data_3IQZ # _model_server_result.job_id s52s00L0nfYvR8VcbZIk7Q _model_server_result.datetime_utc '2024-11-26 17:57:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iqz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":285}' # _entry.id 3IQZ # _exptl.entry_id 3IQZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.25 _cell.angle_gamma 90 _cell.entry_id 3IQZ _cell.length_a 62.81 _cell.length_b 167.7 _cell.length_c 95.86 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IQZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 O N N ? 5 Q N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IQZ _atom_sites.fract_transf_matrix[1][1] 0.015921 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003167 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010636 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 H4M A 1 284 1 H4M H4M . H 2 H4M B 1 284 2 H4M H4M . I 3 CA B 1 285 1 CA CA . J 4 GOL B 1 286 1 GOL GOL . K 2 H4M C 1 284 3 H4M H4M . L 2 H4M D 1 284 4 H4M H4M . M 5 NA D 1 285 1 NA NA . N 2 H4M E 1 284 5 H4M H4M . O 5 NA E 1 285 4 NA NA . P 2 H4M F 1 284 6 H4M H4M . Q 5 NA F 1 285 2 NA NA . R 6 HOH A 1 285 285 HOH HOH . R 6 HOH A 2 286 286 HOH HOH . R 6 HOH A 3 287 10 HOH HOH . R 6 HOH A 4 288 14 HOH HOH . R 6 HOH A 5 289 31 HOH HOH . R 6 HOH A 6 290 45 HOH HOH . R 6 HOH A 7 291 291 HOH HOH . R 6 HOH A 8 292 49 HOH HOH . R 6 HOH A 9 293 293 HOH HOH . R 6 HOH A 10 294 54 HOH HOH . R 6 HOH A 11 295 295 HOH HOH . R 6 HOH A 12 296 70 HOH HOH . R 6 HOH A 13 297 73 HOH HOH . R 6 HOH A 14 298 87 HOH HOH . R 6 HOH A 15 299 97 HOH HOH . R 6 HOH A 16 300 120 HOH HOH . R 6 HOH A 17 301 123 HOH HOH . R 6 HOH A 18 302 131 HOH HOH . R 6 HOH A 19 303 146 HOH HOH . R 6 HOH A 20 304 152 HOH HOH . R 6 HOH A 21 305 189 HOH HOH . R 6 HOH A 22 306 190 HOH HOH . R 6 HOH A 23 307 212 HOH HOH . R 6 HOH A 24 308 213 HOH HOH . R 6 HOH A 25 309 214 HOH HOH . R 6 HOH A 26 310 215 HOH HOH . R 6 HOH A 27 311 216 HOH HOH . R 6 HOH A 28 312 217 HOH HOH . R 6 HOH A 29 313 272 HOH HOH . S 6 HOH B 1 287 4 HOH HOH . S 6 HOH B 2 288 9 HOH HOH . S 6 HOH B 3 289 11 HOH HOH . S 6 HOH B 4 290 290 HOH HOH . S 6 HOH B 5 291 17 HOH HOH . S 6 HOH B 6 292 18 HOH HOH . S 6 HOH B 7 293 23 HOH HOH . S 6 HOH B 8 294 27 HOH HOH . S 6 HOH B 9 295 29 HOH HOH . S 6 HOH B 10 296 30 HOH HOH . S 6 HOH B 11 297 32 HOH HOH . S 6 HOH B 12 298 298 HOH HOH . S 6 HOH B 13 299 299 HOH HOH . S 6 HOH B 14 300 35 HOH HOH . S 6 HOH B 15 301 37 HOH HOH . S 6 HOH B 16 302 39 HOH HOH . S 6 HOH B 17 303 40 HOH HOH . S 6 HOH B 18 304 43 HOH HOH . S 6 HOH B 19 305 50 HOH HOH . S 6 HOH B 20 306 53 HOH HOH . S 6 HOH B 21 307 60 HOH HOH . S 6 HOH B 22 308 64 HOH HOH . S 6 HOH B 23 309 72 HOH HOH . S 6 HOH B 24 310 75 HOH HOH . S 6 HOH B 25 311 85 HOH HOH . S 6 HOH B 26 312 91 HOH HOH . S 6 HOH B 27 313 98 HOH HOH . S 6 HOH B 28 314 100 HOH HOH . S 6 HOH B 29 315 101 HOH HOH . S 6 HOH B 30 316 108 HOH HOH . S 6 HOH B 31 317 110 HOH HOH . S 6 HOH B 32 318 111 HOH HOH . S 6 HOH B 33 319 113 HOH HOH . S 6 HOH B 34 320 128 HOH HOH . S 6 HOH B 35 321 133 HOH HOH . S 6 HOH B 36 322 135 HOH HOH . S 6 HOH B 37 323 136 HOH HOH . S 6 HOH B 38 324 140 HOH HOH . S 6 HOH B 39 325 142 HOH HOH . S 6 HOH B 40 326 145 HOH HOH . S 6 HOH B 41 327 154 HOH HOH . S 6 HOH B 42 328 155 HOH HOH . S 6 HOH B 43 329 160 HOH HOH . S 6 HOH B 44 330 168 HOH HOH . S 6 HOH B 45 331 169 HOH HOH . S 6 HOH B 46 332 171 HOH HOH . S 6 HOH B 47 333 174 HOH HOH . S 6 HOH B 48 334 177 HOH HOH . S 6 HOH B 49 335 178 HOH HOH . S 6 HOH B 50 336 180 HOH HOH . S 6 HOH B 51 337 191 HOH HOH . S 6 HOH B 52 338 196 HOH HOH . S 6 HOH B 53 339 197 HOH HOH . S 6 HOH B 54 340 198 HOH HOH . S 6 HOH B 55 341 201 HOH HOH . S 6 HOH B 56 342 202 HOH HOH . S 6 HOH B 57 343 204 HOH HOH . S 6 HOH B 58 344 208 HOH HOH . S 6 HOH B 59 345 211 HOH HOH . S 6 HOH B 60 346 218 HOH HOH . S 6 HOH B 61 347 219 HOH HOH . S 6 HOH B 62 348 220 HOH HOH . S 6 HOH B 63 349 221 HOH HOH . S 6 HOH B 64 350 223 HOH HOH . S 6 HOH B 65 351 224 HOH HOH . S 6 HOH B 66 352 225 HOH HOH . S 6 HOH B 67 353 227 HOH HOH . S 6 HOH B 68 354 228 HOH HOH . S 6 HOH B 69 355 229 HOH HOH . S 6 HOH B 70 356 230 HOH HOH . S 6 HOH B 71 357 231 HOH HOH . S 6 HOH B 72 358 232 HOH HOH . S 6 HOH B 73 359 233 HOH HOH . S 6 HOH B 74 360 234 HOH HOH . S 6 HOH B 75 361 261 HOH HOH . S 6 HOH B 76 362 271 HOH HOH . S 6 HOH B 77 363 273 HOH HOH . S 6 HOH B 78 364 279 HOH HOH . S 6 HOH B 79 365 282 HOH HOH . T 6 HOH C 1 285 2 HOH HOH . T 6 HOH C 2 286 12 HOH HOH . T 6 HOH C 3 287 287 HOH HOH . T 6 HOH C 4 288 15 HOH HOH . T 6 HOH C 5 289 19 HOH HOH . T 6 HOH C 6 290 28 HOH HOH . T 6 HOH C 7 291 36 HOH HOH . T 6 HOH C 8 292 41 HOH HOH . T 6 HOH C 9 293 44 HOH HOH . T 6 HOH C 10 294 294 HOH HOH . T 6 HOH C 11 295 56 HOH HOH . T 6 HOH C 12 296 61 HOH HOH . T 6 HOH C 13 297 62 HOH HOH . T 6 HOH C 14 298 63 HOH HOH . T 6 HOH C 15 299 67 HOH HOH . T 6 HOH C 16 300 81 HOH HOH . T 6 HOH C 17 301 301 HOH HOH . T 6 HOH C 18 302 86 HOH HOH . T 6 HOH C 19 303 88 HOH HOH . T 6 HOH C 20 304 99 HOH HOH . T 6 HOH C 21 305 109 HOH HOH . T 6 HOH C 22 306 112 HOH HOH . T 6 HOH C 23 307 115 HOH HOH . T 6 HOH C 24 308 117 HOH HOH . T 6 HOH C 25 309 122 HOH HOH . T 6 HOH C 26 310 132 HOH HOH . T 6 HOH C 27 311 134 HOH HOH . T 6 HOH C 28 312 137 HOH HOH . T 6 HOH C 29 313 150 HOH HOH . T 6 HOH C 30 314 151 HOH HOH . T 6 HOH C 31 315 153 HOH HOH . T 6 HOH C 32 316 157 HOH HOH . T 6 HOH C 33 317 158 HOH HOH . T 6 HOH C 34 318 164 HOH HOH . T 6 HOH C 35 319 166 HOH HOH . T 6 HOH C 36 320 167 HOH HOH . T 6 HOH C 37 321 172 HOH HOH . T 6 HOH C 38 322 176 HOH HOH . T 6 HOH C 39 323 182 HOH HOH . T 6 HOH C 40 324 184 HOH HOH . T 6 HOH C 41 325 188 HOH HOH . T 6 HOH C 42 326 193 HOH HOH . T 6 HOH C 43 327 195 HOH HOH . T 6 HOH C 44 328 235 HOH HOH . T 6 HOH C 45 329 236 HOH HOH . T 6 HOH C 46 330 237 HOH HOH . T 6 HOH C 47 331 238 HOH HOH . T 6 HOH C 48 332 239 HOH HOH . T 6 HOH C 49 333 240 HOH HOH . T 6 HOH C 50 334 241 HOH HOH . T 6 HOH C 51 335 248 HOH HOH . T 6 HOH C 52 336 249 HOH HOH . T 6 HOH C 53 337 258 HOH HOH . T 6 HOH C 54 338 274 HOH HOH . T 6 HOH C 55 339 280 HOH HOH . T 6 HOH C 56 340 284 HOH HOH . U 6 HOH D 1 286 3 HOH HOH . U 6 HOH D 2 287 5 HOH HOH . U 6 HOH D 3 288 288 HOH HOH . U 6 HOH D 4 289 289 HOH HOH . U 6 HOH D 5 290 13 HOH HOH . U 6 HOH D 6 291 33 HOH HOH . U 6 HOH D 7 292 34 HOH HOH . U 6 HOH D 8 293 84 HOH HOH . U 6 HOH D 9 294 92 HOH HOH . U 6 HOH D 10 295 93 HOH HOH . U 6 HOH D 11 296 124 HOH HOH . U 6 HOH D 12 297 143 HOH HOH . U 6 HOH D 13 298 173 HOH HOH . U 6 HOH D 14 299 205 HOH HOH . U 6 HOH D 15 300 242 HOH HOH . U 6 HOH D 16 301 243 HOH HOH . U 6 HOH D 17 302 245 HOH HOH . U 6 HOH D 18 303 281 HOH HOH . V 6 HOH E 1 286 16 HOH HOH . V 6 HOH E 2 287 20 HOH HOH . V 6 HOH E 3 288 38 HOH HOH . V 6 HOH E 4 289 47 HOH HOH . V 6 HOH E 5 290 55 HOH HOH . V 6 HOH E 6 291 69 HOH HOH . V 6 HOH E 7 292 71 HOH HOH . V 6 HOH E 8 293 77 HOH HOH . V 6 HOH E 9 294 80 HOH HOH . V 6 HOH E 10 295 83 HOH HOH . V 6 HOH E 11 296 296 HOH HOH . V 6 HOH E 12 297 297 HOH HOH . V 6 HOH E 13 298 95 HOH HOH . V 6 HOH E 14 299 96 HOH HOH . V 6 HOH E 15 300 105 HOH HOH . V 6 HOH E 16 301 107 HOH HOH . V 6 HOH E 17 302 114 HOH HOH . V 6 HOH E 18 303 116 HOH HOH . V 6 HOH E 19 304 127 HOH HOH . V 6 HOH E 20 305 138 HOH HOH . V 6 HOH E 21 306 149 HOH HOH . V 6 HOH E 22 307 161 HOH HOH . V 6 HOH E 23 308 162 HOH HOH . V 6 HOH E 24 309 165 HOH HOH . V 6 HOH E 25 310 175 HOH HOH . V 6 HOH E 26 311 206 HOH HOH . V 6 HOH E 27 312 226 HOH HOH . V 6 HOH E 28 313 247 HOH HOH . V 6 HOH E 29 314 250 HOH HOH . V 6 HOH E 30 315 251 HOH HOH . V 6 HOH E 31 316 252 HOH HOH . V 6 HOH E 32 317 253 HOH HOH . V 6 HOH E 33 318 254 HOH HOH . V 6 HOH E 34 319 255 HOH HOH . V 6 HOH E 35 320 256 HOH HOH . V 6 HOH E 36 321 257 HOH HOH . V 6 HOH E 37 322 259 HOH HOH . V 6 HOH E 38 323 260 HOH HOH . V 6 HOH E 39 324 267 HOH HOH . V 6 HOH E 40 325 275 HOH HOH . V 6 HOH E 41 326 276 HOH HOH . V 6 HOH E 42 327 278 HOH HOH . W 6 HOH F 1 286 1 HOH HOH . W 6 HOH F 2 287 6 HOH HOH . W 6 HOH F 3 288 21 HOH HOH . W 6 HOH F 4 289 22 HOH HOH . W 6 HOH F 5 290 25 HOH HOH . W 6 HOH F 6 291 26 HOH HOH . W 6 HOH F 7 292 292 HOH HOH . W 6 HOH F 8 293 42 HOH HOH . W 6 HOH F 9 294 57 HOH HOH . W 6 HOH F 10 295 65 HOH HOH . W 6 HOH F 11 296 68 HOH HOH . W 6 HOH F 12 297 78 HOH HOH . W 6 HOH F 13 298 82 HOH HOH . W 6 HOH F 14 299 89 HOH HOH . W 6 HOH F 15 300 300 HOH HOH . W 6 HOH F 16 301 90 HOH HOH . W 6 HOH F 17 302 94 HOH HOH . W 6 HOH F 18 303 102 HOH HOH . W 6 HOH F 19 304 103 HOH HOH . W 6 HOH F 20 305 119 HOH HOH . W 6 HOH F 21 306 125 HOH HOH . W 6 HOH F 22 307 126 HOH HOH . W 6 HOH F 23 308 141 HOH HOH . W 6 HOH F 24 309 144 HOH HOH . W 6 HOH F 25 310 148 HOH HOH . W 6 HOH F 26 311 156 HOH HOH . W 6 HOH F 27 312 181 HOH HOH . W 6 HOH F 28 313 183 HOH HOH . W 6 HOH F 29 314 185 HOH HOH . W 6 HOH F 30 315 187 HOH HOH . W 6 HOH F 31 316 192 HOH HOH . W 6 HOH F 32 317 194 HOH HOH . W 6 HOH F 33 318 199 HOH HOH . W 6 HOH F 34 319 200 HOH HOH . W 6 HOH F 35 320 203 HOH HOH . W 6 HOH F 36 321 207 HOH HOH . W 6 HOH F 37 322 209 HOH HOH . W 6 HOH F 38 323 210 HOH HOH . W 6 HOH F 39 324 222 HOH HOH . W 6 HOH F 40 325 262 HOH HOH . W 6 HOH F 41 326 263 HOH HOH . W 6 HOH F 42 327 264 HOH HOH . W 6 HOH F 43 328 265 HOH HOH . W 6 HOH F 44 329 266 HOH HOH . W 6 HOH F 45 330 268 HOH HOH . W 6 HOH F 46 331 269 HOH HOH . W 6 HOH F 47 332 270 HOH HOH . W 6 HOH F 48 333 277 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 5 _atom_site.Cartn_x -26.642 _atom_site.Cartn_y 0.767 _atom_site.Cartn_z -5.575 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 285 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #