data_3IQO # _model_server_result.job_id 6a759pjOjzE-4fStv6K8mQ _model_server_result.datetime_utc '2024-10-18 23:32:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":93}' # _entry.id 3IQO # _exptl.entry_id 3IQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.62 _cell.angle_gamma 90 _cell.entry_id 3IQO _cell.length_a 89.637 _cell.length_b 35.044 _cell.length_c 58.113 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1,2 B,E,F,H 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 2.656444 0 -58.052253 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 19 A SER 18 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc2 A O GLU 22 A GLU 21 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc3 A O ASP 24 A ASP 23 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc4 A O LYS 27 A LYS 26 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc5 A OE1 GLU 32 A GLU 31 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc6 A OE2 GLU 32 A GLU 31 1_555 C CA CA . A CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc7 A OD1 ASP 62 A ASP 61 1_555 D CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc8 A OD1 ASP 64 A ASP 63 1_555 D CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc9 A OD1 ASP 66 A ASP 65 1_555 D CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc10 A O GLU 68 A GLU 67 1_555 D CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc11 A OE1 GLU 73 A GLU 72 1_555 D CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc12 A OE2 GLU 73 A GLU 72 1_555 D CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc13 C CA CA . A CA 92 1_555 G O HOH . A HOH 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc14 D CA CA . A CA 93 1_555 G O HOH . A HOH 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc15 B O SER 19 B SER 18 1_555 E CA CA . B CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc16 B O GLU 22 B GLU 21 1_555 E CA CA . B CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc17 B O ASP 24 B ASP 23 1_555 E CA CA . B CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc18 B O LYS 27 B LYS 26 1_555 E CA CA . B CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc19 B OE1 GLU 32 B GLU 31 1_555 E CA CA . B CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc20 B OE2 GLU 32 B GLU 31 1_555 E CA CA . B CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc21 B OD1 ASP 62 B ASP 61 1_555 F CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc22 B OD1 ASP 64 B ASP 63 1_555 F CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc23 B OD1 ASP 66 B ASP 65 1_555 F CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc24 B O GLU 68 B GLU 67 1_555 F CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc25 B OE1 GLU 73 B GLU 72 1_555 F CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc26 B OE2 GLU 73 B GLU 72 1_555 F CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc27 E CA CA . B CA 92 1_555 H O HOH . B HOH 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc28 F CA CA . B CA 93 1_555 H O HOH . B HOH 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IQO _atom_sites.fract_transf_matrix[1][1] 0.011156 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000511 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 92 2 CA CA . D 2 CA A 1 93 4 CA CA . E 2 CA B 1 92 1 CA CA . F 2 CA B 1 93 3 CA CA . G 3 HOH A 1 94 94 HOH HOH . G 3 HOH A 2 95 95 HOH HOH . G 3 HOH A 3 96 6 HOH HOH . G 3 HOH A 4 97 97 HOH HOH . G 3 HOH A 5 98 98 HOH HOH . G 3 HOH A 6 99 9 HOH HOH . G 3 HOH A 7 100 11 HOH HOH . G 3 HOH A 8 101 13 HOH HOH . G 3 HOH A 9 102 102 HOH HOH . G 3 HOH A 10 103 103 HOH HOH . G 3 HOH A 11 104 104 HOH HOH . G 3 HOH A 12 105 18 HOH HOH . G 3 HOH A 13 106 19 HOH HOH . G 3 HOH A 14 107 21 HOH HOH . G 3 HOH A 15 108 108 HOH HOH . G 3 HOH A 16 109 22 HOH HOH . G 3 HOH A 17 110 110 HOH HOH . G 3 HOH A 18 111 111 HOH HOH . G 3 HOH A 19 112 23 HOH HOH . G 3 HOH A 20 113 32 HOH HOH . G 3 HOH A 21 114 33 HOH HOH . G 3 HOH A 22 115 34 HOH HOH . G 3 HOH A 23 116 37 HOH HOH . G 3 HOH A 24 117 39 HOH HOH . G 3 HOH A 25 118 42 HOH HOH . G 3 HOH A 26 119 46 HOH HOH . G 3 HOH A 27 120 48 HOH HOH . G 3 HOH A 28 121 121 HOH HOH . G 3 HOH A 29 122 122 HOH HOH . G 3 HOH A 30 123 49 HOH HOH . G 3 HOH A 31 124 124 HOH HOH . G 3 HOH A 32 125 125 HOH HOH . G 3 HOH A 33 126 126 HOH HOH . G 3 HOH A 34 127 50 HOH HOH . G 3 HOH A 35 128 128 HOH HOH . G 3 HOH A 36 129 53 HOH HOH . G 3 HOH A 37 130 54 HOH HOH . G 3 HOH A 38 131 55 HOH HOH . G 3 HOH A 39 132 61 HOH HOH . G 3 HOH A 40 133 133 HOH HOH . G 3 HOH A 41 134 134 HOH HOH . G 3 HOH A 42 135 62 HOH HOH . G 3 HOH A 43 136 64 HOH HOH . G 3 HOH A 44 137 137 HOH HOH . G 3 HOH A 45 138 65 HOH HOH . G 3 HOH A 46 139 66 HOH HOH . G 3 HOH A 47 140 147 HOH HOH . G 3 HOH A 48 141 141 HOH HOH . G 3 HOH A 49 142 142 HOH HOH . G 3 HOH A 50 143 143 HOH HOH . G 3 HOH A 51 144 67 HOH HOH . G 3 HOH A 52 145 145 HOH HOH . G 3 HOH A 53 146 68 HOH HOH . G 3 HOH A 54 147 70 HOH HOH . G 3 HOH A 55 148 71 HOH HOH . G 3 HOH A 56 149 72 HOH HOH . G 3 HOH A 57 150 73 HOH HOH . G 3 HOH A 58 151 74 HOH HOH . G 3 HOH A 59 152 77 HOH HOH . G 3 HOH A 60 153 81 HOH HOH . G 3 HOH A 61 154 83 HOH HOH . G 3 HOH A 62 155 85 HOH HOH . G 3 HOH A 63 156 2 HOH HOH . G 3 HOH A 64 157 3 HOH HOH . G 3 HOH A 65 158 90 HOH HOH . G 3 HOH A 66 159 5 HOH HOH . H 3 HOH B 1 94 1 HOH HOH . H 3 HOH B 2 95 4 HOH HOH . H 3 HOH B 3 96 96 HOH HOH . H 3 HOH B 4 97 7 HOH HOH . H 3 HOH B 5 98 8 HOH HOH . H 3 HOH B 6 99 99 HOH HOH . H 3 HOH B 7 100 100 HOH HOH . H 3 HOH B 8 101 101 HOH HOH . H 3 HOH B 9 102 10 HOH HOH . H 3 HOH B 10 103 12 HOH HOH . H 3 HOH B 11 104 14 HOH HOH . H 3 HOH B 12 105 15 HOH HOH . H 3 HOH B 13 106 106 HOH HOH . H 3 HOH B 14 107 107 HOH HOH . H 3 HOH B 15 108 16 HOH HOH . H 3 HOH B 16 109 17 HOH HOH . H 3 HOH B 17 110 20 HOH HOH . H 3 HOH B 18 111 24 HOH HOH . H 3 HOH B 19 112 112 HOH HOH . H 3 HOH B 20 113 113 HOH HOH . H 3 HOH B 21 114 114 HOH HOH . H 3 HOH B 22 115 115 HOH HOH . H 3 HOH B 23 116 116 HOH HOH . H 3 HOH B 24 117 117 HOH HOH . H 3 HOH B 25 118 118 HOH HOH . H 3 HOH B 26 119 25 HOH HOH . H 3 HOH B 27 120 120 HOH HOH . H 3 HOH B 28 121 26 HOH HOH . H 3 HOH B 29 122 27 HOH HOH . H 3 HOH B 30 123 123 HOH HOH . H 3 HOH B 31 124 28 HOH HOH . H 3 HOH B 32 125 29 HOH HOH . H 3 HOH B 33 126 30 HOH HOH . H 3 HOH B 34 127 127 HOH HOH . H 3 HOH B 35 128 31 HOH HOH . H 3 HOH B 36 129 129 HOH HOH . H 3 HOH B 37 130 130 HOH HOH . H 3 HOH B 38 131 131 HOH HOH . H 3 HOH B 39 132 132 HOH HOH . H 3 HOH B 40 133 35 HOH HOH . H 3 HOH B 41 134 36 HOH HOH . H 3 HOH B 42 135 135 HOH HOH . H 3 HOH B 43 136 136 HOH HOH . H 3 HOH B 44 137 38 HOH HOH . H 3 HOH B 45 138 138 HOH HOH . H 3 HOH B 46 139 139 HOH HOH . H 3 HOH B 47 140 140 HOH HOH . H 3 HOH B 48 141 41 HOH HOH . H 3 HOH B 49 142 43 HOH HOH . H 3 HOH B 50 143 44 HOH HOH . H 3 HOH B 51 144 144 HOH HOH . H 3 HOH B 52 145 45 HOH HOH . H 3 HOH B 53 146 146 HOH HOH . H 3 HOH B 54 147 40 HOH HOH . H 3 HOH B 55 148 148 HOH HOH . H 3 HOH B 56 149 47 HOH HOH . H 3 HOH B 57 150 51 HOH HOH . H 3 HOH B 58 151 52 HOH HOH . H 3 HOH B 59 152 56 HOH HOH . H 3 HOH B 60 153 57 HOH HOH . H 3 HOH B 61 154 58 HOH HOH . H 3 HOH B 62 155 59 HOH HOH . H 3 HOH B 63 156 88 HOH HOH . H 3 HOH B 64 157 89 HOH HOH . H 3 HOH B 65 158 76 HOH HOH . H 3 HOH B 66 159 78 HOH HOH . H 3 HOH B 67 160 79 HOH HOH . H 3 HOH B 68 161 80 HOH HOH . H 3 HOH B 69 162 82 HOH HOH . H 3 HOH B 70 163 84 HOH HOH . H 3 HOH B 71 164 86 HOH HOH . H 3 HOH B 72 165 87 HOH HOH . H 3 HOH B 73 166 60 HOH HOH . H 3 HOH B 74 167 69 HOH HOH . H 3 HOH B 75 168 91 HOH HOH . H 3 HOH B 76 169 92 HOH HOH . H 3 HOH B 77 170 93 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -11.215 _atom_site.Cartn_y -17.897 _atom_site.Cartn_z -22.434 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 93 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #