data_3JSF # _model_server_result.job_id tu8DU66W-IbigHmZY7yJgg _model_server_result.datetime_utc '2025-08-31 10:55:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jsf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":123}' # _entry.id 3JSF # _exptl.entry_id 3JSF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 253.271 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-(2-fluorobenzyl)quinolin-8-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JSF _cell.length_a 67.649 _cell.length_b 67.621 _cell.length_c 88.584 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JSF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N PRO 1 A PRO 1 1_555 D CAB XV1 . A XV1 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale2 B N PRO 1 B PRO 1 1_555 G CAB XV1 . B XV1 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale3 C N PRO 1 C PRO 1 1_555 H CAB XV1 . C XV1 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.471 ? # _chem_comp.formula 'C16 H12 F N O' _chem_comp.formula_weight 253.271 _chem_comp.id XV1 _chem_comp.mon_nstd_flag . _chem_comp.name 7-(2-fluorobenzyl)quinolin-8-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAB XV1 sing 380 n n CAA CAC XV1 doub 381 n y CAA CAF XV1 sing 382 n y CAB CAD XV1 sing 383 n n CAC CAE XV1 sing 384 n y CAC OAK XV1 sing 385 n n CAD CAH XV1 doub 386 n y CAD CAL XV1 sing 387 n y CAE NAG XV1 doub 388 n y CAE CAI XV1 sing 389 n y CAF CAJ XV1 doub 390 n y NAG CAM XV1 sing 391 n y CAH CAN XV1 sing 392 n y CAI CAJ XV1 sing 393 n y CAI CAO XV1 doub 394 n y CAL CAP XV1 doub 395 n y CAL FAS XV1 sing 396 n n CAM CAQ XV1 doub 397 n y CAN CAR XV1 doub 398 n y CAO CAQ XV1 sing 399 n y CAP CAR XV1 sing 400 n y CAB HAB XV1 sing 401 n n CAB HABA XV1 sing 402 n n CAF HAF XV1 sing 403 n n CAH HAH XV1 sing 404 n n CAJ HAJ XV1 sing 405 n n OAK HOAK XV1 sing 406 n n CAM HAM XV1 sing 407 n n CAN HAN XV1 sing 408 n n CAO HAO XV1 sing 409 n n CAP HAP XV1 sing 410 n n CAQ HAQ XV1 sing 411 n n CAR HAR XV1 sing 412 n n # _atom_sites.entry_id 3JSF _atom_sites.fract_transf_matrix[1][1] 0.014782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 XV1 A 1 123 123 XV1 XV1 . E 3 SO4 B 1 124 124 SO4 SO4 . F 3 SO4 B 1 125 125 SO4 SO4 . G 2 XV1 B 1 123 123 XV1 XV1 . H 2 XV1 C 1 123 123 XV1 XV1 . I 4 HOH A 1 124 124 HOH HOH . I 4 HOH A 2 125 125 HOH HOH . I 4 HOH A 3 126 126 HOH HOH . I 4 HOH A 4 127 127 HOH HOH . I 4 HOH A 5 128 128 HOH HOH . I 4 HOH A 6 129 129 HOH HOH . I 4 HOH A 7 130 130 HOH HOH . I 4 HOH A 8 131 131 HOH HOH . I 4 HOH A 9 132 132 HOH HOH . I 4 HOH A 10 133 133 HOH HOH . I 4 HOH A 11 134 134 HOH HOH . I 4 HOH A 12 135 135 HOH HOH . I 4 HOH A 13 136 136 HOH HOH . I 4 HOH A 14 137 137 HOH HOH . I 4 HOH A 15 138 138 HOH HOH . I 4 HOH A 16 139 139 HOH HOH . I 4 HOH A 17 140 140 HOH HOH . I 4 HOH A 18 141 141 HOH HOH . I 4 HOH A 19 142 142 HOH HOH . I 4 HOH A 20 143 143 HOH HOH . I 4 HOH A 21 144 144 HOH HOH . I 4 HOH A 22 145 145 HOH HOH . I 4 HOH A 23 146 146 HOH HOH . I 4 HOH A 24 147 147 HOH HOH . I 4 HOH A 25 148 148 HOH HOH . I 4 HOH A 26 149 149 HOH HOH . I 4 HOH A 27 150 150 HOH HOH . I 4 HOH A 28 151 151 HOH HOH . I 4 HOH A 29 152 152 HOH HOH . I 4 HOH A 30 153 153 HOH HOH . I 4 HOH A 31 154 154 HOH HOH . I 4 HOH A 32 155 155 HOH HOH . I 4 HOH A 33 156 156 HOH HOH . I 4 HOH A 34 157 157 HOH HOH . I 4 HOH A 35 158 158 HOH HOH . I 4 HOH A 36 159 159 HOH HOH . I 4 HOH A 37 160 160 HOH HOH . I 4 HOH A 38 161 161 HOH HOH . I 4 HOH A 39 162 162 HOH HOH . I 4 HOH A 40 163 163 HOH HOH . I 4 HOH A 41 164 164 HOH HOH . I 4 HOH A 42 165 165 HOH HOH . I 4 HOH A 43 166 166 HOH HOH . I 4 HOH A 44 167 167 HOH HOH . I 4 HOH A 45 168 168 HOH HOH . J 4 HOH B 1 126 126 HOH HOH . J 4 HOH B 2 127 127 HOH HOH . J 4 HOH B 3 128 128 HOH HOH . J 4 HOH B 4 129 129 HOH HOH . J 4 HOH B 5 130 130 HOH HOH . J 4 HOH B 6 131 131 HOH HOH . J 4 HOH B 7 132 132 HOH HOH . J 4 HOH B 8 133 133 HOH HOH . J 4 HOH B 9 134 134 HOH HOH . J 4 HOH B 10 135 135 HOH HOH . J 4 HOH B 11 136 136 HOH HOH . J 4 HOH B 12 137 137 HOH HOH . J 4 HOH B 13 138 138 HOH HOH . J 4 HOH B 14 139 139 HOH HOH . J 4 HOH B 15 140 140 HOH HOH . J 4 HOH B 16 141 141 HOH HOH . J 4 HOH B 17 142 142 HOH HOH . J 4 HOH B 18 143 143 HOH HOH . J 4 HOH B 19 144 144 HOH HOH . J 4 HOH B 20 145 145 HOH HOH . J 4 HOH B 21 146 146 HOH HOH . J 4 HOH B 22 147 147 HOH HOH . J 4 HOH B 23 148 148 HOH HOH . J 4 HOH B 24 149 149 HOH HOH . J 4 HOH B 25 150 150 HOH HOH . J 4 HOH B 26 151 151 HOH HOH . J 4 HOH B 27 152 152 HOH HOH . J 4 HOH B 28 153 153 HOH HOH . J 4 HOH B 29 154 154 HOH HOH . J 4 HOH B 30 155 155 HOH HOH . J 4 HOH B 31 156 156 HOH HOH . J 4 HOH B 32 157 157 HOH HOH . J 4 HOH B 33 158 158 HOH HOH . J 4 HOH B 34 159 159 HOH HOH . J 4 HOH B 35 160 160 HOH HOH . J 4 HOH B 36 161 161 HOH HOH . J 4 HOH B 37 162 162 HOH HOH . J 4 HOH B 38 163 163 HOH HOH . J 4 HOH B 39 164 164 HOH HOH . J 4 HOH B 40 165 165 HOH HOH . J 4 HOH B 41 166 166 HOH HOH . J 4 HOH B 42 167 167 HOH HOH . J 4 HOH B 43 168 168 HOH HOH . J 4 HOH B 44 169 169 HOH HOH . J 4 HOH B 45 170 170 HOH HOH . J 4 HOH B 46 171 171 HOH HOH . J 4 HOH B 47 172 172 HOH HOH . J 4 HOH B 48 173 173 HOH HOH . J 4 HOH B 49 174 174 HOH HOH . J 4 HOH B 50 175 175 HOH HOH . J 4 HOH B 51 176 176 HOH HOH . J 4 HOH B 52 177 177 HOH HOH . J 4 HOH B 53 178 178 HOH HOH . J 4 HOH B 54 179 179 HOH HOH . J 4 HOH B 55 180 180 HOH HOH . J 4 HOH B 56 181 181 HOH HOH . J 4 HOH B 57 182 182 HOH HOH . J 4 HOH B 58 183 183 HOH HOH . J 4 HOH B 59 184 184 HOH HOH . J 4 HOH B 60 185 185 HOH HOH . J 4 HOH B 61 186 186 HOH HOH . J 4 HOH B 62 187 187 HOH HOH . J 4 HOH B 63 188 188 HOH HOH . J 4 HOH B 64 189 189 HOH HOH . J 4 HOH B 65 190 190 HOH HOH . K 4 HOH C 1 124 124 HOH HOH . K 4 HOH C 2 125 125 HOH HOH . K 4 HOH C 3 126 126 HOH HOH . K 4 HOH C 4 127 127 HOH HOH . K 4 HOH C 5 128 128 HOH HOH . K 4 HOH C 6 129 129 HOH HOH . K 4 HOH C 7 130 130 HOH HOH . K 4 HOH C 8 131 131 HOH HOH . K 4 HOH C 9 132 132 HOH HOH . K 4 HOH C 10 133 133 HOH HOH . K 4 HOH C 11 134 134 HOH HOH . K 4 HOH C 12 135 135 HOH HOH . K 4 HOH C 13 136 136 HOH HOH . K 4 HOH C 14 137 137 HOH HOH . K 4 HOH C 15 138 138 HOH HOH . K 4 HOH C 16 139 139 HOH HOH . K 4 HOH C 17 140 140 HOH HOH . K 4 HOH C 18 141 141 HOH HOH . K 4 HOH C 19 142 142 HOH HOH . K 4 HOH C 20 143 143 HOH HOH . K 4 HOH C 21 144 144 HOH HOH . K 4 HOH C 22 145 145 HOH HOH . K 4 HOH C 23 146 146 HOH HOH . K 4 HOH C 24 147 147 HOH HOH . K 4 HOH C 25 148 148 HOH HOH . K 4 HOH C 26 149 149 HOH HOH . K 4 HOH C 27 150 150 HOH HOH . K 4 HOH C 28 151 151 HOH HOH . K 4 HOH C 29 152 152 HOH HOH . K 4 HOH C 30 153 153 HOH HOH . K 4 HOH C 31 154 154 HOH HOH . K 4 HOH C 32 155 155 HOH HOH . K 4 HOH C 33 156 156 HOH HOH . K 4 HOH C 34 157 157 HOH HOH . K 4 HOH C 35 158 158 HOH HOH . K 4 HOH C 36 159 159 HOH HOH . K 4 HOH C 37 160 160 HOH HOH . K 4 HOH C 38 161 161 HOH HOH . K 4 HOH C 39 162 162 HOH HOH . K 4 HOH C 40 163 163 HOH HOH . K 4 HOH C 41 164 164 HOH HOH . K 4 HOH C 42 165 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA XV1 . . . D 2 14.471 -37.163 -23.585 1 35.42 ? CAA XV1 123 A 1 HETATM 2 C CAB XV1 . . . D 2 13.261 -36.832 -22.702 1 36.41 ? CAB XV1 123 A 1 HETATM 3 C CAC XV1 . . . D 2 14.781 -36.423 -24.726 1 37.04 ? CAC XV1 123 A 1 HETATM 4 C CAD XV1 . . . D 2 13.675 -35.963 -21.515 1 36.3 ? CAD XV1 123 A 1 HETATM 5 C CAE XV1 . . . D 2 15.906 -36.748 -25.481 1 37.63 ? CAE XV1 123 A 1 HETATM 6 C CAF XV1 . . . D 2 15.29 -38.221 -23.206 1 37.75 ? CAF XV1 123 A 1 HETATM 7 N NAG XV1 . . . D 2 16.211 -36.034 -26.576 1 38.83 ? NAG XV1 123 A 1 HETATM 8 C CAH XV1 . . . D 2 13.612 -36.497 -20.229 1 38.15 ? CAH XV1 123 A 1 HETATM 9 C CAI XV1 . . . D 2 16.723 -37.808 -25.095 1 37.42 ? CAI XV1 123 A 1 HETATM 10 C CAJ XV1 . . . D 2 16.417 -38.547 -23.955 1 37.21 ? CAJ XV1 123 A 1 HETATM 11 O OAK XV1 . . . D 2 14.01 -35.371 -25.108 1 36.54 ? OAK XV1 123 A 1 HETATM 12 C CAL XV1 . . . D 2 14.163 -34.669 -21.697 1 36.6 ? CAL XV1 123 A 1 HETATM 13 C CAM XV1 . . . D 2 17.275 -36.296 -27.317 1 37.57 ? CAM XV1 123 A 1 HETATM 14 C CAN XV1 . . . D 2 14.037 -35.752 -19.135 1 37.95 ? CAN XV1 123 A 1 HETATM 15 C CAO XV1 . . . D 2 17.849 -38.106 -25.853 1 39.09 ? CAO XV1 123 A 1 HETATM 16 C CAP XV1 . . . D 2 14.59 -33.923 -20.602 1 37.52 ? CAP XV1 123 A 1 HETATM 17 C CAQ XV1 . . . D 2 18.132 -37.34 -26.98 1 38.36 ? CAQ XV1 123 A 1 HETATM 18 C CAR XV1 . . . D 2 14.528 -34.461 -19.321 1 37.67 ? CAR XV1 123 A 1 HETATM 19 F FAS XV1 . . . D 2 14.22 -34.133 -22.931 1 40.18 ? FAS XV1 123 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #