 508 A 1 
HETATM 2 O O1 EDO . . . R 4 25.321 -26.215 7.552 1 63.9 ? O1 EDO 508 A 1 
HETATM 3 C C2 EDO . . . R 4 26.312 -25.514 9.631 1 63.29 ? C2 EDO 508 A 1 
HETATM 4 O O2 EDO . . . R 4 26.719 -24.257 10.181 1 63.28 ? O2 EDO 508 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#