data_3IXL # _model_server_result.job_id HNK7wTf1ao8z4-2l2-N8XA _model_server_result.datetime_utc '2024-11-17 14:19:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ixl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":5000}' # _entry.id 3IXL # _exptl.entry_id 3IXL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.148 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-PHENYLACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3IXL _cell.length_a 38.392 _cell.length_b 63.353 _cell.length_c 82.413 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3IXL _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 147 A GLY 147 1_555 A N CME 148 A CME 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C CME 148 A CME 148 1_555 A N ARG 149 A ARG 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C8 H8 O2' _chem_comp.formula_weight 136.148 _chem_comp.id PAC _chem_comp.mon_nstd_flag . _chem_comp.name '2-PHENYLACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PAC sing 271 n n C1 O1 PAC doub 272 n n C1 O2 PAC sing 273 n n C2 C1' PAC sing 274 n n C2 H21 PAC sing 275 n n C2 H22 PAC sing 276 n n C1' C2' PAC doub 277 n y C1' C6' PAC sing 278 n y C2' C3' PAC sing 279 n y C2' H2' PAC sing 280 n n C3' C4' PAC doub 281 n y C3' H3' PAC sing 282 n n C4' C5' PAC sing 283 n y C4' H4' PAC sing 284 n n C5' C6' PAC doub 285 n y C5' H5' PAC sing 286 n n C6' H6' PAC sing 287 n n O2 HO2 PAC sing 288 n n # _atom_sites.entry_id 3IXL _atom_sites.fract_transf_matrix[1][1] 0.026047 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 6000 6000 SO4 SO4 . C 3 PAC A 1 5000 1 PAC PAC . D 4 GOL A 1 4000 2 GOL GOL . E 5 HOH A 1 1001 1001 HOH HOH . E 5 HOH A 2 1002 1002 HOH HOH . E 5 HOH A 3 1003 1003 HOH HOH . E 5 HOH A 4 1004 1004 HOH HOH . E 5 HOH A 5 1005 1005 HOH HOH . E 5 HOH A 6 1006 1006 HOH HOH . E 5 HOH A 7 1007 1007 HOH HOH . E 5 HOH A 8 1009 1009 HOH HOH . E 5 HOH A 9 1010 1010 HOH HOH . E 5 HOH A 10 1011 1011 HOH HOH . E 5 HOH A 11 1013 1013 HOH HOH . E 5 HOH A 12 1015 1015 HOH HOH . E 5 HOH A 13 1020 1020 HOH HOH . E 5 HOH A 14 1021 1021 HOH HOH . E 5 HOH A 15 1022 1022 HOH HOH . E 5 HOH A 16 1023 1023 HOH HOH . E 5 HOH A 17 1024 1024 HOH HOH . E 5 HOH A 18 1025 1025 HOH HOH . E 5 HOH A 19 1026 1026 HOH HOH . E 5 HOH A 20 1027 1027 HOH HOH . E 5 HOH A 21 1028 1028 HOH HOH . E 5 HOH A 22 1030 1030 HOH HOH . E 5 HOH A 23 1031 1031 HOH HOH . E 5 HOH A 24 1032 1032 HOH HOH . E 5 HOH A 25 1033 1033 HOH HOH . E 5 HOH A 26 1036 1036 HOH HOH . E 5 HOH A 27 1037 1037 HOH HOH . E 5 HOH A 28 1038 1038 HOH HOH . E 5 HOH A 29 1039 1039 HOH HOH . E 5 HOH A 30 1040 1040 HOH HOH . E 5 HOH A 31 1041 1041 HOH HOH . E 5 HOH A 32 1042 1042 HOH HOH . E 5 HOH A 33 1043 1043 HOH HOH . E 5 HOH A 34 1044 1044 HOH HOH . E 5 HOH A 35 1045 1045 HOH HOH . E 5 HOH A 36 1046 1046 HOH HOH . E 5 HOH A 37 1050 1050 HOH HOH . E 5 HOH A 38 1051 1051 HOH HOH . E 5 HOH A 39 1052 1052 HOH HOH . E 5 HOH A 40 1053 1053 HOH HOH . E 5 HOH A 41 1054 1054 HOH HOH . E 5 HOH A 42 1055 1055 HOH HOH . E 5 HOH A 43 1057 1057 HOH HOH . E 5 HOH A 44 1058 1058 HOH HOH . E 5 HOH A 45 1059 1059 HOH HOH . E 5 HOH A 46 1060 1060 HOH HOH . E 5 HOH A 47 1061 1061 HOH HOH . E 5 HOH A 48 1062 1062 HOH HOH . E 5 HOH A 49 1063 1063 HOH HOH . E 5 HOH A 50 1064 1064 HOH HOH . E 5 HOH A 51 1065 1065 HOH HOH . E 5 HOH A 52 1066 1066 HOH HOH . E 5 HOH A 53 1067 1067 HOH HOH . E 5 HOH A 54 1068 1068 HOH HOH . E 5 HOH A 55 1069 1069 HOH HOH . E 5 HOH A 56 1070 1070 HOH HOH . E 5 HOH A 57 1071 1071 HOH HOH . E 5 HOH A 58 1072 1072 HOH HOH . E 5 HOH A 59 1074 1074 HOH HOH . E 5 HOH A 60 1075 1075 HOH HOH . E 5 HOH A 61 1076 1076 HOH HOH . E 5 HOH A 62 1077 1077 HOH HOH . E 5 HOH A 63 1078 1078 HOH HOH . E 5 HOH A 64 1079 1079 HOH HOH . E 5 HOH A 65 1080 1080 HOH HOH . E 5 HOH A 66 1081 1081 HOH HOH . E 5 HOH A 67 1082 1082 HOH HOH . E 5 HOH A 68 1083 1083 HOH HOH . E 5 HOH A 69 1084 1084 HOH HOH . E 5 HOH A 70 1085 1085 HOH HOH . E 5 HOH A 71 1086 1086 HOH HOH . E 5 HOH A 72 1088 1088 HOH HOH . E 5 HOH A 73 1089 1089 HOH HOH . E 5 HOH A 74 1090 1090 HOH HOH . E 5 HOH A 75 1091 1091 HOH HOH . E 5 HOH A 76 1092 1092 HOH HOH . E 5 HOH A 77 1093 1093 HOH HOH . E 5 HOH A 78 1094 1094 HOH HOH . E 5 HOH A 79 1095 1095 HOH HOH . E 5 HOH A 80 1097 1097 HOH HOH . E 5 HOH A 81 1098 1098 HOH HOH . E 5 HOH A 82 1099 1099 HOH HOH . E 5 HOH A 83 1100 1100 HOH HOH . E 5 HOH A 84 1101 1101 HOH HOH . E 5 HOH A 85 1102 1102 HOH HOH . E 5 HOH A 86 1103 1103 HOH HOH . E 5 HOH A 87 1104 1104 HOH HOH . E 5 HOH A 88 1106 1106 HOH HOH . E 5 HOH A 89 1107 1107 HOH HOH . E 5 HOH A 90 1108 1108 HOH HOH . E 5 HOH A 91 1109 1109 HOH HOH . E 5 HOH A 92 1110 1110 HOH HOH . E 5 HOH A 93 1111 1111 HOH HOH . E 5 HOH A 94 1112 1112 HOH HOH . E 5 HOH A 95 1113 1113 HOH HOH . E 5 HOH A 96 1114 1114 HOH HOH . E 5 HOH A 97 1115 1115 HOH HOH . E 5 HOH A 98 1116 1116 HOH HOH . E 5 HOH A 99 1117 1117 HOH HOH . E 5 HOH A 100 1118 1118 HOH HOH . E 5 HOH A 101 1120 1120 HOH HOH . E 5 HOH A 102 1121 1121 HOH HOH . E 5 HOH A 103 1122 1122 HOH HOH . E 5 HOH A 104 1123 1123 HOH HOH . E 5 HOH A 105 1124 1124 HOH HOH . E 5 HOH A 106 1125 1125 HOH HOH . E 5 HOH A 107 1126 1126 HOH HOH . E 5 HOH A 108 1127 1127 HOH HOH . E 5 HOH A 109 1128 1128 HOH HOH . E 5 HOH A 110 1129 1129 HOH HOH . E 5 HOH A 111 1130 1130 HOH HOH . E 5 HOH A 112 1131 1131 HOH HOH . E 5 HOH A 113 1133 1133 HOH HOH . E 5 HOH A 114 1134 1134 HOH HOH . E 5 HOH A 115 1135 1135 HOH HOH . E 5 HOH A 116 1136 1136 HOH HOH . E 5 HOH A 117 1137 1137 HOH HOH . E 5 HOH A 118 1138 1138 HOH HOH . E 5 HOH A 119 1139 1139 HOH HOH . E 5 HOH A 120 1140 1140 HOH HOH . E 5 HOH A 121 1141 1141 HOH HOH . E 5 HOH A 122 1142 1142 HOH HOH . E 5 HOH A 123 1143 1143 HOH HOH . E 5 HOH A 124 1145 1145 HOH HOH . E 5 HOH A 125 1147 1147 HOH HOH . E 5 HOH A 126 1148 1148 HOH HOH . E 5 HOH A 127 1149 1149 HOH HOH . E 5 HOH A 128 1150 1150 HOH HOH . E 5 HOH A 129 1151 1151 HOH HOH . E 5 HOH A 130 1152 1152 HOH HOH . E 5 HOH A 131 1153 1153 HOH HOH . E 5 HOH A 132 1154 1154 HOH HOH . E 5 HOH A 133 1155 1155 HOH HOH . E 5 HOH A 134 1156 1156 HOH HOH . E 5 HOH A 135 1157 1157 HOH HOH . E 5 HOH A 136 1160 1160 HOH HOH . E 5 HOH A 137 1162 1162 HOH HOH . E 5 HOH A 138 1163 1163 HOH HOH . E 5 HOH A 139 1165 1165 HOH HOH . E 5 HOH A 140 1166 1166 HOH HOH . E 5 HOH A 141 1167 1167 HOH HOH . E 5 HOH A 142 1168 1168 HOH HOH . E 5 HOH A 143 1169 1169 HOH HOH . E 5 HOH A 144 1170 1170 HOH HOH . E 5 HOH A 145 1171 1171 HOH HOH . E 5 HOH A 146 1172 1172 HOH HOH . E 5 HOH A 147 1173 1173 HOH HOH . E 5 HOH A 148 1174 1174 HOH HOH . E 5 HOH A 149 1175 1175 HOH HOH . E 5 HOH A 150 1176 1176 HOH HOH . E 5 HOH A 151 1177 1177 HOH HOH . E 5 HOH A 152 1178 1178 HOH HOH . E 5 HOH A 153 1180 1180 HOH HOH . E 5 HOH A 154 1181 1181 HOH HOH . E 5 HOH A 155 1182 1182 HOH HOH . E 5 HOH A 156 1183 1183 HOH HOH . E 5 HOH A 157 1184 1184 HOH HOH . E 5 HOH A 158 1185 1185 HOH HOH . E 5 HOH A 159 1186 1186 HOH HOH . E 5 HOH A 160 1187 1187 HOH HOH . E 5 HOH A 161 1188 1188 HOH HOH . E 5 HOH A 162 1189 1189 HOH HOH . E 5 HOH A 163 1190 1190 HOH HOH . E 5 HOH A 164 1191 1191 HOH HOH . E 5 HOH A 165 1192 1192 HOH HOH . E 5 HOH A 166 1193 1193 HOH HOH . E 5 HOH A 167 1194 1194 HOH HOH . E 5 HOH A 168 1195 1195 HOH HOH . E 5 HOH A 169 1196 1196 HOH HOH . E 5 HOH A 170 1197 1197 HOH HOH . E 5 HOH A 171 1198 1198 HOH HOH . E 5 HOH A 172 1199 1199 HOH HOH . E 5 HOH A 173 1200 1200 HOH HOH . E 5 HOH A 174 1201 1201 HOH HOH . E 5 HOH A 175 1202 1202 HOH HOH . E 5 HOH A 176 1203 1203 HOH HOH . E 5 HOH A 177 1204 1204 HOH HOH . E 5 HOH A 178 1205 1205 HOH HOH . E 5 HOH A 179 1207 1207 HOH HOH . E 5 HOH A 180 1208 1208 HOH HOH . E 5 HOH A 181 1209 1209 HOH HOH . E 5 HOH A 182 1211 1211 HOH HOH . E 5 HOH A 183 1212 1212 HOH HOH . E 5 HOH A 184 1213 1213 HOH HOH . E 5 HOH A 185 1214 1214 HOH HOH . E 5 HOH A 186 1215 1215 HOH HOH . E 5 HOH A 187 1216 1216 HOH HOH . E 5 HOH A 188 1217 1217 HOH HOH . E 5 HOH A 189 1218 1218 HOH HOH . E 5 HOH A 190 1219 1219 HOH HOH . E 5 HOH A 191 1220 1220 HOH HOH . E 5 HOH A 192 1221 1221 HOH HOH . E 5 HOH A 193 1222 1222 HOH HOH . E 5 HOH A 194 1223 1223 HOH HOH . E 5 HOH A 195 1224 1224 HOH HOH . E 5 HOH A 196 1225 1225 HOH HOH . E 5 HOH A 197 1226 1226 HOH HOH . E 5 HOH A 198 1227 1227 HOH HOH . E 5 HOH A 199 1228 1228 HOH HOH . E 5 HOH A 200 1229 1229 HOH HOH . E 5 HOH A 201 1230 1230 HOH HOH . E 5 HOH A 202 1231 1231 HOH HOH . E 5 HOH A 203 1232 1232 HOH HOH . E 5 HOH A 204 1233 1233 HOH HOH . E 5 HOH A 205 1234 1234 HOH HOH . E 5 HOH A 206 1235 1235 HOH HOH . E 5 HOH A 207 1236 1236 HOH HOH . E 5 HOH A 208 1237 1237 HOH HOH . E 5 HOH A 209 1238 1238 HOH HOH . E 5 HOH A 210 1239 1239 HOH HOH . E 5 HOH A 211 1240 1240 HOH HOH . E 5 HOH A 212 1241 1241 HOH HOH . E 5 HOH A 213 1242 1242 HOH HOH . E 5 HOH A 214 1243 1243 HOH HOH . E 5 HOH A 215 1244 1244 HOH HOH . E 5 HOH A 216 1245 1245 HOH HOH . E 5 HOH A 217 1246 1246 HOH HOH . E 5 HOH A 218 1247 1247 HOH HOH . E 5 HOH A 219 1248 1248 HOH HOH . E 5 HOH A 220 1249 1249 HOH HOH . E 5 HOH A 221 1250 1250 HOH HOH . E 5 HOH A 222 1251 1251 HOH HOH . E 5 HOH A 223 1252 1252 HOH HOH . E 5 HOH A 224 1253 1253 HOH HOH . E 5 HOH A 225 1254 1254 HOH HOH . E 5 HOH A 226 1255 1255 HOH HOH . E 5 HOH A 227 1256 1256 HOH HOH . E 5 HOH A 228 1257 1257 HOH HOH . E 5 HOH A 229 1260 1260 HOH HOH . E 5 HOH A 230 1261 1261 HOH HOH . E 5 HOH A 231 1263 1263 HOH HOH . E 5 HOH A 232 1265 1265 HOH HOH . E 5 HOH A 233 1266 1266 HOH HOH . E 5 HOH A 234 1267 1267 HOH HOH . E 5 HOH A 235 1268 1268 HOH HOH . E 5 HOH A 236 1269 1269 HOH HOH . E 5 HOH A 237 1270 1270 HOH HOH . E 5 HOH A 238 1271 1271 HOH HOH . E 5 HOH A 239 1272 1272 HOH HOH . E 5 HOH A 240 1274 1274 HOH HOH . E 5 HOH A 241 1276 1276 HOH HOH . E 5 HOH A 242 1277 1277 HOH HOH . E 5 HOH A 243 1278 1278 HOH HOH . E 5 HOH A 244 1279 1279 HOH HOH . E 5 HOH A 245 1280 1280 HOH HOH . E 5 HOH A 246 1281 1281 HOH HOH . E 5 HOH A 247 1282 1282 HOH HOH . E 5 HOH A 248 1283 1283 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PAC . . . C 3 6.182 12.601 16.028 1 7.51 ? C1 PAC 5000 A 1 HETATM 2 C C2 PAC . . . C 3 6.443 11.695 14.839 1 10.86 ? C2 PAC 5000 A 1 HETATM 3 C C1' PAC . . . C 3 5.703 11.895 13.532 1 10.3 ? C1' PAC 5000 A 1 HETATM 4 C C2' PAC . . . C 3 5.529 10.749 12.75 1 11.27 ? C2' PAC 5000 A 1 HETATM 5 C C3' PAC . . . C 3 4.873 10.813 11.522 1 11.25 ? C3' PAC 5000 A 1 HETATM 6 C C4' PAC . . . C 3 4.391 12.036 11.065 1 10.46 ? C4' PAC 5000 A 1 HETATM 7 C C5' PAC . . . C 3 4.557 13.189 11.842 1 11.27 ? C5' PAC 5000 A 1 HETATM 8 C C6' PAC . . . C 3 5.22 13.129 13.072 1 9.88 ? C6' PAC 5000 A 1 HETATM 9 O O1 PAC . . . C 3 5.318 13.522 16.014 1 6.87 ? O1 PAC 5000 A 1 HETATM 10 O O2 PAC . . . C 3 6.894 12.363 17.045 1 8.56 ? O2 PAC 5000 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 10 #