data_3IRB # _model_server_result.job_id MdluLcTuzMEUgEBtDNO6oQ _model_server_result.datetime_utc '2025-02-05 14:58:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3irb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":207}' # _entry.id 3IRB # _exptl.entry_id 3IRB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IRB _cell.length_a 75.17 _cell.length_b 75.17 _cell.length_c 115.4 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IRB _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N 3 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N 4 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_565 x,-y+1,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 75.17 57.7 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 19 A VAL 18 1_555 A N MSE 20 A MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 20 A MSE 19 1_555 A N GLU 21 A GLU 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 B C VAL 19 B VAL 18 1_555 B N MSE 20 B MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 B C MSE 20 B MSE 19 1_555 B N GLU 21 B GLU 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A SG CYS 50 A CYS 49 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc2 A SG CYS 53 A CYS 52 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc3 A SG CYS 64 A CYS 63 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc4 A SG CYS 67 A CYS 66 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 B SG CYS 50 B CYS 49 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc6 B SG CYS 53 B CYS 52 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc7 B SG CYS 64 B CYS 63 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc8 B SG CYS 67 B CYS 66 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 297 n n S O2 SO4 doub 298 n n S O3 SO4 sing 299 n n S O4 SO4 sing 300 n n # _atom_sites.entry_id 3IRB _atom_sites.fract_transf_matrix[1][1] 0.013303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013303 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 201 ZN ZN . D 3 SO4 A 1 204 204 SO4 SO4 . E 3 SO4 A 1 205 205 SO4 SO4 . F 3 SO4 A 1 208 208 SO4 SO4 . G 3 SO4 A 1 209 209 SO4 SO4 . H 2 ZN B 1 201 201 ZN ZN . I 4 ACY B 1 202 202 ACY ACY . J 4 ACY B 1 203 203 ACY ACY . K 3 SO4 B 1 206 206 SO4 SO4 . L 3 SO4 B 1 207 207 SO4 SO4 . M 5 HOH A 1 214 214 HOH HOH . M 5 HOH A 2 216 216 HOH HOH . M 5 HOH A 3 218 218 HOH HOH . M 5 HOH A 4 219 219 HOH HOH . M 5 HOH A 5 224 224 HOH HOH . M 5 HOH A 6 225 225 HOH HOH . M 5 HOH A 7 227 227 HOH HOH . M 5 HOH A 8 228 228 HOH HOH . M 5 HOH A 9 230 230 HOH HOH . M 5 HOH A 10 231 231 HOH HOH . M 5 HOH A 11 232 232 HOH HOH . M 5 HOH A 12 233 233 HOH HOH . M 5 HOH A 13 234 234 HOH HOH . M 5 HOH A 14 235 235 HOH HOH . M 5 HOH A 15 238 238 HOH HOH . M 5 HOH A 16 241 241 HOH HOH . M 5 HOH A 17 243 243 HOH HOH . M 5 HOH A 18 245 245 HOH HOH . M 5 HOH A 19 246 246 HOH HOH . M 5 HOH A 20 251 251 HOH HOH . M 5 HOH A 21 253 253 HOH HOH . M 5 HOH A 22 256 256 HOH HOH . M 5 HOH A 23 258 258 HOH HOH . M 5 HOH A 24 260 260 HOH HOH . M 5 HOH A 25 261 261 HOH HOH . M 5 HOH A 26 262 262 HOH HOH . M 5 HOH A 27 267 267 HOH HOH . M 5 HOH A 28 269 269 HOH HOH . M 5 HOH A 29 272 272 HOH HOH . M 5 HOH A 30 276 276 HOH HOH . M 5 HOH A 31 277 277 HOH HOH . M 5 HOH A 32 278 278 HOH HOH . M 5 HOH A 33 289 289 HOH HOH . M 5 HOH A 34 292 292 HOH HOH . M 5 HOH A 35 293 293 HOH HOH . M 5 HOH A 36 295 295 HOH HOH . M 5 HOH A 37 299 299 HOH HOH . M 5 HOH A 38 301 301 HOH HOH . M 5 HOH A 39 304 304 HOH HOH . M 5 HOH A 40 307 307 HOH HOH . M 5 HOH A 41 308 308 HOH HOH . M 5 HOH A 42 311 311 HOH HOH . M 5 HOH A 43 312 312 HOH HOH . M 5 HOH A 44 314 314 HOH HOH . M 5 HOH A 45 316 316 HOH HOH . M 5 HOH A 46 318 318 HOH HOH . M 5 HOH A 47 320 320 HOH HOH . M 5 HOH A 48 325 325 HOH HOH . M 5 HOH A 49 326 326 HOH HOH . M 5 HOH A 50 327 327 HOH HOH . M 5 HOH A 51 328 328 HOH HOH . M 5 HOH A 52 329 329 HOH HOH . M 5 HOH A 53 330 330 HOH HOH . M 5 HOH A 54 331 331 HOH HOH . M 5 HOH A 55 336 336 HOH HOH . M 5 HOH A 56 339 339 HOH HOH . M 5 HOH A 57 340 340 HOH HOH . M 5 HOH A 58 342 342 HOH HOH . M 5 HOH A 59 344 344 HOH HOH . M 5 HOH A 60 347 347 HOH HOH . M 5 HOH A 61 349 349 HOH HOH . M 5 HOH A 62 350 350 HOH HOH . M 5 HOH A 63 351 351 HOH HOH . M 5 HOH A 64 352 352 HOH HOH . M 5 HOH A 65 353 353 HOH HOH . M 5 HOH A 66 354 354 HOH HOH . M 5 HOH A 67 355 355 HOH HOH . M 5 HOH A 68 356 356 HOH HOH . M 5 HOH A 69 357 357 HOH HOH . M 5 HOH A 70 358 358 HOH HOH . M 5 HOH A 71 359 359 HOH HOH . M 5 HOH A 72 364 364 HOH HOH . M 5 HOH A 73 366 366 HOH HOH . M 5 HOH A 74 368 368 HOH HOH . M 5 HOH A 75 369 369 HOH HOH . M 5 HOH A 76 371 371 HOH HOH . M 5 HOH A 77 372 372 HOH HOH . M 5 HOH A 78 375 375 HOH HOH . M 5 HOH A 79 377 377 HOH HOH . M 5 HOH A 80 380 380 HOH HOH . M 5 HOH A 81 382 382 HOH HOH . M 5 HOH A 82 383 383 HOH HOH . M 5 HOH A 83 384 384 HOH HOH . M 5 HOH A 84 387 387 HOH HOH . M 5 HOH A 85 390 390 HOH HOH . M 5 HOH A 86 393 393 HOH HOH . M 5 HOH A 87 395 395 HOH HOH . M 5 HOH A 88 403 403 HOH HOH . M 5 HOH A 89 404 404 HOH HOH . M 5 HOH A 90 406 406 HOH HOH . M 5 HOH A 91 408 408 HOH HOH . N 5 HOH B 1 210 210 HOH HOH . N 5 HOH B 2 211 211 HOH HOH . N 5 HOH B 3 212 212 HOH HOH . N 5 HOH B 4 213 213 HOH HOH . N 5 HOH B 5 215 215 HOH HOH . N 5 HOH B 6 217 217 HOH HOH . N 5 HOH B 7 220 220 HOH HOH . N 5 HOH B 8 221 221 HOH HOH . N 5 HOH B 9 222 222 HOH HOH . N 5 HOH B 10 223 223 HOH HOH . N 5 HOH B 11 226 226 HOH HOH . N 5 HOH B 12 229 229 HOH HOH . N 5 HOH B 13 236 236 HOH HOH . N 5 HOH B 14 237 237 HOH HOH . N 5 HOH B 15 239 239 HOH HOH . N 5 HOH B 16 240 240 HOH HOH . N 5 HOH B 17 242 242 HOH HOH . N 5 HOH B 18 244 244 HOH HOH . N 5 HOH B 19 247 247 HOH HOH . N 5 HOH B 20 248 248 HOH HOH . N 5 HOH B 21 249 249 HOH HOH . N 5 HOH B 22 250 250 HOH HOH . N 5 HOH B 23 252 252 HOH HOH . N 5 HOH B 24 254 254 HOH HOH . N 5 HOH B 25 255 255 HOH HOH . N 5 HOH B 26 257 257 HOH HOH . N 5 HOH B 27 259 259 HOH HOH . N 5 HOH B 28 263 263 HOH HOH . N 5 HOH B 29 264 264 HOH HOH . N 5 HOH B 30 265 265 HOH HOH . N 5 HOH B 31 266 266 HOH HOH . N 5 HOH B 32 268 268 HOH HOH . N 5 HOH B 33 270 270 HOH HOH . N 5 HOH B 34 271 271 HOH HOH . N 5 HOH B 35 273 273 HOH HOH . N 5 HOH B 36 274 274 HOH HOH . N 5 HOH B 37 275 275 HOH HOH . N 5 HOH B 38 279 279 HOH HOH . N 5 HOH B 39 280 280 HOH HOH . N 5 HOH B 40 281 281 HOH HOH . N 5 HOH B 41 282 282 HOH HOH . N 5 HOH B 42 283 283 HOH HOH . N 5 HOH B 43 284 284 HOH HOH . N 5 HOH B 44 285 285 HOH HOH . N 5 HOH B 45 286 286 HOH HOH . N 5 HOH B 46 287 287 HOH HOH . N 5 HOH B 47 288 288 HOH HOH . N 5 HOH B 48 290 290 HOH HOH . N 5 HOH B 49 291 291 HOH HOH . N 5 HOH B 50 294 294 HOH HOH . N 5 HOH B 51 296 296 HOH HOH . N 5 HOH B 52 297 297 HOH HOH . N 5 HOH B 53 298 298 HOH HOH . N 5 HOH B 54 300 300 HOH HOH . N 5 HOH B 55 302 302 HOH HOH . N 5 HOH B 56 303 303 HOH HOH . N 5 HOH B 57 305 305 HOH HOH . N 5 HOH B 58 306 306 HOH HOH . N 5 HOH B 59 309 309 HOH HOH . N 5 HOH B 60 310 310 HOH HOH . N 5 HOH B 61 313 313 HOH HOH . N 5 HOH B 62 315 315 HOH HOH . N 5 HOH B 63 317 317 HOH HOH . N 5 HOH B 64 319 319 HOH HOH . N 5 HOH B 65 321 321 HOH HOH . N 5 HOH B 66 322 322 HOH HOH . N 5 HOH B 67 323 323 HOH HOH . N 5 HOH B 68 324 324 HOH HOH . N 5 HOH B 69 332 332 HOH HOH . N 5 HOH B 70 333 333 HOH HOH . N 5 HOH B 71 334 334 HOH HOH . N 5 HOH B 72 335 335 HOH HOH . N 5 HOH B 73 337 337 HOH HOH . N 5 HOH B 74 338 338 HOH HOH . N 5 HOH B 75 341 341 HOH HOH . N 5 HOH B 76 343 343 HOH HOH . N 5 HOH B 77 345 345 HOH HOH . N 5 HOH B 78 346 346 HOH HOH . N 5 HOH B 79 348 348 HOH HOH . N 5 HOH B 80 360 360 HOH HOH . N 5 HOH B 81 361 361 HOH HOH . N 5 HOH B 82 362 362 HOH HOH . N 5 HOH B 83 363 363 HOH HOH . N 5 HOH B 84 365 365 HOH HOH . N 5 HOH B 85 367 367 HOH HOH . N 5 HOH B 86 370 370 HOH HOH . N 5 HOH B 87 373 373 HOH HOH . N 5 HOH B 88 374 374 HOH HOH . N 5 HOH B 89 376 376 HOH HOH . N 5 HOH B 90 378 378 HOH HOH . N 5 HOH B 91 379 379 HOH HOH . N 5 HOH B 92 381 381 HOH HOH . N 5 HOH B 93 385 385 HOH HOH . N 5 HOH B 94 386 386 HOH HOH . N 5 HOH B 95 388 388 HOH HOH . N 5 HOH B 96 389 389 HOH HOH . N 5 HOH B 97 391 391 HOH HOH . N 5 HOH B 98 392 392 HOH HOH . N 5 HOH B 99 394 394 HOH HOH . N 5 HOH B 100 396 396 HOH HOH . N 5 HOH B 101 397 397 HOH HOH . N 5 HOH B 102 398 398 HOH HOH . N 5 HOH B 103 399 399 HOH HOH . N 5 HOH B 104 400 400 HOH HOH . N 5 HOH B 105 401 401 HOH HOH . N 5 HOH B 106 402 402 HOH HOH . N 5 HOH B 107 405 405 HOH HOH . N 5 HOH B 108 407 407 HOH HOH . N 5 HOH B 109 409 409 HOH HOH . N 5 HOH B 110 410 410 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . L 3 14.628 10.565 28.659 0.6 45.07 ? S SO4 207 B 1 HETATM 2 O O1 SO4 . . . L 3 13.283 11.027 28.835 0.6 26.59 ? O1 SO4 207 B 1 HETATM 3 O O2 SO4 . . . L 3 15.252 10.331 29.954 0.6 47.02 ? O2 SO4 207 B 1 HETATM 4 O O3 SO4 . . . L 3 15.339 11.606 27.923 0.6 44.22 ? O3 SO4 207 B 1 HETATM 5 O O4 SO4 . . . L 3 14.592 9.3 27.918 0.6 38.69 ? O4 SO4 207 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #