data_3J6L # _model_server_result.job_id 1MZCkiYPFd3EuJbw5ZfflQ _model_server_result.datetime_utc '2024-10-20 08:05:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3j6l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 3J6L # _exptl.entry_id 3J6L _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3J6L _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3J6L _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 60-MERIC 60 'complete icosahedral assembly' 1 ? monomeric 1 'icosahedral asymmetric unit' 2 ? pentameric 5 'icosahedral pentamer' 3 ? hexameric 6 'icosahedral 23 hexamer' 4 ? monomeric 1 'icosahedral asymmetric unit, std point frame' 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 (1-60) A,B,C,D 2 1 A,B,C,D 3 (1-5) A,B,C,D 4 (1,2,6,10,23,24) A,B,C,D 5 P # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0 -1 0 1 0 0 0 0 1 0 0 0 1 'point symmetry operation' ? ? 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.5 -0.809017 0.309017 0.809017 0.309017 -0.5 0.309017 0.5 0.809017 0 0 0 3 'point symmetry operation' ? ? -0.309017 -0.5 0.809017 0.5 -0.809017 -0.309017 0.809017 0.309017 0.5 0 0 0 4 'point symmetry operation' ? ? -0.309017 0.5 0.809017 -0.5 -0.809017 0.309017 0.809017 -0.309017 0.5 0 0 0 5 'point symmetry operation' ? ? 0.5 0.809017 0.309017 -0.809017 0.309017 0.5 0.309017 -0.5 0.809017 0 0 0 6 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 0 0 0 7 'point symmetry operation' ? ? -0.5 0.809017 -0.309017 -0.809017 -0.309017 0.5 0.309017 0.5 0.809017 0 0 0 8 'point symmetry operation' ? ? 0.309017 0.5 -0.809017 -0.5 0.809017 0.309017 0.809017 0.309017 0.5 0 0 0 9 'point symmetry operation' ? ? 0.309017 -0.5 -0.809017 0.5 0.809017 -0.309017 0.809017 -0.309017 0.5 0 0 0 10 'point symmetry operation' ? ? -0.5 -0.809017 -0.309017 0.809017 -0.309017 -0.5 0.309017 -0.5 0.809017 0 0 0 11 'point symmetry operation' ? ? 1 0 0 0 -1 0 0 0 -1 0 0 0 12 'point symmetry operation' ? ? 0.5 -0.809017 0.309017 -0.809017 -0.309017 0.5 -0.309017 -0.5 -0.809017 0 0 0 13 'point symmetry operation' ? ? -0.309017 -0.5 0.809017 -0.5 0.809017 0.309017 -0.809017 -0.309017 -0.5 0 0 0 14 'point symmetry operation' ? ? -0.309017 0.5 0.809017 0.5 0.809017 -0.309017 -0.809017 0.309017 -0.5 0 0 0 15 'point symmetry operation' ? ? 0.5 0.809017 0.309017 0.809017 -0.309017 -0.5 -0.309017 0.5 -0.809017 0 0 0 16 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 0 0 0 17 'point symmetry operation' ? ? -0.5 0.809017 -0.309017 0.809017 0.309017 -0.5 -0.309017 -0.5 -0.809017 0 0 0 18 'point symmetry operation' ? ? 0.309017 0.5 -0.809017 0.5 -0.809017 -0.309017 -0.809017 -0.309017 -0.5 0 0 0 19 'point symmetry operation' ? ? 0.309017 -0.5 -0.809017 -0.5 -0.809017 0.309017 -0.809017 0.309017 -0.5 0 0 0 20 'point symmetry operation' ? ? -0.5 -0.809017 -0.309017 -0.809017 0.309017 0.5 -0.309017 0.5 -0.809017 0 0 0 21 'point symmetry operation' ? ? 0 -1 0 0 0 -1 1 0 0 0 0 0 22 'point symmetry operation' ? ? -0.809017 -0.309017 0.5 -0.309017 -0.5 -0.809017 0.5 -0.809017 0.309017 0 0 0 23 'point symmetry operation' ? ? -0.5 0.809017 0.309017 -0.809017 -0.309017 -0.5 -0.309017 -0.5 0.809017 0 0 0 24 'point symmetry operation' ? ? 0.5 0.809017 -0.309017 -0.809017 0.309017 -0.5 -0.309017 0.5 0.809017 0 0 0 25 'point symmetry operation' ? ? 0.809017 -0.309017 -0.5 -0.309017 0.5 -0.809017 0.5 0.809017 0.309017 0 0 0 26 'point symmetry operation' ? ? 0 1 0 0 0 -1 -1 0 0 0 0 0 27 'point symmetry operation' ? ? 0.809017 0.309017 -0.5 -0.309017 -0.5 -0.809017 -0.5 0.809017 -0.309017 0 0 0 28 'point symmetry operation' ? ? 0.5 -0.809017 -0.309017 -0.809017 -0.309017 -0.5 0.309017 0.5 -0.809017 0 0 0 29 'point symmetry operation' ? ? -0.5 -0.809017 0.309017 -0.809017 0.309017 -0.5 0.309017 -0.5 -0.809017 0 0 0 30 'point symmetry operation' ? ? -0.809017 0.309017 0.5 -0.309017 0.5 -0.809017 -0.5 -0.809017 -0.309017 0 0 0 31 'point symmetry operation' ? ? 0 1 0 0 0 1 1 0 0 0 0 0 32 'point symmetry operation' ? ? 0.809017 0.309017 -0.5 0.309017 0.5 0.809017 0.5 -0.809017 0.309017 0 0 0 33 'point symmetry operation' ? ? 0.5 -0.809017 -0.309017 0.809017 0.309017 0.5 -0.309017 -0.5 0.809017 0 0 0 34 'point symmetry operation' ? ? -0.5 -0.809017 0.309017 0.809017 -0.309017 0.5 -0.309017 0.5 0.809017 0 0 0 35 'point symmetry operation' ? ? -0.809017 0.309017 0.5 0.309017 -0.5 0.809017 0.5 0.809017 0.309017 0 0 0 36 'point symmetry operation' ? ? 0 -1 0 0 0 1 -1 0 0 0 0 0 37 'point symmetry operation' ? ? -0.809017 -0.309017 0.5 0.309017 0.5 0.809017 -0.5 0.809017 -0.309017 0 0 0 38 'point symmetry operation' ? ? -0.5 0.809017 0.309017 0.809017 0.309017 0.5 0.309017 0.5 -0.809017 0 0 0 39 'point symmetry operation' ? ? 0.5 0.809017 -0.309017 0.809017 -0.309017 0.5 0.309017 -0.5 -0.809017 0 0 0 40 'point symmetry operation' ? ? 0.809017 -0.309017 -0.5 0.309017 -0.5 0.809017 -0.5 -0.809017 -0.309017 0 0 0 41 'point symmetry operation' ? ? 0 0 1 -1 0 0 0 -1 0 0 0 0 42 'point symmetry operation' ? ? 0.309017 0.5 0.809017 -0.5 0.809017 -0.309017 -0.809017 -0.309017 0.5 0 0 0 43 'point symmetry operation' ? ? 0.809017 0.309017 0.5 0.309017 0.5 -0.809017 -0.5 0.809017 0.309017 0 0 0 44 'point symmetry operation' ? ? 0.809017 -0.309017 0.5 0.309017 -0.5 -0.809017 0.5 0.809017 -0.309017 0 0 0 45 'point symmetry operation' ? ? 0.309017 -0.5 0.809017 -0.5 -0.809017 -0.309017 0.809017 -0.309017 -0.5 0 0 0 46 'point symmetry operation' ? ? 0 0 1 1 0 0 0 1 0 0 0 0 47 'point symmetry operation' ? ? 0.309017 0.5 0.809017 0.5 -0.809017 0.309017 0.809017 0.309017 -0.5 0 0 0 48 'point symmetry operation' ? ? 0.809017 0.309017 0.5 -0.309017 -0.5 0.809017 0.5 -0.809017 -0.309017 0 0 0 49 'point symmetry operation' ? ? 0.809017 -0.309017 0.5 -0.309017 0.5 0.809017 -0.5 -0.809017 0.309017 0 0 0 50 'point symmetry operation' ? ? 0.309017 -0.5 0.809017 0.5 0.809017 0.309017 -0.809017 0.309017 0.5 0 0 0 51 'point symmetry operation' ? ? 0 0 -1 -1 0 0 0 1 0 0 0 0 52 'point symmetry operation' ? ? -0.309017 -0.5 -0.809017 -0.5 0.809017 -0.309017 0.809017 0.309017 -0.5 0 0 0 53 'point symmetry operation' ? ? -0.809017 -0.309017 -0.5 0.309017 0.5 -0.809017 0.5 -0.809017 -0.309017 0 0 0 54 'point symmetry operation' ? ? -0.809017 0.309017 -0.5 0.309017 -0.5 -0.809017 -0.5 -0.809017 0.309017 0 0 0 55 'point symmetry operation' ? ? -0.309017 0.5 -0.809017 -0.5 -0.809017 -0.309017 -0.809017 0.309017 0.5 0 0 0 56 'point symmetry operation' ? ? 0 0 -1 1 0 0 0 -1 0 0 0 0 57 'point symmetry operation' ? ? -0.309017 -0.5 -0.809017 0.5 -0.809017 0.309017 -0.809017 -0.309017 0.5 0 0 0 58 'point symmetry operation' ? ? -0.809017 -0.309017 -0.5 -0.309017 -0.5 0.809017 -0.5 0.809017 0.309017 0 0 0 59 'point symmetry operation' ? ? -0.809017 0.309017 -0.5 -0.309017 0.5 0.809017 0.5 0.809017 -0.309017 0 0 0 60 'point symmetry operation' ? ? -0.309017 0.5 -0.809017 0.5 0.809017 0.309017 0.809017 -0.309017 -0.5 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 27 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 41 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 106 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 120 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.103 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3J6L _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 B 1 401 401 SO4 SO4 . C 2 SO4 B 1 402 403 SO4 SO4 . D 3 HOH B 1 501 404 HOH HOH . D 3 HOH B 2 502 405 HOH HOH . D 3 HOH B 3 503 406 HOH HOH . D 3 HOH B 4 504 407 HOH HOH . D 3 HOH B 5 505 408 HOH HOH . D 3 HOH B 6 506 409 HOH HOH . D 3 HOH B 7 507 410 HOH HOH . D 3 HOH B 8 508 411 HOH HOH . D 3 HOH B 9 509 412 HOH HOH . D 3 HOH B 10 510 413 HOH HOH . D 3 HOH B 11 511 414 HOH HOH . D 3 HOH B 12 512 415 HOH HOH . D 3 HOH B 13 513 416 HOH HOH . D 3 HOH B 14 514 417 HOH HOH . D 3 HOH B 15 515 418 HOH HOH . D 3 HOH B 16 516 419 HOH HOH . D 3 HOH B 17 517 420 HOH HOH . D 3 HOH B 18 518 421 HOH HOH . D 3 HOH B 19 519 422 HOH HOH . D 3 HOH B 20 520 423 HOH HOH . D 3 HOH B 21 521 424 HOH HOH . D 3 HOH B 22 522 425 HOH HOH . D 3 HOH B 23 523 426 HOH HOH . D 3 HOH B 24 524 427 HOH HOH . D 3 HOH B 25 525 428 HOH HOH . D 3 HOH B 26 526 429 HOH HOH . D 3 HOH B 27 527 430 HOH HOH . D 3 HOH B 28 528 431 HOH HOH . D 3 HOH B 29 529 432 HOH HOH . D 3 HOH B 30 530 433 HOH HOH . D 3 HOH B 31 531 434 HOH HOH . D 3 HOH B 32 532 435 HOH HOH . D 3 HOH B 33 533 436 HOH HOH . D 3 HOH B 34 534 437 HOH HOH . D 3 HOH B 35 535 438 HOH HOH . D 3 HOH B 36 536 439 HOH HOH . D 3 HOH B 37 537 440 HOH HOH . D 3 HOH B 38 538 441 HOH HOH . D 3 HOH B 39 539 442 HOH HOH . D 3 HOH B 40 540 443 HOH HOH . D 3 HOH B 41 541 444 HOH HOH . D 3 HOH B 42 542 445 HOH HOH . D 3 HOH B 43 543 446 HOH HOH . D 3 HOH B 44 544 447 HOH HOH . D 3 HOH B 45 545 448 HOH HOH . D 3 HOH B 46 546 449 HOH HOH . D 3 HOH B 47 547 450 HOH HOH . D 3 HOH B 48 548 451 HOH HOH . D 3 HOH B 49 549 452 HOH HOH . D 3 HOH B 50 550 453 HOH HOH . D 3 HOH B 51 551 454 HOH HOH . D 3 HOH B 52 552 455 HOH HOH . D 3 HOH B 53 553 456 HOH HOH . D 3 HOH B 54 554 457 HOH HOH . D 3 HOH B 55 555 458 HOH HOH . D 3 HOH B 56 556 459 HOH HOH . D 3 HOH B 57 557 460 HOH HOH . D 3 HOH B 58 558 461 HOH HOH . D 3 HOH B 59 559 462 HOH HOH . D 3 HOH B 60 560 463 HOH HOH . D 3 HOH B 61 561 464 HOH HOH . D 3 HOH B 62 562 465 HOH HOH . D 3 HOH B 63 563 466 HOH HOH . D 3 HOH B 64 564 467 HOH HOH . D 3 HOH B 65 565 468 HOH HOH . D 3 HOH B 66 566 469 HOH HOH . D 3 HOH B 67 567 470 HOH HOH . D 3 HOH B 68 568 471 HOH HOH . D 3 HOH B 69 569 472 HOH HOH . D 3 HOH B 70 570 473 HOH HOH . D 3 HOH B 71 571 474 HOH HOH . D 3 HOH B 72 572 475 HOH HOH . D 3 HOH B 73 573 476 HOH HOH . D 3 HOH B 74 574 477 HOH HOH . D 3 HOH B 75 575 478 HOH HOH . D 3 HOH B 76 576 479 HOH HOH . D 3 HOH B 77 577 480 HOH HOH . D 3 HOH B 78 578 481 HOH HOH . D 3 HOH B 79 579 482 HOH HOH . D 3 HOH B 80 580 483 HOH HOH . D 3 HOH B 81 581 484 HOH HOH . D 3 HOH B 82 582 485 HOH HOH . D 3 HOH B 83 583 486 HOH HOH . D 3 HOH B 84 584 487 HOH HOH . D 3 HOH B 85 585 488 HOH HOH . D 3 HOH B 86 586 489 HOH HOH . D 3 HOH B 87 587 490 HOH HOH . D 3 HOH B 88 588 491 HOH HOH . D 3 HOH B 89 589 492 HOH HOH . D 3 HOH B 90 590 493 HOH HOH . D 3 HOH B 91 591 494 HOH HOH . D 3 HOH B 92 592 495 HOH HOH . D 3 HOH B 93 593 496 HOH HOH . D 3 HOH B 94 594 497 HOH HOH . D 3 HOH B 95 595 498 HOH HOH . D 3 HOH B 96 596 499 HOH HOH . D 3 HOH B 97 597 500 HOH HOH . D 3 HOH B 98 598 501 HOH HOH . D 3 HOH B 99 599 502 HOH HOH . D 3 HOH B 100 600 503 HOH HOH . D 3 HOH B 101 601 504 HOH HOH . D 3 HOH B 102 602 505 HOH HOH . D 3 HOH B 103 603 506 HOH HOH . D 3 HOH B 104 604 507 HOH HOH . D 3 HOH B 105 605 508 HOH HOH . D 3 HOH B 106 606 509 HOH HOH . D 3 HOH B 107 607 510 HOH HOH . D 3 HOH B 108 608 511 HOH HOH . D 3 HOH B 109 609 512 HOH HOH . D 3 HOH B 110 610 513 HOH HOH . D 3 HOH B 111 611 514 HOH HOH . D 3 HOH B 112 612 515 HOH HOH . D 3 HOH B 113 613 516 HOH HOH . D 3 HOH B 114 614 517 HOH HOH . D 3 HOH B 115 615 518 HOH HOH . D 3 HOH B 116 616 519 HOH HOH . D 3 HOH B 117 617 520 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 26.238 14.704 157.651 1 25.03 ? S SO4 401 B 1 HETATM 2 O O1 SO4 . . . B 2 25.753 16.041 158.099 1 29.63 ? O1 SO4 401 B 1 HETATM 3 O O2 SO4 . . . B 2 25.554 14.339 156.349 1 22.14 ? O2 SO4 401 B 1 HETATM 4 O O3 SO4 . . . B 2 25.941 13.727 158.686 1 19.88 ? O3 SO4 401 B 1 HETATM 5 O O4 SO4 . . . B 2 27.724 14.771 157.351 1 27.55 ? O4 SO4 401 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #