data_3JW5 # _model_server_result.job_id his3kgGUmgdFoANEzqTx9w _model_server_result.datetime_utc '2025-02-24 13:20:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":208}' # _entry.id 3JW5 # _exptl.entry_id 3JW5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.318 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIMETHOPRIM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JW5 _cell.length_a 74.991 _cell.length_b 74.991 _cell.length_c 67.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C14 H18 N4 O3' _chem_comp.formula_weight 290.318 _chem_comp.id TOP _chem_comp.mon_nstd_flag . _chem_comp.name TRIMETHOPRIM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 TOP doub 388 n y C1 C8 TOP sing 389 n y C1 H1 TOP sing 390 n n N2 C3 TOP sing 391 n y C3 N4 TOP sing 392 n n C3 N5 TOP doub 393 n y N4 HN41 TOP sing 394 n n N4 HN42 TOP sing 395 n n N5 C6 TOP sing 396 n y C6 N7 TOP sing 397 n n C6 C8 TOP doub 398 n y N7 HN71 TOP sing 399 n n N7 HN72 TOP sing 400 n n C8 C9 TOP sing 401 n n C9 C10 TOP sing 402 n n C9 H91 TOP sing 403 n n C9 H92 TOP sing 404 n n C10 C11 TOP doub 405 n y C10 C21 TOP sing 406 n y C11 C12 TOP sing 407 n y C11 H11 TOP sing 408 n n C12 O13 TOP sing 409 n n C12 C15 TOP doub 410 n y O13 C14 TOP sing 411 n n C14 H141 TOP sing 412 n n C14 H142 TOP sing 413 n n C14 H143 TOP sing 414 n n C15 O16 TOP sing 415 n n C15 C18 TOP sing 416 n y O16 C17 TOP sing 417 n n C17 H171 TOP sing 418 n n C17 H172 TOP sing 419 n n C17 H173 TOP sing 420 n n C18 O19 TOP sing 421 n n C18 C21 TOP doub 422 n y O19 C20 TOP sing 423 n n C20 H201 TOP sing 424 n n C20 H202 TOP sing 425 n n C20 H203 TOP sing 426 n n C21 H21 TOP sing 427 n n # _atom_sites.entry_id 3JW5 _atom_sites.fract_transf_matrix[1][1] 0.013335 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 207 207 NDP NAP . D 3 TOP A 1 208 1 TOP TOP . E 2 NDP B 1 207 207 NDP NAP . F 3 TOP B 1 208 1 TOP TOP . G 4 HOH A 1 163 3 HOH HOH . G 4 HOH A 2 164 4 HOH HOH . G 4 HOH A 3 165 8 HOH HOH . G 4 HOH A 4 166 13 HOH HOH . G 4 HOH A 5 167 18 HOH HOH . G 4 HOH A 6 168 19 HOH HOH . G 4 HOH A 7 169 22 HOH HOH . G 4 HOH A 8 170 27 HOH HOH . G 4 HOH A 9 171 29 HOH HOH . G 4 HOH A 10 172 30 HOH HOH . G 4 HOH A 11 173 31 HOH HOH . G 4 HOH A 12 174 32 HOH HOH . G 4 HOH A 13 175 35 HOH HOH . G 4 HOH A 14 176 38 HOH HOH . G 4 HOH A 15 177 44 HOH HOH . G 4 HOH A 16 178 45 HOH HOH . H 4 HOH B 1 163 2 HOH HOH . H 4 HOH B 2 164 5 HOH HOH . H 4 HOH B 3 165 6 HOH HOH . H 4 HOH B 4 166 7 HOH HOH . H 4 HOH B 5 167 9 HOH HOH . H 4 HOH B 6 168 10 HOH HOH . H 4 HOH B 7 169 14 HOH HOH . H 4 HOH B 8 170 17 HOH HOH . H 4 HOH B 9 171 20 HOH HOH . H 4 HOH B 10 172 21 HOH HOH . H 4 HOH B 11 173 24 HOH HOH . H 4 HOH B 12 174 26 HOH HOH . H 4 HOH B 13 175 28 HOH HOH . H 4 HOH B 14 176 33 HOH HOH . H 4 HOH B 15 177 34 HOH HOH . H 4 HOH B 16 178 36 HOH HOH . H 4 HOH B 17 179 37 HOH HOH . H 4 HOH B 18 180 40 HOH HOH . H 4 HOH B 19 181 41 HOH HOH . H 4 HOH B 20 182 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TOP . . . F 3 9.716 -12.187 -2.596 1 38.28 ? C1 TOP 208 B 1 HETATM 2 N N2 TOP . . . F 3 9.54 -13.516 -2.736 1 37.65 ? N2 TOP 208 B 1 HETATM 3 C C3 TOP . . . F 3 9.533 -14.121 -3.954 1 38.32 ? C3 TOP 208 B 1 HETATM 4 N N4 TOP . . . F 3 9.351 -15.457 -4.044 1 38.33 ? N4 TOP 208 B 1 HETATM 5 N N5 TOP . . . F 3 9.708 -13.415 -5.096 1 38.05 ? N5 TOP 208 B 1 HETATM 6 C C6 TOP . . . F 3 9.895 -12.078 -5.049 1 38.18 ? C6 TOP 208 B 1 HETATM 7 N N7 TOP . . . F 3 10.07 -11.41 -6.211 1 37.96 ? N7 TOP 208 B 1 HETATM 8 C C8 TOP . . . F 3 9.909 -11.38 -3.725 1 38.72 ? C8 TOP 208 B 1 HETATM 9 C C9 TOP . . . F 3 10.113 -9.862 -3.648 1 40.01 ? C9 TOP 208 B 1 HETATM 10 C C10 TOP . . . F 3 10.64 -9.274 -2.336 1 41.06 ? C10 TOP 208 B 1 HETATM 11 C C11 TOP . . . F 3 11.839 -9.741 -1.773 1 41.25 ? C11 TOP 208 B 1 HETATM 12 C C12 TOP . . . F 3 12.349 -9.217 -0.584 1 41.13 ? C12 TOP 208 B 1 HETATM 13 O O13 TOP . . . F 3 13.512 -9.724 -0.061 1 41.13 ? O13 TOP 208 B 1 HETATM 14 C C14 TOP . . . F 3 14.723 -8.968 -0.027 1 42.87 ? C14 TOP 208 B 1 HETATM 15 C C15 TOP . . . F 3 11.606 -8.129 0.114 1 40.97 ? C15 TOP 208 B 1 HETATM 16 O O16 TOP . . . F 3 12.087 -7.601 1.292 1 41.59 ? O16 TOP 208 B 1 HETATM 17 C C17 TOP . . . F 3 11.988 -8.311 2.531 1 41.68 ? C17 TOP 208 B 1 HETATM 18 C C18 TOP . . . F 3 10.345 -7.638 -0.519 1 41.04 ? C18 TOP 208 B 1 HETATM 19 O O19 TOP . . . F 3 9.565 -6.632 0.028 1 41.24 ? O19 TOP 208 B 1 HETATM 20 C C20 TOP . . . F 3 9.987 -5.686 1.019 1 40.98 ? C20 TOP 208 B 1 HETATM 21 C C21 TOP . . . F 3 9.929 -8.235 -1.717 1 40.75 ? C21 TOP 208 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 21 #