data_3JU2
#
_model_server_result.job_id            UidgG-3JcNZvQjnBBc22RQ 
_model_server_result.datetime_utc      '2024-10-19 05:27:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ju2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":284}' 
#
_entry.id    3JU2 
#
_exptl.entry_id    3JU2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3JU2 
_cell.length_a            92.102 
_cell.length_b            92.102 
_cell.length_c            157.345 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3JU2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -46.051 79.762672 -26.224167 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 143 A GLU 141 1_555 D ZN ZN . A ZN 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc2 A OD2 ASP 178 A ASP 176 1_555 D ZN ZN . A ZN 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc3 A ND1 HIS 205 A HIS 203 1_555 D ZN ZN . A ZN 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc4 A OE1 GLU 249 A GLU 247 1_555 D ZN ZN . A ZN 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3JU2 
_atom_sites.fract_transf_matrix[1][1]    0.010858 
_atom_sites.fract_transf_matrix[1][2]    0.006269 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012537 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006355 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 283 1 GOL GOL . 
C 2 GOL A 1 284 1 GOL GOL . 
D 3 ZN A 1 285 1 ZN ZN . 
E 2 GOL A 1 286 1 GOL GOL . 
F 4 HOH A 1 287 2 HOH HOH . 
F 4 HOH A 2 288 3 HOH HOH . 
F 4 HOH A 3 289 4 HOH HOH . 
F 4 HOH A 4 290 5 HOH HOH . 
F 4 HOH A 5 291 6 HOH HOH . 
F 4 HOH A 6 292 7 HOH HOH . 
F 4 HOH A 7 293 8 HOH HOH . 
F 4 HOH A 8 294 9 HOH HOH . 
F 4 HOH A 9 295 10 HOH HOH . 
F 4 HOH A 10 296 11 HOH HOH . 
F 4 HOH A 11 297 12 HOH HOH . 
F 4 HOH A 12 298 13 HOH HOH . 
F 4 HOH A 13 299 14 HOH HOH . 
F 4 HOH A 14 300 15 HOH HOH . 
F 4 HOH A 15 301 16 HOH HOH . 
F 4 HOH A 16 302 17 HOH HOH . 
F 4 HOH A 17 303 18 HOH HOH . 
F 4 HOH A 18 304 19 HOH HOH . 
F 4 HOH A 19 305 20 HOH HOH . 
F 4 HOH A 20 306 21 HOH HOH . 
F 4 HOH A 21 307 22 HOH HOH . 
F 4 HOH A 22 308 23 HOH HOH . 
F 4 HOH A 23 309 24 HOH HOH . 
F 4 HOH A 24 310 25 HOH HOH . 
F 4 HOH A 25 311 26 HOH HOH . 
F 4 HOH A 26 312 28 HOH HOH . 
F 4 HOH A 27 313 30 HOH HOH . 
F 4 HOH A 28 314 31 HOH HOH . 
F 4 HOH A 29 315 32 HOH HOH . 
F 4 HOH A 30 316 33 HOH HOH . 
F 4 HOH A 31 317 34 HOH HOH . 
F 4 HOH A 32 318 35 HOH HOH . 
F 4 HOH A 33 319 36 HOH HOH . 
F 4 HOH A 34 320 37 HOH HOH . 
F 4 HOH A 35 321 38 HOH HOH . 
F 4 HOH A 36 322 39 HOH HOH . 
F 4 HOH A 37 323 40 HOH HOH . 
F 4 HOH A 38 324 42 HOH HOH . 
F 4 HOH A 39 325 44 HOH HOH . 
F 4 HOH A 40 326 45 HOH HOH . 
F 4 HOH A 41 327 46 HOH HOH . 
F 4 HOH A 42 328 47 HOH HOH . 
F 4 HOH A 43 329 48 HOH HOH . 
F 4 HOH A 44 330 49 HOH HOH . 
F 4 HOH A 45 331 50 HOH HOH . 
F 4 HOH A 46 332 52 HOH HOH . 
F 4 HOH A 47 333 53 HOH HOH . 
F 4 HOH A 48 334 54 HOH HOH . 
F 4 HOH A 49 335 55 HOH HOH . 
F 4 HOH A 50 336 56 HOH HOH . 
F 4 HOH A 51 337 57 HOH HOH . 
F 4 HOH A 52 338 58 HOH HOH . 
F 4 HOH A 53 339 59 HOH HOH . 
F 4 HOH A 54 340 60 HOH HOH . 
F 4 HOH A 55 341 61 HOH HOH . 
F 4 HOH A 56 342 62 HOH HOH . 
F 4 HOH A 57 343 63 HOH HOH . 
F 4 HOH A 58 344 64 HOH HOH . 
F 4 HOH A 59 345 65 HOH HOH . 
F 4 HOH A 60 346 66 HOH HOH . 
F 4 HOH A 61 347 67 HOH HOH . 
F 4 HOH A 62 348 68 HOH HOH . 
F 4 HOH A 63 349 70 HOH HOH . 
F 4 HOH A 64 350 71 HOH HOH . 
F 4 HOH A 65 351 72 HOH HOH . 
F 4 HOH A 66 352 73 HOH HOH . 
F 4 HOH A 67 353 75 HOH HOH . 
F 4 HOH A 68 354 77 HOH HOH . 
F 4 HOH A 69 355 78 HOH HOH . 
F 4 HOH A 70 356 79 HOH HOH . 
F 4 HOH A 71 357 80 HOH HOH . 
F 4 HOH A 72 358 81 HOH HOH . 
F 4 HOH A 73 359 84 HOH HOH . 
F 4 HOH A 74 360 86 HOH HOH . 
F 4 HOH A 75 361 87 HOH HOH . 
F 4 HOH A 76 362 88 HOH HOH . 
F 4 HOH A 77 363 89 HOH HOH . 
F 4 HOH A 78 364 90 HOH HOH . 
F 4 HOH A 79 365 91 HOH HOH . 
F 4 HOH A 80 366 92 HOH HOH . 
F 4 HOH A 81 367 93 HOH HOH . 
F 4 HOH A 82 368 94 HOH HOH . 
F 4 HOH A 83 369 96 HOH HOH . 
F 4 HOH A 84 370 97 HOH HOH . 
F 4 HOH A 85 371 99 HOH HOH . 
F 4 HOH A 86 372 100 HOH HOH . 
F 4 HOH A 87 373 101 HOH HOH . 
F 4 HOH A 88 374 102 HOH HOH . 
F 4 HOH A 89 375 103 HOH HOH . 
F 4 HOH A 90 376 104 HOH HOH . 
F 4 HOH A 91 377 105 HOH HOH . 
F 4 HOH A 92 378 107 HOH HOH . 
F 4 HOH A 93 379 108 HOH HOH . 
F 4 HOH A 94 380 110 HOH HOH . 
F 4 HOH A 95 381 111 HOH HOH . 
F 4 HOH A 96 382 112 HOH HOH . 
F 4 HOH A 97 383 113 HOH HOH . 
F 4 HOH A 98 384 114 HOH HOH . 
F 4 HOH A 99 385 115 HOH HOH . 
F 4 HOH A 100 386 117 HOH HOH . 
F 4 HOH A 101 387 118 HOH HOH . 
F 4 HOH A 102 388 119 HOH HOH . 
F 4 HOH A 103 389 120 HOH HOH . 
F 4 HOH A 104 390 121 HOH HOH . 
F 4 HOH A 105 391 124 HOH HOH . 
F 4 HOH A 106 392 125 HOH HOH . 
F 4 HOH A 107 393 127 HOH HOH . 
F 4 HOH A 108 394 128 HOH HOH . 
F 4 HOH A 109 395 129 HOH HOH . 
F 4 HOH A 110 396 130 HOH HOH . 
F 4 HOH A 111 397 131 HOH HOH . 
F 4 HOH A 112 398 132 HOH HOH . 
F 4 HOH A 113 399 133 HOH HOH . 
F 4 HOH A 114 400 134 HOH HOH . 
F 4 HOH A 115 401 135 HOH HOH . 
F 4 HOH A 116 402 136 HOH HOH . 
F 4 HOH A 117 403 137 HOH HOH . 
F 4 HOH A 118 404 138 HOH HOH . 
F 4 HOH A 119 405 139 HOH HOH . 
F 4 HOH A 120 406 140 HOH HOH . 
F 4 HOH A 121 407 141 HOH HOH . 
F 4 HOH A 122 408 142 HOH HOH . 
F 4 HOH A 123 409 143 HOH HOH . 
F 4 HOH A 124 410 144 HOH HOH . 
F 4 HOH A 125 411 145 HOH HOH . 
F 4 HOH A 126 412 146 HOH HOH . 
F 4 HOH A 127 413 147 HOH HOH . 
F 4 HOH A 128 414 148 HOH HOH . 
F 4 HOH A 129 415 149 HOH HOH . 
F 4 HOH A 130 416 150 HOH HOH . 
F 4 HOH A 131 417 151 HOH HOH . 
F 4 HOH A 132 418 152 HOH HOH . 
F 4 HOH A 133 419 153 HOH HOH . 
F 4 HOH A 134 420 154 HOH HOH . 
F 4 HOH A 135 421 155 HOH HOH . 
F 4 HOH A 136 422 156 HOH HOH . 
F 4 HOH A 137 423 157 HOH HOH . 
F 4 HOH A 138 424 158 HOH HOH . 
F 4 HOH A 139 425 159 HOH HOH . 
F 4 HOH A 140 426 160 HOH HOH . 
F 4 HOH A 141 427 161 HOH HOH . 
F 4 HOH A 142 428 162 HOH HOH . 
F 4 HOH A 143 429 163 HOH HOH . 
F 4 HOH A 144 430 164 HOH HOH . 
F 4 HOH A 145 431 165 HOH HOH . 
F 4 HOH A 146 432 166 HOH HOH . 
F 4 HOH A 147 433 167 HOH HOH . 
F 4 HOH A 148 434 168 HOH HOH . 
F 4 HOH A 149 435 169 HOH HOH . 
F 4 HOH A 150 436 170 HOH HOH . 
F 4 HOH A 151 437 171 HOH HOH . 
F 4 HOH A 152 438 172 HOH HOH . 
F 4 HOH A 153 439 173 HOH HOH . 
F 4 HOH A 154 440 174 HOH HOH . 
F 4 HOH A 155 441 175 HOH HOH . 
F 4 HOH A 156 442 176 HOH HOH . 
F 4 HOH A 157 443 177 HOH HOH . 
F 4 HOH A 158 444 178 HOH HOH . 
F 4 HOH A 159 445 180 HOH HOH . 
F 4 HOH A 160 446 181 HOH HOH . 
F 4 HOH A 161 447 182 HOH HOH . 
F 4 HOH A 162 448 183 HOH HOH . 
F 4 HOH A 163 449 184 HOH HOH . 
F 4 HOH A 164 450 185 HOH HOH . 
F 4 HOH A 165 451 186 HOH HOH . 
F 4 HOH A 166 452 187 HOH HOH . 
F 4 HOH A 167 453 188 HOH HOH . 
F 4 HOH A 168 454 189 HOH HOH . 
F 4 HOH A 169 455 190 HOH HOH . 
F 4 HOH A 170 456 191 HOH HOH . 
F 4 HOH A 171 457 192 HOH HOH . 
F 4 HOH A 172 458 193 HOH HOH . 
F 4 HOH A 173 459 194 HOH HOH . 
F 4 HOH A 174 460 195 HOH HOH . 
F 4 HOH A 175 461 196 HOH HOH . 
F 4 HOH A 176 462 197 HOH HOH . 
F 4 HOH A 177 463 198 HOH HOH . 
F 4 HOH A 178 464 199 HOH HOH . 
F 4 HOH A 179 465 200 HOH HOH . 
F 4 HOH A 180 466 201 HOH HOH . 
F 4 HOH A 181 467 202 HOH HOH . 
F 4 HOH A 182 468 203 HOH HOH . 
F 4 HOH A 183 469 204 HOH HOH . 
F 4 HOH A 184 470 205 HOH HOH . 
F 4 HOH A 185 471 206 HOH HOH . 
F 4 HOH A 186 472 207 HOH HOH . 
F 4 HOH A 187 473 208 HOH HOH . 
F 4 HOH A 188 474 209 HOH HOH . 
F 4 HOH A 189 475 210 HOH HOH . 
F 4 HOH A 190 476 211 HOH HOH . 
F 4 HOH A 191 477 212 HOH HOH . 
F 4 HOH A 192 478 213 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -27.146 49.466 -4.644 1 61.05 ? C1 GOL 284 A 1 
HETATM 2 O O1 GOL . . . C 2 -27.987 50.457 -4.08 1 58.65 ? O1 GOL 284 A 1 
HETATM 3 C C2 GOL . . . C 2 -27.965 48.388 -5.344 1 58.94 ? C2 GOL 284 A 1 
HETATM 4 O O2 GOL . . . C 2 -28.891 48.994 -6.219 1 72.84 ? O2 GOL 284 A 1 
HETATM 5 C C3 GOL . . . C 2 -27.069 47.446 -6.151 1 55.48 ? C3 GOL 284 A 1 
HETATM 6 O O3 GOL . . . C 2 -26.515 46.413 -5.356 1 46.56 ? O3 GOL 284 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#