data_3JWF # _model_server_result.job_id 9JkQ09QpifnabbmsyfkrWA _model_server_result.datetime_utc '2025-02-27 11:50:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jwf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":207}' # _entry.id 3JWF # _exptl.entry_id 3JWF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3JWF _cell.length_a 77.893 _cell.length_b 77.893 _cell.length_c 67.055 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JWF _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 283 n n PA O2A NDP sing 284 n n PA O5B NDP sing 285 n n PA O3 NDP sing 286 n n O2A HOA2 NDP sing 287 n n O5B C5B NDP sing 288 n n C5B C4B NDP sing 289 n n C5B H51A NDP sing 290 n n C5B H52A NDP sing 291 n n C4B O4B NDP sing 292 n n C4B C3B NDP sing 293 n n C4B H4B NDP sing 294 n n O4B C1B NDP sing 295 n n C3B O3B NDP sing 296 n n C3B C2B NDP sing 297 n n C3B H3B NDP sing 298 n n O3B HO3A NDP sing 299 n n C2B O2B NDP sing 300 n n C2B C1B NDP sing 301 n n C2B H2B NDP sing 302 n n O2B P2B NDP sing 303 n n C1B N9A NDP sing 304 n n C1B H1B NDP sing 305 n n N9A C8A NDP sing 306 n y N9A C4A NDP sing 307 n y C8A N7A NDP doub 308 n y C8A H8A NDP sing 309 n n N7A C5A NDP sing 310 n y C5A C6A NDP sing 311 n y C5A C4A NDP doub 312 n y C6A N6A NDP sing 313 n n C6A N1A NDP doub 314 n y N6A H61A NDP sing 315 n n N6A H62A NDP sing 316 n n N1A C2A NDP sing 317 n y C2A N3A NDP doub 318 n y C2A H2A NDP sing 319 n n N3A C4A NDP sing 320 n y O3 PN NDP sing 321 n n PN O1N NDP doub 322 n n PN O2N NDP sing 323 n n PN O5D NDP sing 324 n n O2N H21N NDP sing 325 n n O5D C5D NDP sing 326 n n C5D C4D NDP sing 327 n n C5D H51N NDP sing 328 n n C5D H52N NDP sing 329 n n C4D O4D NDP sing 330 n n C4D C3D NDP sing 331 n n C4D H4D NDP sing 332 n n O4D C1D NDP sing 333 n n C3D O3D NDP sing 334 n n C3D C2D NDP sing 335 n n C3D H3D NDP sing 336 n n O3D HO3N NDP sing 337 n n C2D O2D NDP sing 338 n n C2D C1D NDP sing 339 n n C2D H2D NDP sing 340 n n O2D HO2N NDP sing 341 n n C1D N1N NDP sing 342 n n C1D H1D NDP sing 343 n n N1N C2N NDP sing 344 n n N1N C6N NDP sing 345 n n C2N C3N NDP doub 346 n n C2N H2N NDP sing 347 n n C3N C7N NDP sing 348 n n C3N C4N NDP sing 349 n n C7N O7N NDP doub 350 n n C7N N7N NDP sing 351 n n N7N H71N NDP sing 352 n n N7N H72N NDP sing 353 n n C4N C5N NDP sing 354 n n C4N H41N NDP sing 355 n n C4N H42N NDP sing 356 n n C5N C6N NDP doub 357 n n C5N H5N NDP sing 358 n n C6N H6N NDP sing 359 n n P2B O1X NDP doub 360 n n P2B O2X NDP sing 361 n n P2B O3X NDP sing 362 n n O2X HOP2 NDP sing 363 n n O3X HOP3 NDP sing 364 n n # _atom_sites.entry_id 3JWF _atom_sites.fract_transf_matrix[1][1] 0.012838 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 207 207 NDP NAP . D 3 5WA A 1 208 1 5WA 5WA . E 2 NDP B 1 207 207 NDP NAP . F 3 5WA B 1 208 1 5WA 5WA . G 4 HOH A 1 163 4 HOH HOH . G 4 HOH A 2 164 5 HOH HOH . G 4 HOH A 3 165 7 HOH HOH . G 4 HOH A 4 166 9 HOH HOH . G 4 HOH A 5 167 11 HOH HOH . G 4 HOH A 6 168 13 HOH HOH . G 4 HOH A 7 169 14 HOH HOH . G 4 HOH A 8 170 15 HOH HOH . G 4 HOH A 9 171 16 HOH HOH . G 4 HOH A 10 172 21 HOH HOH . G 4 HOH A 11 173 23 HOH HOH . G 4 HOH A 12 174 24 HOH HOH . G 4 HOH A 13 175 26 HOH HOH . G 4 HOH A 14 176 27 HOH HOH . G 4 HOH A 15 177 28 HOH HOH . G 4 HOH A 16 178 29 HOH HOH . G 4 HOH A 17 179 31 HOH HOH . G 4 HOH A 18 180 32 HOH HOH . G 4 HOH A 19 181 34 HOH HOH . G 4 HOH A 20 182 35 HOH HOH . G 4 HOH A 21 183 36 HOH HOH . G 4 HOH A 22 184 41 HOH HOH . G 4 HOH A 23 185 42 HOH HOH . G 4 HOH A 24 186 44 HOH HOH . G 4 HOH A 25 187 45 HOH HOH . G 4 HOH A 26 188 46 HOH HOH . G 4 HOH A 27 189 48 HOH HOH . G 4 HOH A 28 190 50 HOH HOH . G 4 HOH A 29 191 51 HOH HOH . G 4 HOH A 30 192 52 HOH HOH . G 4 HOH A 31 193 56 HOH HOH . G 4 HOH A 32 194 60 HOH HOH . G 4 HOH A 33 195 61 HOH HOH . G 4 HOH A 34 196 63 HOH HOH . G 4 HOH A 35 197 68 HOH HOH . G 4 HOH A 36 198 69 HOH HOH . G 4 HOH A 37 199 72 HOH HOH . G 4 HOH A 38 200 73 HOH HOH . G 4 HOH A 39 201 75 HOH HOH . G 4 HOH A 40 202 80 HOH HOH . G 4 HOH A 41 203 83 HOH HOH . G 4 HOH A 42 204 84 HOH HOH . G 4 HOH A 43 205 85 HOH HOH . G 4 HOH A 44 206 86 HOH HOH . G 4 HOH A 45 209 88 HOH HOH . G 4 HOH A 46 210 89 HOH HOH . G 4 HOH A 47 211 90 HOH HOH . G 4 HOH A 48 212 95 HOH HOH . G 4 HOH A 49 213 97 HOH HOH . G 4 HOH A 50 214 98 HOH HOH . G 4 HOH A 51 215 101 HOH HOH . G 4 HOH A 52 216 102 HOH HOH . G 4 HOH A 53 217 103 HOH HOH . G 4 HOH A 54 218 108 HOH HOH . G 4 HOH A 55 219 111 HOH HOH . G 4 HOH A 56 220 113 HOH HOH . G 4 HOH A 57 221 114 HOH HOH . H 4 HOH B 1 163 1 HOH HOH . H 4 HOH B 2 164 2 HOH HOH . H 4 HOH B 3 165 3 HOH HOH . H 4 HOH B 4 166 6 HOH HOH . H 4 HOH B 5 167 8 HOH HOH . H 4 HOH B 6 168 10 HOH HOH . H 4 HOH B 7 169 12 HOH HOH . H 4 HOH B 8 170 18 HOH HOH . H 4 HOH B 9 171 19 HOH HOH . H 4 HOH B 10 172 20 HOH HOH . H 4 HOH B 11 173 22 HOH HOH . H 4 HOH B 12 174 25 HOH HOH . H 4 HOH B 13 175 30 HOH HOH . H 4 HOH B 14 176 33 HOH HOH . H 4 HOH B 15 177 37 HOH HOH . H 4 HOH B 16 178 38 HOH HOH . H 4 HOH B 17 179 39 HOH HOH . H 4 HOH B 18 180 40 HOH HOH . H 4 HOH B 19 181 43 HOH HOH . H 4 HOH B 20 182 47 HOH HOH . H 4 HOH B 21 183 49 HOH HOH . H 4 HOH B 22 184 53 HOH HOH . H 4 HOH B 23 185 54 HOH HOH . H 4 HOH B 24 186 55 HOH HOH . H 4 HOH B 25 187 57 HOH HOH . H 4 HOH B 26 188 58 HOH HOH . H 4 HOH B 27 189 59 HOH HOH . H 4 HOH B 28 190 62 HOH HOH . H 4 HOH B 29 191 64 HOH HOH . H 4 HOH B 30 192 66 HOH HOH . H 4 HOH B 31 193 67 HOH HOH . H 4 HOH B 32 194 70 HOH HOH . H 4 HOH B 33 195 71 HOH HOH . H 4 HOH B 34 196 74 HOH HOH . H 4 HOH B 35 197 78 HOH HOH . H 4 HOH B 36 198 79 HOH HOH . H 4 HOH B 37 199 81 HOH HOH . H 4 HOH B 38 200 82 HOH HOH . H 4 HOH B 39 201 87 HOH HOH . H 4 HOH B 40 202 91 HOH HOH . H 4 HOH B 41 203 92 HOH HOH . H 4 HOH B 42 204 94 HOH HOH . H 4 HOH B 43 205 96 HOH HOH . H 4 HOH B 44 206 99 HOH HOH . H 4 HOH B 45 209 100 HOH HOH . H 4 HOH B 46 210 104 HOH HOH . H 4 HOH B 47 211 106 HOH HOH . H 4 HOH B 48 212 107 HOH HOH . H 4 HOH B 49 213 109 HOH HOH . H 4 HOH B 50 214 110 HOH HOH . H 4 HOH B 51 215 115 HOH HOH . H 4 HOH B 52 216 116 HOH HOH . H 4 HOH B 53 217 117 HOH HOH . H 4 HOH B 54 218 118 HOH HOH . H 4 HOH B 55 219 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 34.393 43.009 -0.533 1 25.68 ? PA NDP 207 A 1 HETATM 2 O O1A NDP . . . C 2 33.808 42.289 0.62 1 25.34 ? O1A NDP 207 A 1 HETATM 3 O O2A NDP . . . C 2 33.365 43.727 -1.31 1 25.29 ? O2A NDP 207 A 1 HETATM 4 O O5B NDP . . . C 2 35.544 44.013 -0.038 1 25.86 ? O5B NDP 207 A 1 HETATM 5 C C5B NDP . . . C 2 36.607 43.49 0.732 1 26.78 ? C5B NDP 207 A 1 HETATM 6 C C4B NDP . . . C 2 37.358 44.666 1.326 1 26.97 ? C4B NDP 207 A 1 HETATM 7 O O4B NDP . . . C 2 36.609 45.246 2.376 1 27.43 ? O4B NDP 207 A 1 HETATM 8 C C3B NDP . . . C 2 38.694 44.297 1.94 1 26.42 ? C3B NDP 207 A 1 HETATM 9 O O3B NDP . . . C 2 39.708 44.249 0.971 1 26.88 ? O3B NDP 207 A 1 HETATM 10 C C2B NDP . . . C 2 38.892 45.449 2.89 1 25.97 ? C2B NDP 207 A 1 HETATM 11 O O2B NDP . . . C 2 39.289 46.577 2.155 1 24.15 ? O2B NDP 207 A 1 HETATM 12 C C1B NDP . . . C 2 37.478 45.726 3.378 1 27.74 ? C1B NDP 207 A 1 HETATM 13 N N9A NDP . . . C 2 37.241 45.051 4.673 1 28.22 ? N9A NDP 207 A 1 HETATM 14 C C8A NDP . . . C 2 37.061 43.711 4.888 1 28.26 ? C8A NDP 207 A 1 HETATM 15 N N7A NDP . . . C 2 36.895 43.513 6.212 1 28.7 ? N7A NDP 207 A 1 HETATM 16 C C5A NDP . . . C 2 36.969 44.7 6.847 1 28.19 ? C5A NDP 207 A 1 HETATM 17 C C6A NDP . . . C 2 36.87 45.062 8.183 1 28.32 ? C6A NDP 207 A 1 HETATM 18 N N6A NDP . . . C 2 36.654 44.137 9.109 1 28.08 ? N6A NDP 207 A 1 HETATM 19 N N1A NDP . . . C 2 36.992 46.392 8.549 1 28.74 ? N1A NDP 207 A 1 HETATM 20 C C2A NDP . . . C 2 37.21 47.354 7.582 1 28.47 ? C2A NDP 207 A 1 HETATM 21 N N3A NDP . . . C 2 37.306 46.981 6.257 1 28.5 ? N3A NDP 207 A 1 HETATM 22 C C4A NDP . . . C 2 37.189 45.678 5.893 1 28.37 ? C4A NDP 207 A 1 HETATM 23 O O3 NDP . . . C 2 35.245 41.995 -1.448 1 26.14 ? O3 NDP 207 A 1 HETATM 24 P PN NDP . . . C 2 34.967 40.471 -1.862 1 26.29 ? PN NDP 207 A 1 HETATM 25 O O1N NDP . . . C 2 36.12 39.987 -2.653 1 26.53 ? O1N NDP 207 A 1 HETATM 26 O O2N NDP . . . C 2 34.561 39.758 -0.627 1 27.16 ? O2N NDP 207 A 1 HETATM 27 O O5D NDP . . . C 2 33.66 40.58 -2.808 1 25.48 ? O5D NDP 207 A 1 HETATM 28 C C5D NDP . . . C 2 33.684 41.189 -4.077 1 23.16 ? C5D NDP 207 A 1 HETATM 29 C C4D NDP . . . C 2 33.091 40.223 -5.099 1 23.22 ? C4D NDP 207 A 1 HETATM 30 O O4D NDP . . . C 2 31.73 39.903 -4.844 1 22.64 ? O4D NDP 207 A 1 HETATM 31 C C3D NDP . . . C 2 33.118 40.815 -6.491 1 22.9 ? C3D NDP 207 A 1 HETATM 32 O O3D NDP . . . C 2 33.315 39.728 -7.37 1 22.68 ? O3D NDP 207 A 1 HETATM 33 C C2D NDP . . . C 2 31.73 41.384 -6.664 1 21.78 ? C2D NDP 207 A 1 HETATM 34 O O2D NDP . . . C 2 31.376 41.43 -8.023 1 22.3 ? O2D NDP 207 A 1 HETATM 35 C C1D NDP . . . C 2 30.894 40.382 -5.892 1 21.6 ? C1D NDP 207 A 1 HETATM 36 N N1N NDP . . . C 2 29.625 40.921 -5.351 1 20.93 ? N1N NDP 207 A 1 HETATM 37 C C2N NDP . . . C 2 28.473 40.247 -5.658 1 20.04 ? C2N NDP 207 A 1 HETATM 38 C C3N NDP . . . C 2 27.241 40.673 -5.173 1 19.63 ? C3N NDP 207 A 1 HETATM 39 C C7N NDP . . . C 2 26.013 39.865 -5.477 1 19.32 ? C7N NDP 207 A 1 HETATM 40 O O7N NDP . . . C 2 24.812 40.148 -4.793 1 19.4 ? O7N NDP 207 A 1 HETATM 41 N N7N NDP . . . C 2 26.08 38.895 -6.389 1 17.86 ? N7N NDP 207 A 1 HETATM 42 C C4N NDP . . . C 2 27.182 41.797 -4.347 1 20.1 ? C4N NDP 207 A 1 HETATM 43 C C5N NDP . . . C 2 28.359 42.477 -4.033 1 19.69 ? C5N NDP 207 A 1 HETATM 44 C C6N NDP . . . C 2 29.579 42.028 -4.54 1 20.18 ? C6N NDP 207 A 1 HETATM 45 P P2B NDP . . . C 2 40.785 47.149 2.154 1 22.31 ? P2B NDP 207 A 1 HETATM 46 O O1X NDP . . . C 2 41.206 47.438 3.572 1 21.95 ? O1X NDP 207 A 1 HETATM 47 O O2X NDP . . . C 2 41.694 46.112 1.545 1 22.5 ? O2X NDP 207 A 1 HETATM 48 O O3X NDP . . . C 2 40.801 48.404 1.325 1 21.75 ? O3X NDP 207 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #