data_3IW6 # _model_server_result.job_id b7X4FxQQYJP19NE1iW813Q _model_server_result.datetime_utc '2024-12-26 15:45:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1000}' # _entry.id 3IW6 # _exptl.entry_id 3IW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IW6 _cell.length_a 70 _cell.length_b 68.74 _cell.length_c 74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 70 n n C1 C2 BOG sing 71 n n C1 O5 BOG sing 72 n n C1 H1 BOG sing 73 n n O1 C1' BOG sing 74 n n C2 O2 BOG sing 75 n n C2 C3 BOG sing 76 n n C2 H2 BOG sing 77 n n O2 HO2 BOG sing 78 n n C3 O3 BOG sing 79 n n C3 C4 BOG sing 80 n n C3 H3 BOG sing 81 n n O3 HO3 BOG sing 82 n n C4 O4 BOG sing 83 n n C4 C5 BOG sing 84 n n C4 H4 BOG sing 85 n n O4 HO4 BOG sing 86 n n C5 O5 BOG sing 87 n n C5 C6 BOG sing 88 n n C5 H5 BOG sing 89 n n C6 O6 BOG sing 90 n n C6 H61 BOG sing 91 n n C6 H62 BOG sing 92 n n O6 HO6 BOG sing 93 n n C1' C2' BOG sing 94 n n C1' "H1'1" BOG sing 95 n n C1' "H1'2" BOG sing 96 n n C2' C3' BOG sing 97 n n C2' "H2'1" BOG sing 98 n n C2' "H2'2" BOG sing 99 n n C3' C4' BOG sing 100 n n C3' "H3'1" BOG sing 101 n n C3' "H3'2" BOG sing 102 n n C4' C5' BOG sing 103 n n C4' "H4'1" BOG sing 104 n n C4' "H4'2" BOG sing 105 n n C5' C6' BOG sing 106 n n C5' "H5'1" BOG sing 107 n n C5' "H5'2" BOG sing 108 n n C6' C7' BOG sing 109 n n C6' "H6'1" BOG sing 110 n n C6' "H6'2" BOG sing 111 n n C7' C8' BOG sing 112 n n C7' "H7'1" BOG sing 113 n n C7' "H7'2" BOG sing 114 n n C8' "H8'1" BOG sing 115 n n C8' "H8'2" BOG sing 116 n n C8' "H8'3" BOG sing 117 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3IW6 _atom_sites.fract_transf_matrix[1][1] 0.014286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014548 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013514 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PP0 A 1 361 1 PP0 PP0 . C 3 BOG A 1 1000 1000 BOG BOG . D 3 BOG A 1 362 1000 BOG BOG . E 3 BOG A 1 363 1000 BOG BOG . F 4 HOH A 1 364 1 HOH HOH . F 4 HOH A 2 365 2 HOH HOH . F 4 HOH A 3 366 3 HOH HOH . F 4 HOH A 4 367 4 HOH HOH . F 4 HOH A 5 368 5 HOH HOH . F 4 HOH A 6 369 6 HOH HOH . F 4 HOH A 7 370 7 HOH HOH . F 4 HOH A 8 371 8 HOH HOH . F 4 HOH A 9 372 9 HOH HOH . F 4 HOH A 10 373 10 HOH HOH . F 4 HOH A 11 374 11 HOH HOH . F 4 HOH A 12 375 12 HOH HOH . F 4 HOH A 13 376 13 HOH HOH . F 4 HOH A 14 377 14 HOH HOH . F 4 HOH A 15 378 15 HOH HOH . F 4 HOH A 16 379 16 HOH HOH . F 4 HOH A 17 380 17 HOH HOH . F 4 HOH A 18 381 18 HOH HOH . F 4 HOH A 19 382 19 HOH HOH . F 4 HOH A 20 383 20 HOH HOH . F 4 HOH A 21 384 21 HOH HOH . F 4 HOH A 22 385 22 HOH HOH . F 4 HOH A 23 386 24 HOH HOH . F 4 HOH A 24 387 26 HOH HOH . F 4 HOH A 25 388 27 HOH HOH . F 4 HOH A 26 389 28 HOH HOH . F 4 HOH A 27 390 30 HOH HOH . F 4 HOH A 28 391 31 HOH HOH . F 4 HOH A 29 392 32 HOH HOH . F 4 HOH A 30 393 33 HOH HOH . F 4 HOH A 31 394 34 HOH HOH . F 4 HOH A 32 395 35 HOH HOH . F 4 HOH A 33 396 36 HOH HOH . F 4 HOH A 34 397 37 HOH HOH . F 4 HOH A 35 398 38 HOH HOH . F 4 HOH A 36 399 39 HOH HOH . F 4 HOH A 37 400 40 HOH HOH . F 4 HOH A 38 401 41 HOH HOH . F 4 HOH A 39 402 42 HOH HOH . F 4 HOH A 40 403 43 HOH HOH . F 4 HOH A 41 404 44 HOH HOH . F 4 HOH A 42 405 45 HOH HOH . F 4 HOH A 43 406 46 HOH HOH . F 4 HOH A 44 407 47 HOH HOH . F 4 HOH A 45 408 48 HOH HOH . F 4 HOH A 46 409 49 HOH HOH . F 4 HOH A 47 410 50 HOH HOH . F 4 HOH A 48 411 51 HOH HOH . F 4 HOH A 49 412 53 HOH HOH . F 4 HOH A 50 413 54 HOH HOH . F 4 HOH A 51 414 55 HOH HOH . F 4 HOH A 52 415 56 HOH HOH . F 4 HOH A 53 416 57 HOH HOH . F 4 HOH A 54 417 58 HOH HOH . F 4 HOH A 55 418 59 HOH HOH . F 4 HOH A 56 419 60 HOH HOH . F 4 HOH A 57 420 61 HOH HOH . F 4 HOH A 58 421 62 HOH HOH . F 4 HOH A 59 422 63 HOH HOH . F 4 HOH A 60 423 64 HOH HOH . F 4 HOH A 61 424 66 HOH HOH . F 4 HOH A 62 425 67 HOH HOH . F 4 HOH A 63 426 68 HOH HOH . F 4 HOH A 64 427 69 HOH HOH . F 4 HOH A 65 428 70 HOH HOH . F 4 HOH A 66 429 71 HOH HOH . F 4 HOH A 67 430 72 HOH HOH . F 4 HOH A 68 431 73 HOH HOH . F 4 HOH A 69 432 74 HOH HOH . F 4 HOH A 70 433 76 HOH HOH . F 4 HOH A 71 434 77 HOH HOH . F 4 HOH A 72 435 78 HOH HOH . F 4 HOH A 73 436 79 HOH HOH . F 4 HOH A 74 437 80 HOH HOH . F 4 HOH A 75 438 81 HOH HOH . F 4 HOH A 76 439 82 HOH HOH . F 4 HOH A 77 440 84 HOH HOH . F 4 HOH A 78 441 85 HOH HOH . F 4 HOH A 79 442 86 HOH HOH . F 4 HOH A 80 443 87 HOH HOH . F 4 HOH A 81 444 88 HOH HOH . F 4 HOH A 82 445 89 HOH HOH . F 4 HOH A 83 446 90 HOH HOH . F 4 HOH A 84 447 91 HOH HOH . F 4 HOH A 85 448 92 HOH HOH . F 4 HOH A 86 449 93 HOH HOH . F 4 HOH A 87 450 96 HOH HOH . F 4 HOH A 88 451 97 HOH HOH . F 4 HOH A 89 452 98 HOH HOH . F 4 HOH A 90 453 100 HOH HOH . F 4 HOH A 91 454 101 HOH HOH . F 4 HOH A 92 455 102 HOH HOH . F 4 HOH A 93 456 103 HOH HOH . F 4 HOH A 94 457 104 HOH HOH . F 4 HOH A 95 458 105 HOH HOH . F 4 HOH A 96 459 106 HOH HOH . F 4 HOH A 97 460 107 HOH HOH . F 4 HOH A 98 461 108 HOH HOH . F 4 HOH A 99 462 109 HOH HOH . F 4 HOH A 100 463 110 HOH HOH . F 4 HOH A 101 464 111 HOH HOH . F 4 HOH A 102 465 112 HOH HOH . F 4 HOH A 103 466 113 HOH HOH . F 4 HOH A 104 467 114 HOH HOH . F 4 HOH A 105 468 115 HOH HOH . F 4 HOH A 106 469 116 HOH HOH . F 4 HOH A 107 470 117 HOH HOH . F 4 HOH A 108 471 118 HOH HOH . F 4 HOH A 109 472 119 HOH HOH . F 4 HOH A 110 473 120 HOH HOH . F 4 HOH A 111 474 121 HOH HOH . F 4 HOH A 112 475 122 HOH HOH . F 4 HOH A 113 476 123 HOH HOH . F 4 HOH A 114 477 124 HOH HOH . F 4 HOH A 115 478 125 HOH HOH . F 4 HOH A 116 479 126 HOH HOH . F 4 HOH A 117 480 127 HOH HOH . F 4 HOH A 118 481 128 HOH HOH . F 4 HOH A 119 482 129 HOH HOH . F 4 HOH A 120 483 130 HOH HOH . F 4 HOH A 121 484 131 HOH HOH . F 4 HOH A 122 485 132 HOH HOH . F 4 HOH A 123 486 133 HOH HOH . F 4 HOH A 124 487 134 HOH HOH . F 4 HOH A 125 488 135 HOH HOH . F 4 HOH A 126 489 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . C 3 -7.178 22.848 -11.817 1 31.87 ? C1 BOG 1000 A 1 HETATM 2 O O1 BOG . . . C 3 -8.119 23.345 -10.88 1 31.47 ? O1 BOG 1000 A 1 HETATM 3 C C2 BOG . . . C 3 -5.801 23.44 -11.544 1 31.63 ? C2 BOG 1000 A 1 HETATM 4 O O2 BOG . . . C 3 -5.89 24.82 -11.821 1 29.79 ? O2 BOG 1000 A 1 HETATM 5 C C3 BOG . . . C 3 -4.744 22.805 -12.459 1 34 ? C3 BOG 1000 A 1 HETATM 6 O O3 BOG . . . C 3 -3.455 23.117 -11.953 1 34.95 ? O3 BOG 1000 A 1 HETATM 7 C C4 BOG . . . C 3 -4.9 21.273 -12.581 1 34.97 ? C4 BOG 1000 A 1 HETATM 8 O O4 BOG . . . C 3 -4.149 20.808 -13.699 1 36.51 ? O4 BOG 1000 A 1 HETATM 9 C C5 BOG . . . C 3 -6.392 20.913 -12.763 1 36.24 ? C5 BOG 1000 A 1 HETATM 10 O O5 BOG . . . C 3 -7.046 21.455 -11.604 1 34.42 ? O5 BOG 1000 A 1 HETATM 11 C C6 BOG . . . C 3 -6.879 19.447 -12.881 1 34.97 ? C6 BOG 1000 A 1 HETATM 12 O O6 BOG . . . C 3 -6.313 18.669 -11.847 1 37.73 ? O6 BOG 1000 A 1 HETATM 13 C C1' BOG . . . C 3 -9.397 22.76 -11.128 1 32.5 ? C1' BOG 1000 A 1 HETATM 14 C C2' BOG . . . C 3 -10.217 23.841 -11.835 1 33.6 ? C2' BOG 1000 A 1 HETATM 15 C C3' BOG . . . C 3 -11.57 23.305 -12.272 1 33.27 ? C3' BOG 1000 A 1 HETATM 16 C C4' BOG . . . C 3 -12.169 24.278 -13.28 1 32.95 ? C4' BOG 1000 A 1 HETATM 17 C C5' BOG . . . C 3 -13.68 24.152 -13.32 1 32.61 ? C5' BOG 1000 A 1 HETATM 18 C C6' BOG . . . C 3 -14.25 25.52 -13.665 1 34.86 ? C6' BOG 1000 A 1 HETATM 19 C C7' BOG . . . C 3 -14.864 25.535 -15.053 1 35.85 ? C7' BOG 1000 A 1 HETATM 20 C C8' BOG . . . C 3 -16.366 25.257 -14.983 1 37.49 ? C8' BOG 1000 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #