data_3JVB # _model_server_result.job_id pnzvZNgxdlb2evI8-d9wUA _model_server_result.datetime_utc '2025-01-21 01:36:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jvb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":244}' # _entry.id 3JVB # _exptl.entry_id 3JVB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JVB _cell.length_a 102.437 _cell.length_b 102.437 _cell.length_c 102.437 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JVB _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 102.437 102.437 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 102.437 0 102.437 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 102.437 102.437 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_566 z,-x+1,-y+1 0 0 1 -1 0 0 0 -1 0 0 102.437 102.437 7 'crystal symmetry operation' 7_665 -z+1,-x+1,y 0 0 -1 -1 0 0 0 1 0 102.437 102.437 0 8 'crystal symmetry operation' 8_656 -z+1,x,-y+1 0 0 -1 1 0 0 0 -1 0 102.437 0 102.437 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_656 -y+1,z,-x+1 0 -1 0 0 0 1 -1 0 0 102.437 0 102.437 11 'crystal symmetry operation' 11_566 y,-z+1,-x+1 0 1 0 0 0 -1 -1 0 0 0 102.437 102.437 12 'crystal symmetry operation' 12_665 -y+1,-z+1,x 0 -1 0 0 0 -1 1 0 0 102.437 102.437 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 131 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 131 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 131 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 131 _struct_conn.ptnr2_symmetry 4_566 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.249 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3JVB _atom_sites.fract_transf_matrix[1][1] 0.009762 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 244 1 SO4 SO4 . C 3 HOH A 1 245 1 HOH HOH . C 3 HOH A 2 246 2 HOH HOH . C 3 HOH A 3 247 3 HOH HOH . C 3 HOH A 4 248 4 HOH HOH . C 3 HOH A 5 249 5 HOH HOH . C 3 HOH A 6 250 6 HOH HOH . C 3 HOH A 7 251 7 HOH HOH . C 3 HOH A 8 252 8 HOH HOH . C 3 HOH A 9 253 9 HOH HOH . C 3 HOH A 10 254 10 HOH HOH . C 3 HOH A 11 255 11 HOH HOH . C 3 HOH A 12 256 12 HOH HOH . C 3 HOH A 13 257 13 HOH HOH . C 3 HOH A 14 258 14 HOH HOH . C 3 HOH A 15 259 15 HOH HOH . C 3 HOH A 16 260 16 HOH HOH . C 3 HOH A 17 261 17 HOH HOH . C 3 HOH A 18 262 18 HOH HOH . C 3 HOH A 19 263 19 HOH HOH . C 3 HOH A 20 264 20 HOH HOH . C 3 HOH A 21 265 21 HOH HOH . C 3 HOH A 22 266 22 HOH HOH . C 3 HOH A 23 267 23 HOH HOH . C 3 HOH A 24 268 24 HOH HOH . C 3 HOH A 25 269 25 HOH HOH . C 3 HOH A 26 270 26 HOH HOH . C 3 HOH A 27 271 27 HOH HOH . C 3 HOH A 28 272 28 HOH HOH . C 3 HOH A 29 273 30 HOH HOH . C 3 HOH A 30 274 31 HOH HOH . C 3 HOH A 31 275 32 HOH HOH . C 3 HOH A 32 276 33 HOH HOH . C 3 HOH A 33 277 34 HOH HOH . C 3 HOH A 34 278 35 HOH HOH . C 3 HOH A 35 279 36 HOH HOH . C 3 HOH A 36 280 37 HOH HOH . C 3 HOH A 37 281 38 HOH HOH . C 3 HOH A 38 282 39 HOH HOH . C 3 HOH A 39 283 40 HOH HOH . C 3 HOH A 40 284 41 HOH HOH . C 3 HOH A 41 285 42 HOH HOH . C 3 HOH A 42 286 44 HOH HOH . C 3 HOH A 43 287 45 HOH HOH . C 3 HOH A 44 288 47 HOH HOH . C 3 HOH A 45 289 48 HOH HOH . C 3 HOH A 46 290 49 HOH HOH . C 3 HOH A 47 291 50 HOH HOH . C 3 HOH A 48 292 51 HOH HOH . C 3 HOH A 49 293 52 HOH HOH . C 3 HOH A 50 294 53 HOH HOH . C 3 HOH A 51 295 54 HOH HOH . C 3 HOH A 52 296 55 HOH HOH . C 3 HOH A 53 297 56 HOH HOH . C 3 HOH A 54 298 57 HOH HOH . C 3 HOH A 55 299 58 HOH HOH . C 3 HOH A 56 300 59 HOH HOH . C 3 HOH A 57 301 60 HOH HOH . C 3 HOH A 58 302 62 HOH HOH . C 3 HOH A 59 303 63 HOH HOH . C 3 HOH A 60 304 64 HOH HOH . C 3 HOH A 61 305 65 HOH HOH . C 3 HOH A 62 306 67 HOH HOH . C 3 HOH A 63 307 70 HOH HOH . C 3 HOH A 64 308 72 HOH HOH . C 3 HOH A 65 309 73 HOH HOH . C 3 HOH A 66 310 74 HOH HOH . C 3 HOH A 67 311 76 HOH HOH . C 3 HOH A 68 312 77 HOH HOH . C 3 HOH A 69 313 78 HOH HOH . C 3 HOH A 70 314 79 HOH HOH . C 3 HOH A 71 315 80 HOH HOH . C 3 HOH A 72 316 81 HOH HOH . C 3 HOH A 73 317 86 HOH HOH . C 3 HOH A 74 318 89 HOH HOH . C 3 HOH A 75 319 102 HOH HOH . C 3 HOH A 76 320 103 HOH HOH . C 3 HOH A 77 321 106 HOH HOH . C 3 HOH A 78 322 107 HOH HOH . C 3 HOH A 79 323 108 HOH HOH . C 3 HOH A 80 324 109 HOH HOH . C 3 HOH A 81 325 110 HOH HOH . C 3 HOH A 82 326 114 HOH HOH . C 3 HOH A 83 327 115 HOH HOH . C 3 HOH A 84 328 116 HOH HOH . C 3 HOH A 85 329 117 HOH HOH . C 3 HOH A 86 330 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 59.144 43.293 43.293 0.33 88.94 ? S SO4 244 A 1 HETATM 2 O O1 SO4 . . . B 2 59.989 42.446 42.446 0.33 93.35 ? O1 SO4 244 A 1 HETATM 3 O O2 SO4 . . . B 2 57.738 43.085 42.94 0.33 93.63 ? O2 SO4 244 A 1 HETATM 4 O O3 SO4 . . . B 2 59.354 42.939 44.699 0.33 94.7 ? O3 SO4 244 A 1 HETATM 5 O O4 SO4 . . . B 2 59.498 44.699 43.084 0.33 94.15 ? O4 SO4 244 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #