data_3JUB # _model_server_result.job_id a8eP0mLmcmr7q-ZvWSbVNw _model_server_result.datetime_utc '2024-12-03 11:55:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jub # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":156}' # _entry.id 3JUB # _exptl.entry_id 3JUB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JUB _cell.length_a 35.995 _cell.length_b 41.94 _cell.length_c 84.012 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JUB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 3JUB _atom_sites.fract_transf_matrix[1][1] 0.027782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 154 1 NO3 NO3 . C 2 NO3 A 1 155 2 NO3 NO3 . D 2 NO3 A 1 156 3 NO3 NO3 . E 2 NO3 A 1 157 4 NO3 NO3 . F 2 NO3 A 1 158 5 NO3 NO3 . G 3 HOH A 1 159 1 HOH HOH . G 3 HOH A 2 160 160 HOH HOH . G 3 HOH A 3 161 161 HOH HOH . G 3 HOH A 4 162 162 HOH HOH . G 3 HOH A 5 163 163 HOH HOH . G 3 HOH A 6 164 164 HOH HOH . G 3 HOH A 7 165 165 HOH HOH . G 3 HOH A 8 166 166 HOH HOH . G 3 HOH A 9 167 167 HOH HOH . G 3 HOH A 10 168 168 HOH HOH . G 3 HOH A 11 169 169 HOH HOH . G 3 HOH A 12 170 170 HOH HOH . G 3 HOH A 13 171 171 HOH HOH . G 3 HOH A 14 172 172 HOH HOH . G 3 HOH A 15 173 173 HOH HOH . G 3 HOH A 16 174 174 HOH HOH . G 3 HOH A 17 175 3 HOH HOH . G 3 HOH A 18 176 176 HOH HOH . G 3 HOH A 19 177 4 HOH HOH . G 3 HOH A 20 178 178 HOH HOH . G 3 HOH A 21 179 179 HOH HOH . G 3 HOH A 22 180 180 HOH HOH . G 3 HOH A 23 181 181 HOH HOH . G 3 HOH A 24 182 182 HOH HOH . G 3 HOH A 25 183 183 HOH HOH . G 3 HOH A 26 184 184 HOH HOH . G 3 HOH A 27 185 185 HOH HOH . G 3 HOH A 28 186 6 HOH HOH . G 3 HOH A 29 187 7 HOH HOH . G 3 HOH A 30 188 8 HOH HOH . G 3 HOH A 31 189 189 HOH HOH . G 3 HOH A 32 190 190 HOH HOH . G 3 HOH A 33 191 191 HOH HOH . G 3 HOH A 34 192 9 HOH HOH . G 3 HOH A 35 193 193 HOH HOH . G 3 HOH A 36 194 194 HOH HOH . G 3 HOH A 37 195 195 HOH HOH . G 3 HOH A 38 196 196 HOH HOH . G 3 HOH A 39 197 197 HOH HOH . G 3 HOH A 40 198 10 HOH HOH . G 3 HOH A 41 199 199 HOH HOH . G 3 HOH A 42 200 11 HOH HOH . G 3 HOH A 43 201 12 HOH HOH . G 3 HOH A 44 202 202 HOH HOH . G 3 HOH A 45 203 203 HOH HOH . G 3 HOH A 46 204 204 HOH HOH . G 3 HOH A 47 205 205 HOH HOH . G 3 HOH A 48 206 206 HOH HOH . G 3 HOH A 49 207 207 HOH HOH . G 3 HOH A 50 208 208 HOH HOH . G 3 HOH A 51 209 209 HOH HOH . G 3 HOH A 52 210 210 HOH HOH . G 3 HOH A 53 211 211 HOH HOH . G 3 HOH A 54 212 212 HOH HOH . G 3 HOH A 55 213 213 HOH HOH . G 3 HOH A 56 214 13 HOH HOH . G 3 HOH A 57 215 14 HOH HOH . G 3 HOH A 58 216 216 HOH HOH . G 3 HOH A 59 217 15 HOH HOH . G 3 HOH A 60 218 218 HOH HOH . G 3 HOH A 61 219 17 HOH HOH . G 3 HOH A 62 220 19 HOH HOH . G 3 HOH A 63 221 221 HOH HOH . G 3 HOH A 64 222 222 HOH HOH . G 3 HOH A 65 223 223 HOH HOH . G 3 HOH A 66 224 20 HOH HOH . G 3 HOH A 67 225 225 HOH HOH . G 3 HOH A 68 226 226 HOH HOH . G 3 HOH A 69 227 227 HOH HOH . G 3 HOH A 70 228 21 HOH HOH . G 3 HOH A 71 229 229 HOH HOH . G 3 HOH A 72 230 230 HOH HOH . G 3 HOH A 73 231 231 HOH HOH . G 3 HOH A 74 232 22 HOH HOH . G 3 HOH A 75 233 233 HOH HOH . G 3 HOH A 76 234 234 HOH HOH . G 3 HOH A 77 235 23 HOH HOH . G 3 HOH A 78 236 236 HOH HOH . G 3 HOH A 79 237 237 HOH HOH . G 3 HOH A 80 238 24 HOH HOH . G 3 HOH A 81 239 239 HOH HOH . G 3 HOH A 82 240 25 HOH HOH . G 3 HOH A 83 241 241 HOH HOH . G 3 HOH A 84 242 242 HOH HOH . G 3 HOH A 85 243 243 HOH HOH . G 3 HOH A 86 244 244 HOH HOH . G 3 HOH A 87 245 26 HOH HOH . G 3 HOH A 88 246 246 HOH HOH . G 3 HOH A 89 247 247 HOH HOH . G 3 HOH A 90 248 248 HOH HOH . G 3 HOH A 91 249 249 HOH HOH . G 3 HOH A 92 250 250 HOH HOH . G 3 HOH A 93 251 251 HOH HOH . G 3 HOH A 94 252 252 HOH HOH . G 3 HOH A 95 253 253 HOH HOH . G 3 HOH A 96 254 254 HOH HOH . G 3 HOH A 97 255 255 HOH HOH . G 3 HOH A 98 256 256 HOH HOH . G 3 HOH A 99 257 257 HOH HOH . G 3 HOH A 100 258 27 HOH HOH . G 3 HOH A 101 259 28 HOH HOH . G 3 HOH A 102 260 29 HOH HOH . G 3 HOH A 103 261 30 HOH HOH . G 3 HOH A 104 262 31 HOH HOH . G 3 HOH A 105 263 32 HOH HOH . G 3 HOH A 106 264 33 HOH HOH . G 3 HOH A 107 265 35 HOH HOH . G 3 HOH A 108 266 36 HOH HOH . G 3 HOH A 109 267 37 HOH HOH . G 3 HOH A 110 268 40 HOH HOH . G 3 HOH A 111 269 41 HOH HOH . G 3 HOH A 112 270 42 HOH HOH . G 3 HOH A 113 271 43 HOH HOH . G 3 HOH A 114 272 44 HOH HOH . G 3 HOH A 115 273 45 HOH HOH . G 3 HOH A 116 274 46 HOH HOH . G 3 HOH A 117 275 47 HOH HOH . G 3 HOH A 118 276 48 HOH HOH . G 3 HOH A 119 277 49 HOH HOH . G 3 HOH A 120 278 50 HOH HOH . G 3 HOH A 121 279 51 HOH HOH . G 3 HOH A 122 280 52 HOH HOH . G 3 HOH A 123 281 53 HOH HOH . G 3 HOH A 124 282 54 HOH HOH . G 3 HOH A 125 283 55 HOH HOH . G 3 HOH A 126 284 56 HOH HOH . G 3 HOH A 127 285 57 HOH HOH . G 3 HOH A 128 286 58 HOH HOH . G 3 HOH A 129 287 59 HOH HOH . G 3 HOH A 130 288 60 HOH HOH . G 3 HOH A 131 289 61 HOH HOH . G 3 HOH A 132 290 62 HOH HOH . G 3 HOH A 133 291 65 HOH HOH . G 3 HOH A 134 292 66 HOH HOH . G 3 HOH A 135 293 67 HOH HOH . G 3 HOH A 136 294 68 HOH HOH . G 3 HOH A 137 295 69 HOH HOH . G 3 HOH A 138 296 70 HOH HOH . G 3 HOH A 139 297 71 HOH HOH . G 3 HOH A 140 298 73 HOH HOH . G 3 HOH A 141 299 74 HOH HOH . G 3 HOH A 142 300 77 HOH HOH . G 3 HOH A 143 301 78 HOH HOH . G 3 HOH A 144 302 79 HOH HOH . G 3 HOH A 145 303 80 HOH HOH . G 3 HOH A 146 304 81 HOH HOH . G 3 HOH A 147 305 82 HOH HOH . G 3 HOH A 148 306 83 HOH HOH . G 3 HOH A 149 307 84 HOH HOH . G 3 HOH A 150 308 85 HOH HOH . G 3 HOH A 151 309 86 HOH HOH . G 3 HOH A 152 310 87 HOH HOH . G 3 HOH A 153 311 88 HOH HOH . G 3 HOH A 154 312 89 HOH HOH . G 3 HOH A 155 313 90 HOH HOH . G 3 HOH A 156 314 91 HOH HOH . G 3 HOH A 157 315 92 HOH HOH . G 3 HOH A 158 316 93 HOH HOH . G 3 HOH A 159 317 94 HOH HOH . G 3 HOH A 160 318 95 HOH HOH . G 3 HOH A 161 319 98 HOH HOH . G 3 HOH A 162 320 100 HOH HOH . G 3 HOH A 163 321 101 HOH HOH . G 3 HOH A 164 322 102 HOH HOH . G 3 HOH A 165 323 103 HOH HOH . G 3 HOH A 166 324 105 HOH HOH . G 3 HOH A 167 325 106 HOH HOH . G 3 HOH A 168 326 107 HOH HOH . G 3 HOH A 169 327 108 HOH HOH . G 3 HOH A 170 328 109 HOH HOH . G 3 HOH A 171 329 110 HOH HOH . G 3 HOH A 172 330 111 HOH HOH . G 3 HOH A 173 331 112 HOH HOH . G 3 HOH A 174 332 113 HOH HOH . G 3 HOH A 175 333 114 HOH HOH . G 3 HOH A 176 334 115 HOH HOH . G 3 HOH A 177 335 116 HOH HOH . G 3 HOH A 178 336 117 HOH HOH . G 3 HOH A 179 337 118 HOH HOH . G 3 HOH A 180 338 119 HOH HOH . G 3 HOH A 181 339 120 HOH HOH . G 3 HOH A 182 340 122 HOH HOH . G 3 HOH A 183 341 123 HOH HOH . G 3 HOH A 184 342 124 HOH HOH . G 3 HOH A 185 343 125 HOH HOH . G 3 HOH A 186 344 126 HOH HOH . G 3 HOH A 187 345 127 HOH HOH . G 3 HOH A 188 346 128 HOH HOH . G 3 HOH A 189 347 129 HOH HOH . G 3 HOH A 190 348 130 HOH HOH . G 3 HOH A 191 349 131 HOH HOH . G 3 HOH A 192 350 132 HOH HOH . G 3 HOH A 193 351 134 HOH HOH . G 3 HOH A 194 352 135 HOH HOH . G 3 HOH A 195 353 136 HOH HOH . G 3 HOH A 196 354 137 HOH HOH . G 3 HOH A 197 355 138 HOH HOH . G 3 HOH A 198 356 140 HOH HOH . G 3 HOH A 199 357 141 HOH HOH . G 3 HOH A 200 358 142 HOH HOH . G 3 HOH A 201 359 143 HOH HOH . G 3 HOH A 202 360 144 HOH HOH . G 3 HOH A 203 361 145 HOH HOH . G 3 HOH A 204 362 147 HOH HOH . G 3 HOH A 205 363 148 HOH HOH . G 3 HOH A 206 364 149 HOH HOH . G 3 HOH A 207 365 150 HOH HOH . G 3 HOH A 208 366 151 HOH HOH . G 3 HOH A 209 367 152 HOH HOH . G 3 HOH A 210 368 153 HOH HOH . G 3 HOH A 211 369 154 HOH HOH . G 3 HOH A 212 370 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . D 2 15.457 1.749 4.307 1 19.36 ? N NO3 156 A 1 HETATM 2 O O1 NO3 . . . D 2 15.81 2.126 3.071 1 23.35 ? O1 NO3 156 A 1 HETATM 3 O O2 NO3 . . . D 2 15.588 2.632 5.315 1 18.62 ? O2 NO3 156 A 1 HETATM 4 O O3 NO3 . . . D 2 15.037 0.58 4.652 1 18.12 ? O3 NO3 156 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #