data_3J9C # _model_server_result.job_id j82Kft9X-uGbODPVbBrPuQ _model_server_result.datetime_utc '2024-11-21 14:19:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3j9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 3J9C # _exptl.entry_id 3J9C _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3J9C _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3J9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 7-MERIC 7 'complete point assembly' 1 ? monomeric 1 'point asymmetric unit' 2 ? monomeric 1 'point asymmetric unit, std point frame' 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 (1-7) A,B,C 2 1 A,B,C 3 P # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.81012 0.586264 0 0.586264 0.81012 0 0 0 -1 0 0 -35.33935 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.62349 0.781831 0 -0.781831 0.62349 0 0 0 1 0 0 0 3 'point symmetry operation' ? ? -0.222521 0.974928 0 -0.974928 -0.222521 0 0 0 1 0 0 0 4 'point symmetry operation' ? ? -0.900969 0.433884 0 -0.433884 -0.900969 0 0 0 1 0 0 0 5 'point symmetry operation' ? ? -0.900969 -0.433884 0 0.433884 -0.900969 0 0 0 1 0 0 0 6 'point symmetry operation' ? ? -0.222521 -0.974928 0 0.974928 -0.222521 0 0 0 1 0 0 0 7 'point symmetry operation' ? ? 0.62349 -0.781831 0 0.781831 0.62349 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 4 A ASP 177 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc2 A OD1 ASP 6 A ASP 179 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc3 A OD2 ASP 6 A ASP 179 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? metalc ? metalc4 A OD2 ASP 6 A ASP 179 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 A OD1 ASP 8 A ASP 181 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc6 A OD2 ASP 8 A ASP 181 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc7 A O ILE 10 A ILE 183 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc8 A OE2 GLU 15 A GLU 188 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc9 A OE1 GLU 15 A GLU 188 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc10 A OE2 GLU 15 A GLU 188 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc11 A O SER 49 A SER 222 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc12 A O LYS 52 A LYS 225 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc13 A OD2 ASP 62 A ASP 235 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3J9C _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 801 736 CA CA . C 2 CA A 1 802 737 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.227 _atom_site.Cartn_y 20.361 _atom_site.Cartn_z -71.624 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #