data_3JUD # _model_server_result.job_id M6iTRqdHHao5CwCr1HSgwg _model_server_result.datetime_utc '2024-11-08 04:41:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":154}' # _entry.id 3JUD # _exptl.entry_id 3JUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JUD _cell.length_a 36.307 _cell.length_b 42.443 _cell.length_c 84.764 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 3JUD _atom_sites.fract_transf_matrix[1][1] 0.027543 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023561 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 154 1 NO3 NO3 . C 2 NO3 A 1 155 2 NO3 NO3 . D 2 NO3 A 1 156 4 NO3 NO3 . E 3 HOH A 1 157 1 HOH HOH . E 3 HOH A 2 158 3 HOH HOH . E 3 HOH A 3 159 4 HOH HOH . E 3 HOH A 4 160 160 HOH HOH . E 3 HOH A 5 161 161 HOH HOH . E 3 HOH A 6 162 6 HOH HOH . E 3 HOH A 7 163 163 HOH HOH . E 3 HOH A 8 164 164 HOH HOH . E 3 HOH A 9 165 165 HOH HOH . E 3 HOH A 10 166 166 HOH HOH . E 3 HOH A 11 167 167 HOH HOH . E 3 HOH A 12 168 168 HOH HOH . E 3 HOH A 13 169 169 HOH HOH . E 3 HOH A 14 170 170 HOH HOH . E 3 HOH A 15 171 171 HOH HOH . E 3 HOH A 16 172 172 HOH HOH . E 3 HOH A 17 173 173 HOH HOH . E 3 HOH A 18 174 174 HOH HOH . E 3 HOH A 19 175 7 HOH HOH . E 3 HOH A 20 176 176 HOH HOH . E 3 HOH A 21 177 8 HOH HOH . E 3 HOH A 22 178 178 HOH HOH . E 3 HOH A 23 179 179 HOH HOH . E 3 HOH A 24 180 180 HOH HOH . E 3 HOH A 25 181 181 HOH HOH . E 3 HOH A 26 182 182 HOH HOH . E 3 HOH A 27 183 9 HOH HOH . E 3 HOH A 28 184 184 HOH HOH . E 3 HOH A 29 185 185 HOH HOH . E 3 HOH A 30 186 10 HOH HOH . E 3 HOH A 31 187 11 HOH HOH . E 3 HOH A 32 188 12 HOH HOH . E 3 HOH A 33 189 189 HOH HOH . E 3 HOH A 34 190 190 HOH HOH . E 3 HOH A 35 191 191 HOH HOH . E 3 HOH A 36 192 13 HOH HOH . E 3 HOH A 37 193 193 HOH HOH . E 3 HOH A 38 194 194 HOH HOH . E 3 HOH A 39 195 14 HOH HOH . E 3 HOH A 40 196 15 HOH HOH . E 3 HOH A 41 197 17 HOH HOH . E 3 HOH A 42 198 19 HOH HOH . E 3 HOH A 43 199 20 HOH HOH . E 3 HOH A 44 200 21 HOH HOH . E 3 HOH A 45 201 22 HOH HOH . E 3 HOH A 46 202 202 HOH HOH . E 3 HOH A 47 203 203 HOH HOH . E 3 HOH A 48 204 204 HOH HOH . E 3 HOH A 49 205 205 HOH HOH . E 3 HOH A 50 206 206 HOH HOH . E 3 HOH A 51 207 207 HOH HOH . E 3 HOH A 52 208 208 HOH HOH . E 3 HOH A 53 209 209 HOH HOH . E 3 HOH A 54 210 210 HOH HOH . E 3 HOH A 55 211 23 HOH HOH . E 3 HOH A 56 212 212 HOH HOH . E 3 HOH A 57 213 213 HOH HOH . E 3 HOH A 58 214 24 HOH HOH . E 3 HOH A 59 215 25 HOH HOH . E 3 HOH A 60 216 216 HOH HOH . E 3 HOH A 61 217 26 HOH HOH . E 3 HOH A 62 218 218 HOH HOH . E 3 HOH A 63 219 27 HOH HOH . E 3 HOH A 64 220 28 HOH HOH . E 3 HOH A 65 221 221 HOH HOH . E 3 HOH A 66 222 222 HOH HOH . E 3 HOH A 67 223 223 HOH HOH . E 3 HOH A 68 224 29 HOH HOH . E 3 HOH A 69 225 225 HOH HOH . E 3 HOH A 70 226 226 HOH HOH . E 3 HOH A 71 227 227 HOH HOH . E 3 HOH A 72 228 30 HOH HOH . E 3 HOH A 73 229 229 HOH HOH . E 3 HOH A 74 230 230 HOH HOH . E 3 HOH A 75 231 231 HOH HOH . E 3 HOH A 76 232 31 HOH HOH . E 3 HOH A 77 233 233 HOH HOH . E 3 HOH A 78 234 234 HOH HOH . E 3 HOH A 79 235 32 HOH HOH . E 3 HOH A 80 236 236 HOH HOH . E 3 HOH A 81 237 237 HOH HOH . E 3 HOH A 82 238 33 HOH HOH . E 3 HOH A 83 239 239 HOH HOH . E 3 HOH A 84 240 35 HOH HOH . E 3 HOH A 85 241 241 HOH HOH . E 3 HOH A 86 242 242 HOH HOH . E 3 HOH A 87 243 36 HOH HOH . E 3 HOH A 88 244 244 HOH HOH . E 3 HOH A 89 245 37 HOH HOH . E 3 HOH A 90 246 246 HOH HOH . E 3 HOH A 91 247 247 HOH HOH . E 3 HOH A 92 248 248 HOH HOH . E 3 HOH A 93 249 249 HOH HOH . E 3 HOH A 94 250 40 HOH HOH . E 3 HOH A 95 251 251 HOH HOH . E 3 HOH A 96 252 252 HOH HOH . E 3 HOH A 97 253 253 HOH HOH . E 3 HOH A 98 254 254 HOH HOH . E 3 HOH A 99 255 255 HOH HOH . E 3 HOH A 100 256 41 HOH HOH . E 3 HOH A 101 257 257 HOH HOH . E 3 HOH A 102 258 258 HOH HOH . E 3 HOH A 103 259 259 HOH HOH . E 3 HOH A 104 260 260 HOH HOH . E 3 HOH A 105 261 261 HOH HOH . E 3 HOH A 106 262 262 HOH HOH . E 3 HOH A 107 263 263 HOH HOH . E 3 HOH A 108 264 264 HOH HOH . E 3 HOH A 109 265 265 HOH HOH . E 3 HOH A 110 266 266 HOH HOH . E 3 HOH A 111 267 267 HOH HOH . E 3 HOH A 112 268 268 HOH HOH . E 3 HOH A 113 269 269 HOH HOH . E 3 HOH A 114 270 270 HOH HOH . E 3 HOH A 115 271 271 HOH HOH . E 3 HOH A 116 272 272 HOH HOH . E 3 HOH A 117 273 273 HOH HOH . E 3 HOH A 118 274 274 HOH HOH . E 3 HOH A 119 275 275 HOH HOH . E 3 HOH A 120 276 276 HOH HOH . E 3 HOH A 121 277 277 HOH HOH . E 3 HOH A 122 278 278 HOH HOH . E 3 HOH A 123 279 279 HOH HOH . E 3 HOH A 124 280 280 HOH HOH . E 3 HOH A 125 281 281 HOH HOH . E 3 HOH A 126 282 282 HOH HOH . E 3 HOH A 127 283 283 HOH HOH . E 3 HOH A 128 284 284 HOH HOH . E 3 HOH A 129 285 285 HOH HOH . E 3 HOH A 130 286 42 HOH HOH . E 3 HOH A 131 287 43 HOH HOH . E 3 HOH A 132 288 44 HOH HOH . E 3 HOH A 133 289 45 HOH HOH . E 3 HOH A 134 290 46 HOH HOH . E 3 HOH A 135 291 47 HOH HOH . E 3 HOH A 136 292 48 HOH HOH . E 3 HOH A 137 293 49 HOH HOH . E 3 HOH A 138 294 50 HOH HOH . E 3 HOH A 139 295 51 HOH HOH . E 3 HOH A 140 296 52 HOH HOH . E 3 HOH A 141 297 54 HOH HOH . E 3 HOH A 142 298 55 HOH HOH . E 3 HOH A 143 299 56 HOH HOH . E 3 HOH A 144 300 57 HOH HOH . E 3 HOH A 145 301 58 HOH HOH . E 3 HOH A 146 302 59 HOH HOH . E 3 HOH A 147 303 60 HOH HOH . E 3 HOH A 148 304 61 HOH HOH . E 3 HOH A 149 305 62 HOH HOH . E 3 HOH A 150 306 65 HOH HOH . E 3 HOH A 151 307 66 HOH HOH . E 3 HOH A 152 308 67 HOH HOH . E 3 HOH A 153 309 68 HOH HOH . E 3 HOH A 154 310 69 HOH HOH . E 3 HOH A 155 311 70 HOH HOH . E 3 HOH A 156 312 71 HOH HOH . E 3 HOH A 157 313 73 HOH HOH . E 3 HOH A 158 314 74 HOH HOH . E 3 HOH A 159 315 77 HOH HOH . E 3 HOH A 160 316 78 HOH HOH . E 3 HOH A 161 317 79 HOH HOH . E 3 HOH A 162 318 81 HOH HOH . E 3 HOH A 163 319 82 HOH HOH . E 3 HOH A 164 320 83 HOH HOH . E 3 HOH A 165 321 84 HOH HOH . E 3 HOH A 166 322 85 HOH HOH . E 3 HOH A 167 323 86 HOH HOH . E 3 HOH A 168 324 87 HOH HOH . E 3 HOH A 169 325 88 HOH HOH . E 3 HOH A 170 326 89 HOH HOH . E 3 HOH A 171 327 90 HOH HOH . E 3 HOH A 172 328 91 HOH HOH . E 3 HOH A 173 329 92 HOH HOH . E 3 HOH A 174 330 93 HOH HOH . E 3 HOH A 175 331 94 HOH HOH . E 3 HOH A 176 332 95 HOH HOH . E 3 HOH A 177 333 98 HOH HOH . E 3 HOH A 178 334 100 HOH HOH . E 3 HOH A 179 335 102 HOH HOH . E 3 HOH A 180 336 103 HOH HOH . E 3 HOH A 181 337 105 HOH HOH . E 3 HOH A 182 338 106 HOH HOH . E 3 HOH A 183 339 107 HOH HOH . E 3 HOH A 184 340 108 HOH HOH . E 3 HOH A 185 341 109 HOH HOH . E 3 HOH A 186 342 110 HOH HOH . E 3 HOH A 187 343 111 HOH HOH . E 3 HOH A 188 344 112 HOH HOH . E 3 HOH A 189 345 113 HOH HOH . E 3 HOH A 190 346 114 HOH HOH . E 3 HOH A 191 347 115 HOH HOH . E 3 HOH A 192 348 116 HOH HOH . E 3 HOH A 193 349 117 HOH HOH . E 3 HOH A 194 350 118 HOH HOH . E 3 HOH A 195 351 119 HOH HOH . E 3 HOH A 196 352 120 HOH HOH . E 3 HOH A 197 353 122 HOH HOH . E 3 HOH A 198 354 123 HOH HOH . E 3 HOH A 199 355 124 HOH HOH . E 3 HOH A 200 356 125 HOH HOH . E 3 HOH A 201 357 126 HOH HOH . E 3 HOH A 202 358 127 HOH HOH . E 3 HOH A 203 359 128 HOH HOH . E 3 HOH A 204 360 129 HOH HOH . E 3 HOH A 205 361 130 HOH HOH . E 3 HOH A 206 362 131 HOH HOH . E 3 HOH A 207 363 132 HOH HOH . E 3 HOH A 208 364 134 HOH HOH . E 3 HOH A 209 365 135 HOH HOH . E 3 HOH A 210 366 136 HOH HOH . E 3 HOH A 211 367 137 HOH HOH . E 3 HOH A 212 368 138 HOH HOH . E 3 HOH A 213 369 140 HOH HOH . E 3 HOH A 214 370 141 HOH HOH . E 3 HOH A 215 371 142 HOH HOH . E 3 HOH A 216 372 143 HOH HOH . E 3 HOH A 217 373 144 HOH HOH . E 3 HOH A 218 374 145 HOH HOH . E 3 HOH A 219 375 147 HOH HOH . E 3 HOH A 220 376 148 HOH HOH . E 3 HOH A 221 377 149 HOH HOH . E 3 HOH A 222 378 150 HOH HOH . E 3 HOH A 223 379 152 HOH HOH . E 3 HOH A 224 380 153 HOH HOH . E 3 HOH A 225 381 154 HOH HOH . E 3 HOH A 226 382 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . B 2 -8.445 9.138 7.807 1 10.71 ? N NO3 154 A 1 HETATM 2 O O1 NO3 . . . B 2 -8.227 9.615 6.512 1 13.24 ? O1 NO3 154 A 1 HETATM 3 O O2 NO3 . . . B 2 -8.922 9.883 8.59 1 13.33 ? O2 NO3 154 A 1 HETATM 4 O O3 NO3 . . . B 2 -8.185 8.019 7.975 1 8.71 ? O3 NO3 154 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #