data_3IU9 # _model_server_result.job_id uktGc9pyi4u8Cm0eejCtBQ _model_server_result.datetime_utc '2024-10-10 17:13:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iu9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":288}' # _entry.id 3IU9 # _exptl.entry_id 3IU9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 275.158 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[(2,4-dichlorobenzyl)sulfanyl]-4H-1,2,4-triazol-3-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3IU9 _cell.length_a 106.216 _cell.length_b 106.216 _cell.length_c 50.794 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 53.108 91.985754 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -53.108 91.985754 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 134 A ASP 131 1_555 B NI NI . A NI 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc2 A OD2 ASP 134 A ASP 131 1_555 B NI NI . A NI 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc3 A OD2 ASP 145 A ASP 142 1_555 B NI NI . A NI 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc4 A OD1 ASP 145 A ASP 142 1_555 C NI NI . A NI 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc5 A NE2 HIS 208 A HIS 205 1_555 C NI NI . A NI 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc6 A OE1 GLU 241 A GLU 238 1_555 C NI NI . A NI 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc7 A OE2 GLU 241 A GLU 238 1_555 C NI NI . A NI 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc8 A OE1 GLU 272 A GLU 269 1_555 B NI NI . A NI 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc9 A OE2 GLU 272 A GLU 269 1_555 B NI NI . A NI 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc10 A OE1 GLU 272 A GLU 269 1_555 C NI NI . A NI 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc11 B NI NI . A NI 286 1_555 D N4 T07 . A T07 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc12 C NI NI . A NI 287 1_555 D N2 T07 . A T07 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'C9 H8 Cl2 N4 S' _chem_comp.formula_weight 275.158 _chem_comp.id T07 _chem_comp.mon_nstd_flag . _chem_comp.name 5-[(2,4-dichlorobenzyl)sulfanyl]-4H-1,2,4-triazol-3-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C4 T07 sing 294 n n S C9 T07 sing 295 n n C1 CL2 T07 sing 296 n n C1 C5 T07 doub 297 n y C1 C7 T07 sing 298 n y N1 C8 T07 sing 299 n y N1 C9 T07 sing 300 n y CL1 C2 T07 sing 301 n n C2 C3 T07 doub 302 n y C2 C5 T07 sing 303 n y N2 N4 T07 sing 304 n y N2 C8 T07 doub 305 n y C3 C4 T07 sing 306 n n C3 C6 T07 sing 307 n y N3 C8 T07 sing 308 n n N4 C9 T07 doub 309 n y C6 C7 T07 doub 310 n y N1 HN1 T07 sing 311 n n N3 HN3 T07 sing 312 n n N3 HN3A T07 sing 313 n n C4 H4 T07 sing 314 n n C4 H4A T07 sing 315 n n C5 H5 T07 sing 316 n n C6 H6 T07 sing 317 n n C7 H7 T07 sing 318 n n # _atom_sites.entry_id 3IU9 _atom_sites.fract_transf_matrix[1][1] 0.009415 _atom_sites.fract_transf_matrix[1][2] 0.005436 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010871 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 286 1 NI NI . C 2 NI A 1 287 2 NI NI . D 3 T07 A 1 288 1 T07 T07 . E 4 SO4 A 1 289 1 SO4 SO4 . F 5 CL A 1 290 1 CL CL . G 6 HOH A 1 291 2 HOH HOH . G 6 HOH A 2 292 3 HOH HOH . G 6 HOH A 3 293 4 HOH HOH . G 6 HOH A 4 294 5 HOH HOH . G 6 HOH A 5 295 6 HOH HOH . G 6 HOH A 6 296 7 HOH HOH . G 6 HOH A 7 297 8 HOH HOH . G 6 HOH A 8 298 9 HOH HOH . G 6 HOH A 9 299 10 HOH HOH . G 6 HOH A 10 300 11 HOH HOH . G 6 HOH A 11 301 12 HOH HOH . G 6 HOH A 12 302 13 HOH HOH . G 6 HOH A 13 303 14 HOH HOH . G 6 HOH A 14 304 15 HOH HOH . G 6 HOH A 15 305 16 HOH HOH . G 6 HOH A 16 306 17 HOH HOH . G 6 HOH A 17 307 18 HOH HOH . G 6 HOH A 18 308 19 HOH HOH . G 6 HOH A 19 309 20 HOH HOH . G 6 HOH A 20 310 21 HOH HOH . G 6 HOH A 21 311 22 HOH HOH . G 6 HOH A 22 312 23 HOH HOH . G 6 HOH A 23 313 24 HOH HOH . G 6 HOH A 24 314 25 HOH HOH . G 6 HOH A 25 315 26 HOH HOH . G 6 HOH A 26 316 27 HOH HOH . G 6 HOH A 27 317 28 HOH HOH . G 6 HOH A 28 318 29 HOH HOH . G 6 HOH A 29 319 30 HOH HOH . G 6 HOH A 30 320 31 HOH HOH . G 6 HOH A 31 321 32 HOH HOH . G 6 HOH A 32 322 33 HOH HOH . G 6 HOH A 33 323 34 HOH HOH . G 6 HOH A 34 324 35 HOH HOH . G 6 HOH A 35 325 36 HOH HOH . G 6 HOH A 36 326 37 HOH HOH . G 6 HOH A 37 327 38 HOH HOH . G 6 HOH A 38 328 39 HOH HOH . G 6 HOH A 39 329 40 HOH HOH . G 6 HOH A 40 330 41 HOH HOH . G 6 HOH A 41 331 42 HOH HOH . G 6 HOH A 42 332 43 HOH HOH . G 6 HOH A 43 333 44 HOH HOH . G 6 HOH A 44 334 45 HOH HOH . G 6 HOH A 45 335 46 HOH HOH . G 6 HOH A 46 336 47 HOH HOH . G 6 HOH A 47 337 48 HOH HOH . G 6 HOH A 48 338 49 HOH HOH . G 6 HOH A 49 339 50 HOH HOH . G 6 HOH A 50 340 51 HOH HOH . G 6 HOH A 51 341 52 HOH HOH . G 6 HOH A 52 342 53 HOH HOH . G 6 HOH A 53 343 54 HOH HOH . G 6 HOH A 54 344 55 HOH HOH . G 6 HOH A 55 345 56 HOH HOH . G 6 HOH A 56 346 57 HOH HOH . G 6 HOH A 57 347 58 HOH HOH . G 6 HOH A 58 348 59 HOH HOH . G 6 HOH A 59 349 60 HOH HOH . G 6 HOH A 60 350 61 HOH HOH . G 6 HOH A 61 351 62 HOH HOH . G 6 HOH A 62 352 63 HOH HOH . G 6 HOH A 63 353 64 HOH HOH . G 6 HOH A 64 354 65 HOH HOH . G 6 HOH A 65 355 66 HOH HOH . G 6 HOH A 66 356 67 HOH HOH . G 6 HOH A 67 357 68 HOH HOH . G 6 HOH A 68 358 69 HOH HOH . G 6 HOH A 69 359 70 HOH HOH . G 6 HOH A 70 360 71 HOH HOH . G 6 HOH A 71 361 72 HOH HOH . G 6 HOH A 72 362 73 HOH HOH . G 6 HOH A 73 363 74 HOH HOH . G 6 HOH A 74 364 75 HOH HOH . G 6 HOH A 75 365 76 HOH HOH . G 6 HOH A 76 366 77 HOH HOH . G 6 HOH A 77 367 78 HOH HOH . G 6 HOH A 78 368 79 HOH HOH . G 6 HOH A 79 369 80 HOH HOH . G 6 HOH A 80 370 81 HOH HOH . G 6 HOH A 81 371 82 HOH HOH . G 6 HOH A 82 372 83 HOH HOH . G 6 HOH A 83 373 84 HOH HOH . G 6 HOH A 84 374 85 HOH HOH . G 6 HOH A 85 375 86 HOH HOH . G 6 HOH A 86 376 87 HOH HOH . G 6 HOH A 87 377 88 HOH HOH . G 6 HOH A 88 378 89 HOH HOH . G 6 HOH A 89 379 90 HOH HOH . G 6 HOH A 90 380 91 HOH HOH . G 6 HOH A 91 381 92 HOH HOH . G 6 HOH A 92 382 93 HOH HOH . G 6 HOH A 93 383 94 HOH HOH . G 6 HOH A 94 384 95 HOH HOH . G 6 HOH A 95 385 96 HOH HOH . G 6 HOH A 96 386 97 HOH HOH . G 6 HOH A 97 387 98 HOH HOH . G 6 HOH A 98 388 99 HOH HOH . G 6 HOH A 99 389 100 HOH HOH . G 6 HOH A 100 390 101 HOH HOH . G 6 HOH A 101 391 102 HOH HOH . G 6 HOH A 102 392 103 HOH HOH . G 6 HOH A 103 393 104 HOH HOH . G 6 HOH A 104 394 105 HOH HOH . G 6 HOH A 105 395 106 HOH HOH . G 6 HOH A 106 396 107 HOH HOH . G 6 HOH A 107 397 108 HOH HOH . G 6 HOH A 108 398 109 HOH HOH . G 6 HOH A 109 399 110 HOH HOH . G 6 HOH A 110 400 111 HOH HOH . G 6 HOH A 111 401 112 HOH HOH . G 6 HOH A 112 402 113 HOH HOH . G 6 HOH A 113 403 114 HOH HOH . G 6 HOH A 114 404 115 HOH HOH . G 6 HOH A 115 405 116 HOH HOH . G 6 HOH A 116 406 117 HOH HOH . G 6 HOH A 117 407 118 HOH HOH . G 6 HOH A 118 408 119 HOH HOH . G 6 HOH A 119 409 120 HOH HOH . G 6 HOH A 120 410 121 HOH HOH . G 6 HOH A 121 411 122 HOH HOH . G 6 HOH A 122 412 123 HOH HOH . G 6 HOH A 123 413 124 HOH HOH . G 6 HOH A 124 414 125 HOH HOH . G 6 HOH A 125 415 126 HOH HOH . G 6 HOH A 126 416 127 HOH HOH . G 6 HOH A 127 417 128 HOH HOH . G 6 HOH A 128 418 129 HOH HOH . G 6 HOH A 129 419 130 HOH HOH . G 6 HOH A 130 420 131 HOH HOH . G 6 HOH A 131 421 132 HOH HOH . G 6 HOH A 132 422 133 HOH HOH . G 6 HOH A 133 423 134 HOH HOH . G 6 HOH A 134 424 135 HOH HOH . G 6 HOH A 135 425 136 HOH HOH . G 6 HOH A 136 426 137 HOH HOH . G 6 HOH A 137 427 138 HOH HOH . G 6 HOH A 138 428 139 HOH HOH . G 6 HOH A 139 429 140 HOH HOH . G 6 HOH A 140 430 141 HOH HOH . G 6 HOH A 141 431 142 HOH HOH . G 6 HOH A 142 432 143 HOH HOH . G 6 HOH A 143 433 144 HOH HOH . G 6 HOH A 144 434 145 HOH HOH . G 6 HOH A 145 435 146 HOH HOH . G 6 HOH A 146 436 147 HOH HOH . G 6 HOH A 147 437 148 HOH HOH . G 6 HOH A 148 438 149 HOH HOH . G 6 HOH A 149 439 150 HOH HOH . G 6 HOH A 150 440 151 HOH HOH . G 6 HOH A 151 441 152 HOH HOH . G 6 HOH A 152 442 153 HOH HOH . G 6 HOH A 153 443 154 HOH HOH . G 6 HOH A 154 444 155 HOH HOH . G 6 HOH A 155 445 156 HOH HOH . G 6 HOH A 156 446 157 HOH HOH . G 6 HOH A 157 447 158 HOH HOH . G 6 HOH A 158 448 159 HOH HOH . G 6 HOH A 159 449 160 HOH HOH . G 6 HOH A 160 450 161 HOH HOH . G 6 HOH A 161 451 162 HOH HOH . G 6 HOH A 162 452 163 HOH HOH . G 6 HOH A 163 453 164 HOH HOH . G 6 HOH A 164 454 165 HOH HOH . G 6 HOH A 165 455 166 HOH HOH . G 6 HOH A 166 456 167 HOH HOH . G 6 HOH A 167 457 168 HOH HOH . G 6 HOH A 168 458 169 HOH HOH . G 6 HOH A 169 459 170 HOH HOH . G 6 HOH A 170 460 171 HOH HOH . G 6 HOH A 171 461 172 HOH HOH . G 6 HOH A 172 462 173 HOH HOH . G 6 HOH A 173 463 174 HOH HOH . G 6 HOH A 174 464 175 HOH HOH . G 6 HOH A 175 465 176 HOH HOH . G 6 HOH A 176 466 177 HOH HOH . G 6 HOH A 177 467 178 HOH HOH . G 6 HOH A 178 468 179 HOH HOH . G 6 HOH A 179 469 180 HOH HOH . G 6 HOH A 180 470 181 HOH HOH . G 6 HOH A 181 471 182 HOH HOH . G 6 HOH A 182 472 183 HOH HOH . G 6 HOH A 183 473 184 HOH HOH . G 6 HOH A 184 474 185 HOH HOH . G 6 HOH A 185 475 186 HOH HOH . G 6 HOH A 186 476 187 HOH HOH . G 6 HOH A 187 477 188 HOH HOH . G 6 HOH A 188 478 189 HOH HOH . G 6 HOH A 189 479 190 HOH HOH . G 6 HOH A 190 480 191 HOH HOH . G 6 HOH A 191 481 192 HOH HOH . G 6 HOH A 192 482 193 HOH HOH . G 6 HOH A 193 483 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S T07 . . . D 3 -10.817 43.828 -4.381 1 11.85 ? S T07 288 A 1 HETATM 2 C C1 T07 . . . D 3 -9.941 49.127 -3.983 1 12.09 ? C1 T07 288 A 1 HETATM 3 N N1 T07 . . . D 3 -8.145 43.839 -3.766 1 10.38 ? N1 T07 288 A 1 HETATM 4 CL CL1 T07 . . . D 3 -7.736 46.736 -6.283 1 23.8 ? CL1 T07 288 A 1 HETATM 5 C C2 T07 . . . D 3 -9.07 47.353 -5.242 1 15.87 ? C2 T07 288 A 1 HETATM 6 N N2 T07 . . . D 3 -8.186 43.723 -1.583 1 6.44 ? N2 T07 288 A 1 HETATM 7 CL CL2 T07 . . . D 3 -9.792 50.788 -3.471 1 14.02 ? CL2 T07 288 A 1 HETATM 8 C C3 T07 . . . D 3 -10.075 46.542 -4.86 1 10.97 ? C3 T07 288 A 1 HETATM 9 N N3 T07 . . . D 3 -6.024 43.88 -2.577 1 12.63 ? N3 T07 288 A 1 HETATM 10 C C4 T07 . . . D 3 -10.184 45.144 -5.451 1 10.63 ? C4 T07 288 A 1 HETATM 11 N N4 T07 . . . D 3 -9.531 43.666 -1.991 1 10.25 ? N4 T07 288 A 1 HETATM 12 C C5 T07 . . . D 3 -8.917 48.672 -4.809 1 14.73 ? C5 T07 288 A 1 HETATM 13 C C6 T07 . . . D 3 -10.978 47.006 -3.894 1 12 ? C6 T07 288 A 1 HETATM 14 C C7 T07 . . . D 3 -10.874 48.294 -3.49 1 10.04 ? C7 T07 288 A 1 HETATM 15 C C8 T07 . . . D 3 -7.395 43.824 -2.641 1 11.43 ? C8 T07 288 A 1 HETATM 16 C C9 T07 . . . D 3 -9.417 43.777 -3.317 1 12.8 ? C9 T07 288 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #