data_3IW6 # _model_server_result.job_id nxKCi-lKcVqDQqqRHT54_A _model_server_result.datetime_utc '2024-12-26 14:56:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3iw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3IW6 # _exptl.entry_id 3IW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.511 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 4-[(4-benzylpiperazin-1-yl)carbonyl]-1-ethyl-3,5-dimethyl-1H-pyrrole-2-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IW6 _cell.length_a 70 _cell.length_b 68.74 _cell.length_c 74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H31 N3 O3' _chem_comp.formula_weight 397.511 _chem_comp.id PP0 _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 4-[(4-benzylpiperazin-1-yl)carbonyl]-1-ethyl-3,5-dimethyl-1H-pyrrole-2-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAL CAA PP0 sing 308 n n CAA HAA PP0 sing 309 n n CAA HAAA PP0 sing 310 n n CAA HAAB PP0 sing 311 n n CAB CAM PP0 sing 312 n n CAB HAB PP0 sing 313 n n CAB HABA PP0 sing 314 n n CAB HABB PP0 sing 315 n n CAC CAW PP0 sing 316 n n CAC HAC PP0 sing 317 n n CAC HACA PP0 sing 318 n n CAC HACB PP0 sing 319 n n CAX CAD PP0 sing 320 n n CAD HAD PP0 sing 321 n n CAD HADA PP0 sing 322 n n CAD HADB PP0 sing 323 n n OAE CAT PP0 doub 324 n n CAU OAF PP0 doub 325 n n CAI CAG PP0 doub 326 n y CAG CAH PP0 sing 327 n y CAG HAG PP0 sing 328 n n CAH CAJ PP0 doub 329 n y CAH HAH PP0 sing 330 n n CAI CAK PP0 sing 331 n y CAI HAI PP0 sing 332 n n CAV CAJ PP0 sing 333 n y CAJ HAJ PP0 sing 334 n n CAK CAV PP0 doub 335 n y CAK HAK PP0 sing 336 n n CAL OAS PP0 sing 337 n n CAL HAL PP0 sing 338 n n CAL HALA PP0 sing 339 n n NBC CAM PP0 sing 340 n n CAM HAM PP0 sing 341 n n CAM HAMA PP0 sing 342 n n CAN NBA PP0 sing 343 n n CAN CAP PP0 sing 344 n n CAN HAN PP0 sing 345 n n CAN HANA PP0 sing 346 n n NBA CAO PP0 sing 347 n n CAO CAQ PP0 sing 348 n n CAO HAO PP0 sing 349 n n CAO HAOA PP0 sing 350 n n CAP NBB PP0 sing 351 n n CAP HAP PP0 sing 352 n n CAP HAPA PP0 sing 353 n n NBB CAQ PP0 sing 354 n n CAQ HAQ PP0 sing 355 n n CAQ HAQA PP0 sing 356 n n CAV CAR PP0 sing 357 n n CAR NBA PP0 sing 358 n n CAR HAR PP0 sing 359 n n CAR HARA PP0 sing 360 n n CAT OAS PP0 sing 361 n n CAT CAZ PP0 sing 362 n n NBB CAU PP0 sing 363 n n CAY CAU PP0 sing 364 n n CAW CAZ PP0 doub 365 n y CAW CAY PP0 sing 366 n y CAY CAX PP0 doub 367 n y NBC CAX PP0 sing 368 n y CAZ NBC PP0 sing 369 n y # _atom_sites.entry_id 3IW6 _atom_sites.fract_transf_matrix[1][1] 0.014286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014548 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013514 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PP0 A 1 361 1 PP0 PP0 . C 3 BOG A 1 1000 1000 BOG BOG . D 3 BOG A 1 362 1000 BOG BOG . E 3 BOG A 1 363 1000 BOG BOG . F 4 HOH A 1 364 1 HOH HOH . F 4 HOH A 2 365 2 HOH HOH . F 4 HOH A 3 366 3 HOH HOH . F 4 HOH A 4 367 4 HOH HOH . F 4 HOH A 5 368 5 HOH HOH . F 4 HOH A 6 369 6 HOH HOH . F 4 HOH A 7 370 7 HOH HOH . F 4 HOH A 8 371 8 HOH HOH . F 4 HOH A 9 372 9 HOH HOH . F 4 HOH A 10 373 10 HOH HOH . F 4 HOH A 11 374 11 HOH HOH . F 4 HOH A 12 375 12 HOH HOH . F 4 HOH A 13 376 13 HOH HOH . F 4 HOH A 14 377 14 HOH HOH . F 4 HOH A 15 378 15 HOH HOH . F 4 HOH A 16 379 16 HOH HOH . F 4 HOH A 17 380 17 HOH HOH . F 4 HOH A 18 381 18 HOH HOH . F 4 HOH A 19 382 19 HOH HOH . F 4 HOH A 20 383 20 HOH HOH . F 4 HOH A 21 384 21 HOH HOH . F 4 HOH A 22 385 22 HOH HOH . F 4 HOH A 23 386 24 HOH HOH . F 4 HOH A 24 387 26 HOH HOH . F 4 HOH A 25 388 27 HOH HOH . F 4 HOH A 26 389 28 HOH HOH . F 4 HOH A 27 390 30 HOH HOH . F 4 HOH A 28 391 31 HOH HOH . F 4 HOH A 29 392 32 HOH HOH . F 4 HOH A 30 393 33 HOH HOH . F 4 HOH A 31 394 34 HOH HOH . F 4 HOH A 32 395 35 HOH HOH . F 4 HOH A 33 396 36 HOH HOH . F 4 HOH A 34 397 37 HOH HOH . F 4 HOH A 35 398 38 HOH HOH . F 4 HOH A 36 399 39 HOH HOH . F 4 HOH A 37 400 40 HOH HOH . F 4 HOH A 38 401 41 HOH HOH . F 4 HOH A 39 402 42 HOH HOH . F 4 HOH A 40 403 43 HOH HOH . F 4 HOH A 41 404 44 HOH HOH . F 4 HOH A 42 405 45 HOH HOH . F 4 HOH A 43 406 46 HOH HOH . F 4 HOH A 44 407 47 HOH HOH . F 4 HOH A 45 408 48 HOH HOH . F 4 HOH A 46 409 49 HOH HOH . F 4 HOH A 47 410 50 HOH HOH . F 4 HOH A 48 411 51 HOH HOH . F 4 HOH A 49 412 53 HOH HOH . F 4 HOH A 50 413 54 HOH HOH . F 4 HOH A 51 414 55 HOH HOH . F 4 HOH A 52 415 56 HOH HOH . F 4 HOH A 53 416 57 HOH HOH . F 4 HOH A 54 417 58 HOH HOH . F 4 HOH A 55 418 59 HOH HOH . F 4 HOH A 56 419 60 HOH HOH . F 4 HOH A 57 420 61 HOH HOH . F 4 HOH A 58 421 62 HOH HOH . F 4 HOH A 59 422 63 HOH HOH . F 4 HOH A 60 423 64 HOH HOH . F 4 HOH A 61 424 66 HOH HOH . F 4 HOH A 62 425 67 HOH HOH . F 4 HOH A 63 426 68 HOH HOH . F 4 HOH A 64 427 69 HOH HOH . F 4 HOH A 65 428 70 HOH HOH . F 4 HOH A 66 429 71 HOH HOH . F 4 HOH A 67 430 72 HOH HOH . F 4 HOH A 68 431 73 HOH HOH . F 4 HOH A 69 432 74 HOH HOH . F 4 HOH A 70 433 76 HOH HOH . F 4 HOH A 71 434 77 HOH HOH . F 4 HOH A 72 435 78 HOH HOH . F 4 HOH A 73 436 79 HOH HOH . F 4 HOH A 74 437 80 HOH HOH . F 4 HOH A 75 438 81 HOH HOH . F 4 HOH A 76 439 82 HOH HOH . F 4 HOH A 77 440 84 HOH HOH . F 4 HOH A 78 441 85 HOH HOH . F 4 HOH A 79 442 86 HOH HOH . F 4 HOH A 80 443 87 HOH HOH . F 4 HOH A 81 444 88 HOH HOH . F 4 HOH A 82 445 89 HOH HOH . F 4 HOH A 83 446 90 HOH HOH . F 4 HOH A 84 447 91 HOH HOH . F 4 HOH A 85 448 92 HOH HOH . F 4 HOH A 86 449 93 HOH HOH . F 4 HOH A 87 450 96 HOH HOH . F 4 HOH A 88 451 97 HOH HOH . F 4 HOH A 89 452 98 HOH HOH . F 4 HOH A 90 453 100 HOH HOH . F 4 HOH A 91 454 101 HOH HOH . F 4 HOH A 92 455 102 HOH HOH . F 4 HOH A 93 456 103 HOH HOH . F 4 HOH A 94 457 104 HOH HOH . F 4 HOH A 95 458 105 HOH HOH . F 4 HOH A 96 459 106 HOH HOH . F 4 HOH A 97 460 107 HOH HOH . F 4 HOH A 98 461 108 HOH HOH . F 4 HOH A 99 462 109 HOH HOH . F 4 HOH A 100 463 110 HOH HOH . F 4 HOH A 101 464 111 HOH HOH . F 4 HOH A 102 465 112 HOH HOH . F 4 HOH A 103 466 113 HOH HOH . F 4 HOH A 104 467 114 HOH HOH . F 4 HOH A 105 468 115 HOH HOH . F 4 HOH A 106 469 116 HOH HOH . F 4 HOH A 107 470 117 HOH HOH . F 4 HOH A 108 471 118 HOH HOH . F 4 HOH A 109 472 119 HOH HOH . F 4 HOH A 110 473 120 HOH HOH . F 4 HOH A 111 474 121 HOH HOH . F 4 HOH A 112 475 122 HOH HOH . F 4 HOH A 113 476 123 HOH HOH . F 4 HOH A 114 477 124 HOH HOH . F 4 HOH A 115 478 125 HOH HOH . F 4 HOH A 116 479 126 HOH HOH . F 4 HOH A 117 480 127 HOH HOH . F 4 HOH A 118 481 128 HOH HOH . F 4 HOH A 119 482 129 HOH HOH . F 4 HOH A 120 483 130 HOH HOH . F 4 HOH A 121 484 131 HOH HOH . F 4 HOH A 122 485 132 HOH HOH . F 4 HOH A 123 486 133 HOH HOH . F 4 HOH A 124 487 134 HOH HOH . F 4 HOH A 125 488 135 HOH HOH . F 4 HOH A 126 489 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA PP0 . . . B 2 -27.376 0.205 6.216 1 48.09 ? CAA PP0 361 A 1 HETATM 2 C CAB PP0 . . . B 2 -24.635 -3.552 5.089 1 40.78 ? CAB PP0 361 A 1 HETATM 3 C CAC PP0 . . . B 2 -20.52 0.516 5.42 1 35.9 ? CAC PP0 361 A 1 HETATM 4 C CAD PP0 . . . B 2 -21.438 -4.295 6.929 1 37.02 ? CAD PP0 361 A 1 HETATM 5 O OAE PP0 . . . B 2 -23.506 0.979 4.915 1 46.35 ? OAE PP0 361 A 1 HETATM 6 O OAF PP0 . . . B 2 -18.656 -2.379 7.465 1 27.01 ? OAF PP0 361 A 1 HETATM 7 C CAG PP0 . . . B 2 -12.587 -6.068 2.36 1 19.04 ? CAG PP0 361 A 1 HETATM 8 C CAH PP0 . . . B 2 -13.604 -6.887 2.868 1 20.42 ? CAH PP0 361 A 1 HETATM 9 C CAI PP0 . . . B 2 -12.913 -4.789 1.895 1 21.21 ? CAI PP0 361 A 1 HETATM 10 C CAJ PP0 . . . B 2 -14.924 -6.428 2.91 1 19.17 ? CAJ PP0 361 A 1 HETATM 11 C CAK PP0 . . . B 2 -14.239 -4.326 1.925 1 18.97 ? CAK PP0 361 A 1 HETATM 12 C CAL PP0 . . . B 2 -26.13 0.404 5.319 1 46.83 ? CAL PP0 361 A 1 HETATM 13 C CAM PP0 . . . B 2 -24.079 -2.987 6.426 1 37.25 ? CAM PP0 361 A 1 HETATM 14 C CAN PP0 . . . B 2 -18.353 -3.108 2.983 1 20.98 ? CAN PP0 361 A 1 HETATM 15 C CAO PP0 . . . B 2 -16.536 -3.628 4.598 1 19.66 ? CAO PP0 361 A 1 HETATM 16 C CAP PP0 . . . B 2 -18.791 -1.962 3.894 1 21.25 ? CAP PP0 361 A 1 HETATM 17 C CAQ PP0 . . . B 2 -16.856 -2.426 5.438 1 22.61 ? CAQ PP0 361 A 1 HETATM 18 C CAR PP0 . . . B 2 -16.711 -4.687 2.471 1 18.41 ? CAR PP0 361 A 1 HETATM 19 O OAS PP0 . . . B 2 -25.043 -0.483 5.738 1 44.75 ? OAS PP0 361 A 1 HETATM 20 C CAT PP0 . . . B 2 -23.751 -0.09 5.48 1 39.95 ? CAT PP0 361 A 1 HETATM 21 C CAU PP0 . . . B 2 -19.113 -2.175 6.347 1 30.13 ? CAU PP0 361 A 1 HETATM 22 C CAV PP0 . . . B 2 -15.238 -5.153 2.441 1 20.13 ? CAV PP0 361 A 1 HETATM 23 C CAW PP0 . . . B 2 -21.236 -0.774 5.819 1 34.5 ? CAW PP0 361 A 1 HETATM 24 C CAX PP0 . . . B 2 -21.614 -2.859 6.469 1 34.03 ? CAX PP0 361 A 1 HETATM 25 C CAY PP0 . . . B 2 -20.611 -1.938 6.211 1 31.96 ? CAY PP0 361 A 1 HETATM 26 C CAZ PP0 . . . B 2 -22.608 -1.035 5.857 1 37.92 ? CAZ PP0 361 A 1 HETATM 27 N NBA PP0 . . . B 2 -16.909 -3.418 3.182 1 20.1 ? NBA PP0 361 A 1 HETATM 28 N NBB PP0 . . . B 2 -18.301 -2.18 5.27 1 25.14 ? NBB PP0 361 A 1 HETATM 29 N NBC PP0 . . . B 2 -22.788 -2.301 6.244 1 35.97 ? NBC PP0 361 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 29 #