data_3IU7 # _model_server_result.job_id LD_gvODyPutkBF0UX7AA7Q _model_server_result.datetime_utc '2024-10-10 15:19:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":287}' # _entry.id 3IU7 # _exptl.entry_id 3IU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3IU7 _cell.length_a 106.412 _cell.length_b 106.412 _cell.length_c 50.422 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -y-1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -106.412 0 0 3 'crystal symmetry operation' 3_445 -x+y-1,-x-1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -53.206 -92.155495 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 134 A ASP 131 1_555 B MN MN . A MN 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc2 A OD2 ASP 134 A ASP 131 1_555 B MN MN . A MN 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc3 A OD2 ASP 145 A ASP 142 1_555 B MN MN . A MN 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc4 A OD1 ASP 145 A ASP 142 1_555 C MN MN . A MN 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc5 A NE2 HIS 208 A HIS 205 1_555 C MN MN . A MN 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc6 A OE2 GLU 241 A GLU 238 1_555 C MN MN . A MN 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc7 A OE2 GLU 272 A GLU 269 1_555 B MN MN . A MN 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc8 A OE1 GLU 272 A GLU 269 1_555 C MN MN . A MN 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc9 B MN MN . A MN 286 1_555 D OXT FCD . A FCD 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc10 B MN MN . A MN 286 1_555 H O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc11 C MN MN . A MN 287 1_555 D OB FCD . A FCD 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc12 C MN MN . A MN 287 1_555 D OXT FCD . A FCD 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3IU7 _atom_sites.fract_transf_matrix[1][1] 0.009397 _atom_sites.fract_transf_matrix[1][2] 0.005426 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010851 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 286 1 MN MN . C 2 MN A 1 287 2 MN MN . D 3 FCD A 1 288 1 FCD FCD . E 3 FCD A 1 289 1 FCD FCD . F 4 SO4 A 1 290 1 SO4 SO4 . G 5 CL A 1 291 1 CL CL . H 6 HOH A 1 292 2 HOH HOH . H 6 HOH A 2 293 3 HOH HOH . H 6 HOH A 3 294 4 HOH HOH . H 6 HOH A 4 295 5 HOH HOH . H 6 HOH A 5 296 6 HOH HOH . H 6 HOH A 6 297 7 HOH HOH . H 6 HOH A 7 298 8 HOH HOH . H 6 HOH A 8 299 9 HOH HOH . H 6 HOH A 9 300 10 HOH HOH . H 6 HOH A 10 301 11 HOH HOH . H 6 HOH A 11 302 12 HOH HOH . H 6 HOH A 12 303 13 HOH HOH . H 6 HOH A 13 304 14 HOH HOH . H 6 HOH A 14 305 15 HOH HOH . H 6 HOH A 15 306 16 HOH HOH . H 6 HOH A 16 307 17 HOH HOH . H 6 HOH A 17 308 18 HOH HOH . H 6 HOH A 18 309 19 HOH HOH . H 6 HOH A 19 310 20 HOH HOH . H 6 HOH A 20 311 21 HOH HOH . H 6 HOH A 21 312 22 HOH HOH . H 6 HOH A 22 313 23 HOH HOH . H 6 HOH A 23 314 24 HOH HOH . H 6 HOH A 24 315 25 HOH HOH . H 6 HOH A 25 316 26 HOH HOH . H 6 HOH A 26 317 27 HOH HOH . H 6 HOH A 27 318 28 HOH HOH . H 6 HOH A 28 319 29 HOH HOH . H 6 HOH A 29 320 30 HOH HOH . H 6 HOH A 30 321 31 HOH HOH . H 6 HOH A 31 322 32 HOH HOH . H 6 HOH A 32 323 33 HOH HOH . H 6 HOH A 33 324 34 HOH HOH . H 6 HOH A 34 325 35 HOH HOH . H 6 HOH A 35 326 36 HOH HOH . H 6 HOH A 36 327 37 HOH HOH . H 6 HOH A 37 328 38 HOH HOH . H 6 HOH A 38 329 39 HOH HOH . H 6 HOH A 39 330 40 HOH HOH . H 6 HOH A 40 331 41 HOH HOH . H 6 HOH A 41 332 42 HOH HOH . H 6 HOH A 42 333 43 HOH HOH . H 6 HOH A 43 334 44 HOH HOH . H 6 HOH A 44 335 45 HOH HOH . H 6 HOH A 45 336 46 HOH HOH . H 6 HOH A 46 337 47 HOH HOH . H 6 HOH A 47 338 48 HOH HOH . H 6 HOH A 48 339 49 HOH HOH . H 6 HOH A 49 340 50 HOH HOH . H 6 HOH A 50 341 51 HOH HOH . H 6 HOH A 51 342 52 HOH HOH . H 6 HOH A 52 343 53 HOH HOH . H 6 HOH A 53 344 54 HOH HOH . H 6 HOH A 54 345 55 HOH HOH . H 6 HOH A 55 346 56 HOH HOH . H 6 HOH A 56 347 57 HOH HOH . H 6 HOH A 57 348 58 HOH HOH . H 6 HOH A 58 349 59 HOH HOH . H 6 HOH A 59 350 60 HOH HOH . H 6 HOH A 60 351 61 HOH HOH . H 6 HOH A 61 352 62 HOH HOH . H 6 HOH A 62 353 63 HOH HOH . H 6 HOH A 63 354 64 HOH HOH . H 6 HOH A 64 355 65 HOH HOH . H 6 HOH A 65 356 66 HOH HOH . H 6 HOH A 66 357 67 HOH HOH . H 6 HOH A 67 358 68 HOH HOH . H 6 HOH A 68 359 69 HOH HOH . H 6 HOH A 69 360 70 HOH HOH . H 6 HOH A 70 361 71 HOH HOH . H 6 HOH A 71 362 72 HOH HOH . H 6 HOH A 72 363 73 HOH HOH . H 6 HOH A 73 364 74 HOH HOH . H 6 HOH A 74 365 75 HOH HOH . H 6 HOH A 75 366 76 HOH HOH . H 6 HOH A 76 367 77 HOH HOH . H 6 HOH A 77 368 78 HOH HOH . H 6 HOH A 78 369 79 HOH HOH . H 6 HOH A 79 370 80 HOH HOH . H 6 HOH A 80 371 81 HOH HOH . H 6 HOH A 81 372 82 HOH HOH . H 6 HOH A 82 373 83 HOH HOH . H 6 HOH A 83 374 84 HOH HOH . H 6 HOH A 84 375 85 HOH HOH . H 6 HOH A 85 376 86 HOH HOH . H 6 HOH A 86 377 87 HOH HOH . H 6 HOH A 87 378 88 HOH HOH . H 6 HOH A 88 379 89 HOH HOH . H 6 HOH A 89 380 90 HOH HOH . H 6 HOH A 90 381 91 HOH HOH . H 6 HOH A 91 382 92 HOH HOH . H 6 HOH A 92 383 93 HOH HOH . H 6 HOH A 93 384 94 HOH HOH . H 6 HOH A 94 385 95 HOH HOH . H 6 HOH A 95 386 96 HOH HOH . H 6 HOH A 96 387 97 HOH HOH . H 6 HOH A 97 388 98 HOH HOH . H 6 HOH A 98 389 99 HOH HOH . H 6 HOH A 99 390 100 HOH HOH . H 6 HOH A 100 391 101 HOH HOH . H 6 HOH A 101 392 102 HOH HOH . H 6 HOH A 102 393 103 HOH HOH . H 6 HOH A 103 394 104 HOH HOH . H 6 HOH A 104 395 105 HOH HOH . H 6 HOH A 105 396 106 HOH HOH . H 6 HOH A 106 397 107 HOH HOH . H 6 HOH A 107 398 108 HOH HOH . H 6 HOH A 108 399 109 HOH HOH . H 6 HOH A 109 400 110 HOH HOH . H 6 HOH A 110 401 111 HOH HOH . H 6 HOH A 111 402 112 HOH HOH . H 6 HOH A 112 403 113 HOH HOH . H 6 HOH A 113 404 114 HOH HOH . H 6 HOH A 114 405 115 HOH HOH . H 6 HOH A 115 406 116 HOH HOH . H 6 HOH A 116 407 117 HOH HOH . H 6 HOH A 117 408 118 HOH HOH . H 6 HOH A 118 409 119 HOH HOH . H 6 HOH A 119 410 120 HOH HOH . H 6 HOH A 120 411 121 HOH HOH . H 6 HOH A 121 412 122 HOH HOH . H 6 HOH A 122 413 123 HOH HOH . H 6 HOH A 123 414 124 HOH HOH . H 6 HOH A 124 415 125 HOH HOH . H 6 HOH A 125 416 126 HOH HOH . H 6 HOH A 126 417 127 HOH HOH . H 6 HOH A 127 418 128 HOH HOH . H 6 HOH A 128 419 129 HOH HOH . H 6 HOH A 129 420 130 HOH HOH . H 6 HOH A 130 421 131 HOH HOH . H 6 HOH A 131 422 132 HOH HOH . H 6 HOH A 132 423 133 HOH HOH . H 6 HOH A 133 424 134 HOH HOH . H 6 HOH A 134 425 135 HOH HOH . H 6 HOH A 135 426 136 HOH HOH . H 6 HOH A 136 427 137 HOH HOH . H 6 HOH A 137 428 138 HOH HOH . H 6 HOH A 138 429 139 HOH HOH . H 6 HOH A 139 430 140 HOH HOH . H 6 HOH A 140 431 141 HOH HOH . H 6 HOH A 141 432 142 HOH HOH . H 6 HOH A 142 433 143 HOH HOH . H 6 HOH A 143 434 144 HOH HOH . H 6 HOH A 144 435 145 HOH HOH . H 6 HOH A 145 436 146 HOH HOH . H 6 HOH A 146 437 147 HOH HOH . H 6 HOH A 147 438 148 HOH HOH . H 6 HOH A 148 439 149 HOH HOH . H 6 HOH A 149 440 150 HOH HOH . H 6 HOH A 150 441 151 HOH HOH . H 6 HOH A 151 442 152 HOH HOH . H 6 HOH A 152 443 153 HOH HOH . H 6 HOH A 153 444 154 HOH HOH . H 6 HOH A 154 445 155 HOH HOH . H 6 HOH A 155 446 156 HOH HOH . H 6 HOH A 156 447 157 HOH HOH . H 6 HOH A 157 448 158 HOH HOH . H 6 HOH A 158 449 159 HOH HOH . H 6 HOH A 159 450 160 HOH HOH . H 6 HOH A 160 451 161 HOH HOH . H 6 HOH A 161 452 162 HOH HOH . H 6 HOH A 162 453 163 HOH HOH . H 6 HOH A 163 454 164 HOH HOH . H 6 HOH A 164 455 165 HOH HOH . H 6 HOH A 165 456 166 HOH HOH . H 6 HOH A 166 457 167 HOH HOH . H 6 HOH A 167 458 168 HOH HOH . H 6 HOH A 168 459 169 HOH HOH . H 6 HOH A 169 460 170 HOH HOH . H 6 HOH A 170 461 171 HOH HOH . H 6 HOH A 171 462 172 HOH HOH . H 6 HOH A 172 463 173 HOH HOH . H 6 HOH A 173 464 174 HOH HOH . H 6 HOH A 174 465 175 HOH HOH . H 6 HOH A 175 466 176 HOH HOH . H 6 HOH A 176 467 177 HOH HOH . H 6 HOH A 177 468 178 HOH HOH . H 6 HOH A 178 469 179 HOH HOH . H 6 HOH A 179 470 180 HOH HOH . H 6 HOH A 180 471 181 HOH HOH . H 6 HOH A 181 472 182 HOH HOH . H 6 HOH A 182 473 183 HOH HOH . H 6 HOH A 183 474 184 HOH HOH . H 6 HOH A 184 475 185 HOH HOH . H 6 HOH A 185 476 186 HOH HOH . H 6 HOH A 186 477 187 HOH HOH . H 6 HOH A 187 478 188 HOH HOH . H 6 HOH A 188 479 189 HOH HOH . H 6 HOH A 189 480 190 HOH HOH . H 6 HOH A 190 481 191 HOH HOH . H 6 HOH A 191 482 192 HOH HOH . H 6 HOH A 192 483 193 HOH HOH . H 6 HOH A 193 484 194 HOH HOH . H 6 HOH A 194 485 195 HOH HOH . H 6 HOH A 195 486 196 HOH HOH . H 6 HOH A 196 487 197 HOH HOH . H 6 HOH A 197 488 198 HOH HOH . H 6 HOH A 198 489 199 HOH HOH . H 6 HOH A 199 490 200 HOH HOH . H 6 HOH A 200 491 201 HOH HOH . H 6 HOH A 201 492 202 HOH HOH . H 6 HOH A 202 493 203 HOH HOH . H 6 HOH A 203 494 204 HOH HOH . H 6 HOH A 204 495 205 HOH HOH . H 6 HOH A 205 496 206 HOH HOH . H 6 HOH A 206 497 207 HOH HOH . H 6 HOH A 207 498 208 HOH HOH . H 6 HOH A 208 499 209 HOH HOH . H 6 HOH A 209 500 210 HOH HOH . H 6 HOH A 210 501 211 HOH HOH . H 6 HOH A 211 502 212 HOH HOH . H 6 HOH A 212 503 213 HOH HOH . H 6 HOH A 213 504 214 HOH HOH . H 6 HOH A 214 505 215 HOH HOH . H 6 HOH A 215 506 216 HOH HOH . H 6 HOH A 216 507 217 HOH HOH . H 6 HOH A 217 508 218 HOH HOH . H 6 HOH A 218 509 219 HOH HOH . H 6 HOH A 219 510 220 HOH HOH . H 6 HOH A 220 511 221 HOH HOH . H 6 HOH A 221 512 222 HOH HOH . H 6 HOH A 222 513 223 HOH HOH . H 6 HOH A 223 514 224 HOH HOH . H 6 HOH A 224 515 225 HOH HOH . H 6 HOH A 225 516 226 HOH HOH . H 6 HOH A 226 517 227 HOH HOH . H 6 HOH A 227 518 228 HOH HOH . H 6 HOH A 228 519 229 HOH HOH . H 6 HOH A 229 520 230 HOH HOH . H 6 HOH A 230 521 231 HOH HOH . H 6 HOH A 231 522 232 HOH HOH . H 6 HOH A 232 523 233 HOH HOH . H 6 HOH A 233 524 234 HOH HOH . H 6 HOH A 234 525 235 HOH HOH . H 6 HOH A 235 526 236 HOH HOH . H 6 HOH A 236 527 237 HOH HOH . H 6 HOH A 237 528 238 HOH HOH . H 6 HOH A 238 529 239 HOH HOH . H 6 HOH A 239 530 240 HOH HOH . H 6 HOH A 240 531 241 HOH HOH . H 6 HOH A 241 532 242 HOH HOH . H 6 HOH A 242 533 243 HOH HOH . H 6 HOH A 243 534 244 HOH HOH . H 6 HOH A 244 535 245 HOH HOH . H 6 HOH A 245 536 246 HOH HOH . H 6 HOH A 246 537 247 HOH HOH . H 6 HOH A 247 538 248 HOH HOH . H 6 HOH A 248 539 249 HOH HOH . H 6 HOH A 249 540 1 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -34.186 _atom_site.Cartn_y -28.633 _atom_site.Cartn_z 0.41 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 287 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #