data_3ITP # _model_server_result.job_id t8qCPFJQRtXlFXxAAY8u1Q _model_server_result.datetime_utc '2024-10-11 10:20:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3itp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":151}' # _entry.id 3ITP # _exptl.entry_id 3ITP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.26 _cell.angle_gamma 90 _cell.entry_id 3ITP _cell.length_a 31.027 _cell.length_b 60.296 _cell.length_c 38.249 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ITP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 21 A ASP 21 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc2 A OD1 ASP 40 A ASP 40 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc4 A OE2 GLU 43 A GLU 43 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc5 B O4P THP . A THP 150 1_555 C CA CA . A CA 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.076 ? metalc ? metalc6 C CA CA . A CA 151 1_555 D O HOH . A HOH 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc7 C CA CA . A CA 151 1_555 D O HOH . A HOH 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ITP _atom_sites.fract_transf_matrix[1][1] 0.03223 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001271 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016585 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 THP A 1 150 1 THP THP . C 3 CA A 1 151 1 CA CA . D 4 HOH A 1 44 44 HOH HOH . D 4 HOH A 2 45 45 HOH HOH . D 4 HOH A 3 46 46 HOH HOH . D 4 HOH A 4 47 47 HOH HOH . D 4 HOH A 5 48 48 HOH HOH . D 4 HOH A 6 49 49 HOH HOH . D 4 HOH A 7 152 2 HOH HOH . D 4 HOH A 8 153 3 HOH HOH . D 4 HOH A 9 154 4 HOH HOH . D 4 HOH A 10 155 5 HOH HOH . D 4 HOH A 11 156 6 HOH HOH . D 4 HOH A 12 157 7 HOH HOH . D 4 HOH A 13 158 8 HOH HOH . D 4 HOH A 14 159 10 HOH HOH . D 4 HOH A 15 160 11 HOH HOH . D 4 HOH A 16 161 12 HOH HOH . D 4 HOH A 17 162 13 HOH HOH . D 4 HOH A 18 163 14 HOH HOH . D 4 HOH A 19 164 15 HOH HOH . D 4 HOH A 20 165 16 HOH HOH . D 4 HOH A 21 166 17 HOH HOH . D 4 HOH A 22 167 18 HOH HOH . D 4 HOH A 23 168 19 HOH HOH . D 4 HOH A 24 169 20 HOH HOH . D 4 HOH A 25 170 21 HOH HOH . D 4 HOH A 26 171 22 HOH HOH . D 4 HOH A 27 172 23 HOH HOH . D 4 HOH A 28 173 24 HOH HOH . D 4 HOH A 29 174 25 HOH HOH . D 4 HOH A 30 175 26 HOH HOH . D 4 HOH A 31 176 27 HOH HOH . D 4 HOH A 32 177 28 HOH HOH . D 4 HOH A 33 178 29 HOH HOH . D 4 HOH A 34 179 30 HOH HOH . D 4 HOH A 35 180 31 HOH HOH . D 4 HOH A 36 181 32 HOH HOH . D 4 HOH A 37 182 33 HOH HOH . D 4 HOH A 38 183 34 HOH HOH . D 4 HOH A 39 184 35 HOH HOH . D 4 HOH A 40 185 36 HOH HOH . D 4 HOH A 41 186 37 HOH HOH . D 4 HOH A 42 187 38 HOH HOH . D 4 HOH A 43 188 39 HOH HOH . D 4 HOH A 44 189 40 HOH HOH . D 4 HOH A 45 190 41 HOH HOH . D 4 HOH A 46 191 42 HOH HOH . D 4 HOH A 47 192 43 HOH HOH . D 4 HOH A 48 193 50 HOH HOH . D 4 HOH A 49 194 51 HOH HOH . D 4 HOH A 50 195 52 HOH HOH . D 4 HOH A 51 196 53 HOH HOH . D 4 HOH A 52 197 54 HOH HOH . D 4 HOH A 53 198 55 HOH HOH . D 4 HOH A 54 199 56 HOH HOH . D 4 HOH A 55 200 57 HOH HOH . D 4 HOH A 56 201 58 HOH HOH . D 4 HOH A 57 202 59 HOH HOH . D 4 HOH A 58 203 60 HOH HOH . D 4 HOH A 59 204 61 HOH HOH . D 4 HOH A 60 205 62 HOH HOH . D 4 HOH A 61 206 63 HOH HOH . D 4 HOH A 62 207 65 HOH HOH . D 4 HOH A 63 208 66 HOH HOH . D 4 HOH A 64 209 67 HOH HOH . D 4 HOH A 65 210 68 HOH HOH . D 4 HOH A 66 211 70 HOH HOH . D 4 HOH A 67 212 71 HOH HOH . D 4 HOH A 68 213 1 HOH HOH . D 4 HOH A 69 214 2 HOH HOH . D 4 HOH A 70 215 1 HOH HOH . D 4 HOH A 71 216 2 HOH HOH . D 4 HOH A 72 217 3 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.66 _atom_site.Cartn_y 10.728 _atom_site.Cartn_z 8.075 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 151 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #