data_3JQK # _model_server_result.job_id '_DNp6ksZgM2MeornzqHoZw' _model_server_result.datetime_utc '2024-11-24 06:46:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jqk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":158}' # _entry.id 3JQK # _exptl.entry_id 3JQK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3JQK _cell.length_a 106.573 _cell.length_b 106.573 _cell.length_c 59.251 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JQK _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 250 n n P O2 PO4 sing 251 n n P O3 PO4 sing 252 n n P O4 PO4 sing 253 n n # _atom_sites.entry_id 3JQK _atom_sites.fract_transf_matrix[1][1] 0.009383 _atom_sites.fract_transf_matrix[1][2] 0.005417 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016877 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 158 1 PO4 PO4 . C 3 ACT A 1 159 2 ACT ACT . D 3 ACT A 1 160 3 ACT ACT . E 4 HOH A 1 201 201 HOH HOH . E 4 HOH A 2 202 202 HOH HOH . E 4 HOH A 3 203 203 HOH HOH . E 4 HOH A 4 204 204 HOH HOH . E 4 HOH A 5 205 205 HOH HOH . E 4 HOH A 6 206 206 HOH HOH . E 4 HOH A 7 207 207 HOH HOH . E 4 HOH A 8 208 208 HOH HOH . E 4 HOH A 9 209 209 HOH HOH . E 4 HOH A 10 210 210 HOH HOH . E 4 HOH A 11 211 211 HOH HOH . E 4 HOH A 12 212 212 HOH HOH . E 4 HOH A 13 213 213 HOH HOH . E 4 HOH A 14 214 214 HOH HOH . E 4 HOH A 15 215 215 HOH HOH . E 4 HOH A 16 216 216 HOH HOH . E 4 HOH A 17 217 217 HOH HOH . E 4 HOH A 18 218 218 HOH HOH . E 4 HOH A 19 219 219 HOH HOH . E 4 HOH A 20 220 220 HOH HOH . E 4 HOH A 21 221 221 HOH HOH . E 4 HOH A 22 222 222 HOH HOH . E 4 HOH A 23 223 223 HOH HOH . E 4 HOH A 24 224 224 HOH HOH . E 4 HOH A 25 225 225 HOH HOH . E 4 HOH A 26 226 226 HOH HOH . E 4 HOH A 27 227 227 HOH HOH . E 4 HOH A 28 228 228 HOH HOH . E 4 HOH A 29 229 229 HOH HOH . E 4 HOH A 30 230 230 HOH HOH . E 4 HOH A 31 231 231 HOH HOH . E 4 HOH A 32 232 232 HOH HOH . E 4 HOH A 33 233 233 HOH HOH . E 4 HOH A 34 234 234 HOH HOH . E 4 HOH A 35 235 235 HOH HOH . E 4 HOH A 36 236 236 HOH HOH . E 4 HOH A 37 237 237 HOH HOH . E 4 HOH A 38 238 238 HOH HOH . E 4 HOH A 39 239 239 HOH HOH . E 4 HOH A 40 240 240 HOH HOH . E 4 HOH A 41 241 241 HOH HOH . E 4 HOH A 42 242 242 HOH HOH . E 4 HOH A 43 243 243 HOH HOH . E 4 HOH A 44 244 244 HOH HOH . E 4 HOH A 45 245 245 HOH HOH . E 4 HOH A 46 246 246 HOH HOH . E 4 HOH A 47 247 247 HOH HOH . E 4 HOH A 48 248 248 HOH HOH . E 4 HOH A 49 249 249 HOH HOH . E 4 HOH A 50 250 250 HOH HOH . E 4 HOH A 51 251 251 HOH HOH . E 4 HOH A 52 252 252 HOH HOH . E 4 HOH A 53 253 253 HOH HOH . E 4 HOH A 54 254 254 HOH HOH . E 4 HOH A 55 255 255 HOH HOH . E 4 HOH A 56 256 256 HOH HOH . E 4 HOH A 57 257 257 HOH HOH . E 4 HOH A 58 258 258 HOH HOH . E 4 HOH A 59 259 259 HOH HOH . E 4 HOH A 60 260 260 HOH HOH . E 4 HOH A 61 261 261 HOH HOH . E 4 HOH A 62 262 262 HOH HOH . E 4 HOH A 63 263 263 HOH HOH . E 4 HOH A 64 264 264 HOH HOH . E 4 HOH A 65 265 265 HOH HOH . E 4 HOH A 66 266 266 HOH HOH . E 4 HOH A 67 267 267 HOH HOH . E 4 HOH A 68 268 268 HOH HOH . E 4 HOH A 69 269 269 HOH HOH . E 4 HOH A 70 270 270 HOH HOH . E 4 HOH A 71 271 271 HOH HOH . E 4 HOH A 72 272 272 HOH HOH . E 4 HOH A 73 273 273 HOH HOH . E 4 HOH A 74 274 274 HOH HOH . E 4 HOH A 75 275 275 HOH HOH . E 4 HOH A 76 276 276 HOH HOH . E 4 HOH A 77 277 277 HOH HOH . E 4 HOH A 78 278 278 HOH HOH . E 4 HOH A 79 279 279 HOH HOH . E 4 HOH A 80 280 280 HOH HOH . E 4 HOH A 81 281 281 HOH HOH . E 4 HOH A 82 282 282 HOH HOH . E 4 HOH A 83 283 283 HOH HOH . E 4 HOH A 84 284 284 HOH HOH . E 4 HOH A 85 285 285 HOH HOH . E 4 HOH A 86 286 286 HOH HOH . E 4 HOH A 87 287 287 HOH HOH . E 4 HOH A 88 288 288 HOH HOH . E 4 HOH A 89 289 289 HOH HOH . E 4 HOH A 90 290 290 HOH HOH . E 4 HOH A 91 291 291 HOH HOH . E 4 HOH A 92 292 292 HOH HOH . E 4 HOH A 93 293 293 HOH HOH . E 4 HOH A 94 294 294 HOH HOH . E 4 HOH A 95 295 295 HOH HOH . E 4 HOH A 96 296 296 HOH HOH . E 4 HOH A 97 297 297 HOH HOH . E 4 HOH A 98 298 298 HOH HOH . E 4 HOH A 99 299 299 HOH HOH . E 4 HOH A 100 300 300 HOH HOH . E 4 HOH A 101 301 301 HOH HOH . E 4 HOH A 102 302 302 HOH HOH . E 4 HOH A 103 303 303 HOH HOH . E 4 HOH A 104 304 304 HOH HOH . E 4 HOH A 105 305 305 HOH HOH . E 4 HOH A 106 306 306 HOH HOH . E 4 HOH A 107 307 307 HOH HOH . E 4 HOH A 108 308 308 HOH HOH . E 4 HOH A 109 309 309 HOH HOH . E 4 HOH A 110 310 310 HOH HOH . E 4 HOH A 111 311 311 HOH HOH . E 4 HOH A 112 312 312 HOH HOH . E 4 HOH A 113 313 313 HOH HOH . E 4 HOH A 114 314 314 HOH HOH . E 4 HOH A 115 315 315 HOH HOH . E 4 HOH A 116 316 316 HOH HOH . E 4 HOH A 117 317 317 HOH HOH . E 4 HOH A 118 318 318 HOH HOH . E 4 HOH A 119 319 319 HOH HOH . E 4 HOH A 120 320 320 HOH HOH . E 4 HOH A 121 321 321 HOH HOH . E 4 HOH A 122 322 322 HOH HOH . E 4 HOH A 123 323 323 HOH HOH . E 4 HOH A 124 324 324 HOH HOH . E 4 HOH A 125 325 325 HOH HOH . E 4 HOH A 126 326 326 HOH HOH . E 4 HOH A 127 327 327 HOH HOH . E 4 HOH A 128 328 328 HOH HOH . E 4 HOH A 129 329 329 HOH HOH . E 4 HOH A 130 330 330 HOH HOH . E 4 HOH A 131 331 331 HOH HOH . E 4 HOH A 132 332 332 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 12.111 7.449 -13.073 1 19.96 ? P PO4 158 A 1 HETATM 2 O O1 PO4 . . . B 2 13.163 6.637 -13.603 1 19.07 ? O1 PO4 158 A 1 HETATM 3 O O2 PO4 . . . B 2 12.169 7.5 -11.618 1 20.18 ? O2 PO4 158 A 1 HETATM 4 O O3 PO4 . . . B 2 10.806 6.957 -13.476 1 16.84 ? O3 PO4 158 A 1 HETATM 5 O O4 PO4 . . . B 2 12.251 8.789 -13.546 1 21.14 ? O4 PO4 158 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #