data_3JUC # _model_server_result.job_id vhxWl54b1ajfnh02B9RIyA _model_server_result.datetime_utc '2024-11-22 18:46:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3juc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 3JUC # _exptl.entry_id 3JUC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 129.114 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PYROGLUTAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JUC _cell.length_a 36.247 _cell.length_b 42.478 _cell.length_c 84.814 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JUC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H7 N O3' _chem_comp.formula_weight 129.114 _chem_comp.id PCA _chem_comp.mon_nstd_flag n _chem_comp.name 'PYROGLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PCA sing 240 n n N CD PCA sing 241 n n N H PCA sing 242 n n CA CB PCA sing 243 n n CA C PCA sing 244 n n CA HA PCA sing 245 n n CB CG PCA sing 246 n n CB HB2 PCA sing 247 n n CB HB3 PCA sing 248 n n CG CD PCA sing 249 n n CG HG2 PCA sing 250 n n CG HG3 PCA sing 251 n n CD OE PCA doub 252 n n C O PCA doub 253 n n C OXT PCA sing 254 n n OXT HXT PCA sing 255 n n # _atom_sites.entry_id 3JUC _atom_sites.fract_transf_matrix[1][1] 0.027588 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PCA A 1 1001 1001 PCA PCA . C 3 NO3 A 1 154 1 NO3 NO3 . D 3 NO3 A 1 155 2 NO3 NO3 . E 4 HOH A 1 156 1 HOH HOH . E 4 HOH A 2 157 3 HOH HOH . E 4 HOH A 3 158 4 HOH HOH . E 4 HOH A 4 159 6 HOH HOH . E 4 HOH A 5 160 7 HOH HOH . E 4 HOH A 6 161 8 HOH HOH . E 4 HOH A 7 162 9 HOH HOH . E 4 HOH A 8 163 10 HOH HOH . E 4 HOH A 9 164 11 HOH HOH . E 4 HOH A 10 165 12 HOH HOH . E 4 HOH A 11 166 13 HOH HOH . E 4 HOH A 12 167 14 HOH HOH . E 4 HOH A 13 168 15 HOH HOH . E 4 HOH A 14 169 17 HOH HOH . E 4 HOH A 15 170 19 HOH HOH . E 4 HOH A 16 171 20 HOH HOH . E 4 HOH A 17 172 21 HOH HOH . E 4 HOH A 18 173 22 HOH HOH . E 4 HOH A 19 174 23 HOH HOH . E 4 HOH A 20 175 24 HOH HOH . E 4 HOH A 21 176 25 HOH HOH . E 4 HOH A 22 177 26 HOH HOH . E 4 HOH A 23 178 27 HOH HOH . E 4 HOH A 24 179 28 HOH HOH . E 4 HOH A 25 180 29 HOH HOH . E 4 HOH A 26 181 30 HOH HOH . E 4 HOH A 27 182 32 HOH HOH . E 4 HOH A 28 183 33 HOH HOH . E 4 HOH A 29 184 35 HOH HOH . E 4 HOH A 30 185 36 HOH HOH . E 4 HOH A 31 186 37 HOH HOH . E 4 HOH A 32 187 41 HOH HOH . E 4 HOH A 33 188 42 HOH HOH . E 4 HOH A 34 189 43 HOH HOH . E 4 HOH A 35 190 44 HOH HOH . E 4 HOH A 36 191 45 HOH HOH . E 4 HOH A 37 192 46 HOH HOH . E 4 HOH A 38 193 47 HOH HOH . E 4 HOH A 39 194 48 HOH HOH . E 4 HOH A 40 195 49 HOH HOH . E 4 HOH A 41 196 50 HOH HOH . E 4 HOH A 42 197 51 HOH HOH . E 4 HOH A 43 198 52 HOH HOH . E 4 HOH A 44 199 53 HOH HOH . E 4 HOH A 45 200 54 HOH HOH . E 4 HOH A 46 201 55 HOH HOH . E 4 HOH A 47 202 56 HOH HOH . E 4 HOH A 48 203 57 HOH HOH . E 4 HOH A 49 204 58 HOH HOH . E 4 HOH A 50 205 59 HOH HOH . E 4 HOH A 51 206 60 HOH HOH . E 4 HOH A 52 207 61 HOH HOH . E 4 HOH A 53 208 62 HOH HOH . E 4 HOH A 54 209 65 HOH HOH . E 4 HOH A 55 210 66 HOH HOH . E 4 HOH A 56 211 67 HOH HOH . E 4 HOH A 57 212 68 HOH HOH . E 4 HOH A 58 213 69 HOH HOH . E 4 HOH A 59 214 70 HOH HOH . E 4 HOH A 60 215 71 HOH HOH . E 4 HOH A 61 216 73 HOH HOH . E 4 HOH A 62 217 74 HOH HOH . E 4 HOH A 63 218 77 HOH HOH . E 4 HOH A 64 219 78 HOH HOH . E 4 HOH A 65 220 79 HOH HOH . E 4 HOH A 66 221 80 HOH HOH . E 4 HOH A 67 222 81 HOH HOH . E 4 HOH A 68 223 82 HOH HOH . E 4 HOH A 69 224 83 HOH HOH . E 4 HOH A 70 225 84 HOH HOH . E 4 HOH A 71 226 85 HOH HOH . E 4 HOH A 72 227 86 HOH HOH . E 4 HOH A 73 228 87 HOH HOH . E 4 HOH A 74 229 88 HOH HOH . E 4 HOH A 75 230 89 HOH HOH . E 4 HOH A 76 231 91 HOH HOH . E 4 HOH A 77 232 92 HOH HOH . E 4 HOH A 78 233 93 HOH HOH . E 4 HOH A 79 234 94 HOH HOH . E 4 HOH A 80 235 95 HOH HOH . E 4 HOH A 81 236 98 HOH HOH . E 4 HOH A 82 237 101 HOH HOH . E 4 HOH A 83 238 102 HOH HOH . E 4 HOH A 84 239 103 HOH HOH . E 4 HOH A 85 240 105 HOH HOH . E 4 HOH A 86 241 106 HOH HOH . E 4 HOH A 87 242 107 HOH HOH . E 4 HOH A 88 243 108 HOH HOH . E 4 HOH A 89 244 109 HOH HOH . E 4 HOH A 90 245 110 HOH HOH . E 4 HOH A 91 246 111 HOH HOH . E 4 HOH A 92 247 112 HOH HOH . E 4 HOH A 93 248 113 HOH HOH . E 4 HOH A 94 249 114 HOH HOH . E 4 HOH A 95 250 115 HOH HOH . E 4 HOH A 96 251 116 HOH HOH . E 4 HOH A 97 252 117 HOH HOH . E 4 HOH A 98 253 118 HOH HOH . E 4 HOH A 99 254 119 HOH HOH . E 4 HOH A 100 255 120 HOH HOH . E 4 HOH A 101 256 122 HOH HOH . E 4 HOH A 102 257 123 HOH HOH . E 4 HOH A 103 258 124 HOH HOH . E 4 HOH A 104 259 125 HOH HOH . E 4 HOH A 105 260 126 HOH HOH . E 4 HOH A 106 261 127 HOH HOH . E 4 HOH A 107 262 128 HOH HOH . E 4 HOH A 108 263 129 HOH HOH . E 4 HOH A 109 264 134 HOH HOH . E 4 HOH A 110 265 135 HOH HOH . E 4 HOH A 111 266 136 HOH HOH . E 4 HOH A 112 267 1 HOH HOH . E 4 HOH A 113 268 2 HOH HOH . E 4 HOH A 114 269 3 HOH HOH . E 4 HOH A 115 270 4 HOH HOH . E 4 HOH A 116 271 5 HOH HOH . E 4 HOH A 117 272 6 HOH HOH . E 4 HOH A 118 273 7 HOH HOH . E 4 HOH A 119 274 8 HOH HOH . E 4 HOH A 120 275 9 HOH HOH . E 4 HOH A 121 276 10 HOH HOH . E 4 HOH A 122 277 11 HOH HOH . E 4 HOH A 123 278 12 HOH HOH . E 4 HOH A 124 279 13 HOH HOH . E 4 HOH A 125 280 14 HOH HOH . E 4 HOH A 126 281 15 HOH HOH . E 4 HOH A 127 282 16 HOH HOH . E 4 HOH A 128 283 17 HOH HOH . E 4 HOH A 129 284 18 HOH HOH . E 4 HOH A 130 285 19 HOH HOH . E 4 HOH A 131 286 20 HOH HOH . E 4 HOH A 132 287 21 HOH HOH . E 4 HOH A 133 288 22 HOH HOH . E 4 HOH A 134 289 23 HOH HOH . E 4 HOH A 135 290 24 HOH HOH . E 4 HOH A 136 291 25 HOH HOH . E 4 HOH A 137 292 26 HOH HOH . E 4 HOH A 138 293 27 HOH HOH . E 4 HOH A 139 294 28 HOH HOH . E 4 HOH A 140 295 29 HOH HOH . E 4 HOH A 141 296 30 HOH HOH . E 4 HOH A 142 297 31 HOH HOH . E 4 HOH A 143 298 32 HOH HOH . E 4 HOH A 144 299 33 HOH HOH . E 4 HOH A 145 300 34 HOH HOH . E 4 HOH A 146 301 35 HOH HOH . E 4 HOH A 147 302 36 HOH HOH . E 4 HOH A 148 303 37 HOH HOH . E 4 HOH A 149 304 38 HOH HOH . E 4 HOH A 150 305 39 HOH HOH . E 4 HOH A 151 306 40 HOH HOH . E 4 HOH A 152 307 41 HOH HOH . E 4 HOH A 153 308 42 HOH HOH . E 4 HOH A 154 309 43 HOH HOH . E 4 HOH A 155 310 44 HOH HOH . E 4 HOH A 156 311 45 HOH HOH . E 4 HOH A 157 312 46 HOH HOH . E 4 HOH A 158 313 47 HOH HOH . E 4 HOH A 159 314 48 HOH HOH . E 4 HOH A 160 315 49 HOH HOH . E 4 HOH A 161 316 50 HOH HOH . E 4 HOH A 162 317 51 HOH HOH . E 4 HOH A 163 318 52 HOH HOH . E 4 HOH A 164 319 53 HOH HOH . E 4 HOH A 165 320 54 HOH HOH . E 4 HOH A 166 321 55 HOH HOH . E 4 HOH A 167 322 56 HOH HOH . E 4 HOH A 168 323 57 HOH HOH . E 4 HOH A 169 324 58 HOH HOH . E 4 HOH A 170 325 59 HOH HOH . E 4 HOH A 171 326 60 HOH HOH . E 4 HOH A 172 327 61 HOH HOH . E 4 HOH A 173 328 62 HOH HOH . E 4 HOH A 174 329 63 HOH HOH . E 4 HOH A 175 330 64 HOH HOH . E 4 HOH A 176 331 65 HOH HOH . E 4 HOH A 177 332 66 HOH HOH . E 4 HOH A 178 333 67 HOH HOH . E 4 HOH A 179 334 68 HOH HOH . E 4 HOH A 180 335 69 HOH HOH . E 4 HOH A 181 336 70 HOH HOH . E 4 HOH A 182 337 71 HOH HOH . E 4 HOH A 183 338 72 HOH HOH . E 4 HOH A 184 339 74 HOH HOH . E 4 HOH A 185 340 75 HOH HOH . E 4 HOH A 186 341 76 HOH HOH . E 4 HOH A 187 342 77 HOH HOH . E 4 HOH A 188 343 79 HOH HOH . E 4 HOH A 189 344 80 HOH HOH . E 4 HOH A 190 345 81 HOH HOH . E 4 HOH A 191 346 82 HOH HOH . E 4 HOH A 192 347 83 HOH HOH . E 4 HOH A 193 348 85 HOH HOH . E 4 HOH A 194 349 87 HOH HOH . E 4 HOH A 195 350 88 HOH HOH . E 4 HOH A 196 351 91 HOH HOH . E 4 HOH A 197 352 93 HOH HOH . E 4 HOH A 198 353 94 HOH HOH . E 4 HOH A 199 354 95 HOH HOH . E 4 HOH A 200 355 96 HOH HOH . E 4 HOH A 201 356 97 HOH HOH . E 4 HOH A 202 357 98 HOH HOH . E 4 HOH A 203 358 99 HOH HOH . E 4 HOH A 204 359 100 HOH HOH . E 4 HOH A 205 360 101 HOH HOH . E 4 HOH A 206 361 102 HOH HOH . E 4 HOH A 207 362 103 HOH HOH . E 4 HOH A 208 363 104 HOH HOH . E 4 HOH A 209 364 105 HOH HOH . E 4 HOH A 210 365 106 HOH HOH . E 4 HOH A 211 366 107 HOH HOH . E 4 HOH A 212 367 108 HOH HOH . E 4 HOH A 213 368 109 HOH HOH . E 4 HOH A 214 369 110 HOH HOH . E 4 HOH A 215 370 111 HOH HOH . E 4 HOH A 216 371 112 HOH HOH . E 4 HOH A 217 372 113 HOH HOH . E 4 HOH A 218 373 114 HOH HOH . E 4 HOH A 219 374 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PCA . . . B 2 -1.45 -0.998 13.7 1 10.13 ? N PCA 1001 A 1 HETATM 2 C CA PCA . . . B 2 -0.112 -0.833 13.161 1 8.05 ? CA PCA 1001 A 1 HETATM 3 C CB PCA . . . B 2 -0.262 -1.441 11.703 1 9.4 ? CB PCA 1001 A 1 HETATM 4 C CG PCA . . . B 2 -1.673 -1 11.321 1 9.92 ? CG PCA 1001 A 1 HETATM 5 C CD PCA . . . B 2 -2.373 -0.901 12.681 1 10.17 ? CD PCA 1001 A 1 HETATM 6 O OE PCA . . . B 2 -3.572 -0.741 12.892 1 10.36 ? OE PCA 1001 A 1 HETATM 7 C C PCA . . . B 2 0.308 0.611 13.145 1 7.31 ? C PCA 1001 A 1 HETATM 8 O O PCA . . . B 2 1.303 0.901 12.478 1 7.21 ? O PCA 1001 A 1 HETATM 9 O OXT PCA . . . B 2 -0.367 1.454 13.798 1 7.42 ? OXT PCA 1001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #