data_3JXQ # _model_server_result.job_id dkmkKiGdiPtV6Fw8N5Wd2A _model_server_result.datetime_utc '2025-03-06 06:53:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jxq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":7}' # _entry.id 3JXQ # _exptl.entry_id 3JXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 97.56 _cell.angle_beta 105.47 _cell.angle_gamma 109.38 _cell.entry_id 3JXQ _cell.length_a 21.224 _cell.length_b 26.486 _cell.length_c 29.31 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' G 4 A G 4 1_555 A P 5CF 5 A 5CF 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.598 ? covale ? covale2 A O3' 5CF 5 A 5CF 5 1_555 A P G 6 A G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? covale ? covale3 B O3' G 4 B G 4 1_555 B P 5CF 5 B 5CF 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? covale ? covale4 B O3' 5CF 5 B 5CF 5 1_555 B P G 6 B G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.625 ? covale ? covale5 C O3' G 4 K G 4 1_555 C P 5CF 5 K 5CF 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? covale ? covale6 C O3' 5CF 5 K 5CF 5 1_555 C P G 6 K G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.585 ? covale ? covale7 D O3' G 4 L G 4 1_555 D P 5CF 5 L 5CF 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.612 ? covale ? covale8 D O3' 5CF 5 L 5CF 5 1_555 D P G 6 L G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? hydrog WATSON-CRICK hydrog1 A N3 C 1 A C 1 1_555 B N1 G 6 B G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 C 1 A C 1 1_555 B O6 G 6 B G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 C 1 A C 1 1_555 B N2 G 6 B G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 C 3 A C 3 1_555 B N1 G 4 B G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 C 3 A C 3 1_555 B O6 G 4 B G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 C 3 A C 3 1_555 B N2 G 4 B G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 G 4 A G 4 1_555 B N3 C 3 B C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 G 4 A G 4 1_555 B O2 C 3 B C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 G 4 A G 4 1_555 B N4 C 3 B C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 G 6 A G 6 1_555 B N3 C 1 B C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 G 6 A G 6 1_555 B O2 C 1 B C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 G 6 A G 6 1_555 B N4 C 1 B C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C N3 C 1 K C 1 1_555 D N1 G 6 L G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N4 C 1 K C 1 1_555 D O6 G 6 L G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C O2 C 1 K C 1 1_555 D N2 G 6 L G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C N3 C 3 K C 3 1_555 D N1 G 4 L G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 C N4 C 3 K C 3 1_555 D O6 G 4 L G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 C O2 C 3 K C 3 1_555 D N2 G 4 L G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 C N1 G 4 K G 4 1_555 D N3 C 3 L C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 C N2 G 4 K G 4 1_555 D O2 C 3 L C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 C O6 G 4 K G 4 1_555 D N4 C 3 L C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 C N1 G 6 K G 6 1_555 D N3 C 1 L C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 C N2 G 6 K G 6 1_555 D O2 C 1 L C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 C O6 G 6 K G 6 1_555 D N4 C 1 L C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3JXQ _atom_sites.fract_transf_matrix[1][1] 0.047116 _atom_sites.fract_transf_matrix[1][2] 0.016571 _atom_sites.fract_transf_matrix[1][3] 0.017574 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.040023 _atom_sites.fract_transf_matrix[2][3] 0.009985 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.036486 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 7 4 MG MG . F 2 MG B 1 7 1 MG MG . G 2 MG K 1 7 2 MG MG . H 2 MG L 1 7 3 MG MG . I 3 HOH A 1 8 4 HOH HOH . I 3 HOH A 2 9 8 HOH HOH . I 3 HOH A 3 10 10 HOH HOH . I 3 HOH A 4 11 11 HOH HOH . I 3 HOH A 5 13 13 HOH HOH . I 3 HOH A 6 15 15 HOH HOH . I 3 HOH A 7 18 18 HOH HOH . I 3 HOH A 8 19 19 HOH HOH . I 3 HOH A 9 21 21 HOH HOH . I 3 HOH A 10 22 22 HOH HOH . I 3 HOH A 11 23 23 HOH HOH . I 3 HOH A 12 24 24 HOH HOH . I 3 HOH A 13 31 31 HOH HOH . I 3 HOH A 14 32 32 HOH HOH . I 3 HOH A 15 49 49 HOH HOH . I 3 HOH A 16 51 51 HOH HOH . I 3 HOH A 17 60 60 HOH HOH . I 3 HOH A 18 62 62 HOH HOH . I 3 HOH A 19 65 65 HOH HOH . I 3 HOH A 20 78 78 HOH HOH . I 3 HOH A 21 79 79 HOH HOH . I 3 HOH A 22 81 81 HOH HOH . I 3 HOH A 23 83 83 HOH HOH . I 3 HOH A 24 87 87 HOH HOH . I 3 HOH A 25 89 89 HOH HOH . I 3 HOH A 26 90 90 HOH HOH . I 3 HOH A 27 97 97 HOH HOH . I 3 HOH A 28 100 100 HOH HOH . I 3 HOH A 29 109 109 HOH HOH . I 3 HOH A 30 118 118 HOH HOH . I 3 HOH A 31 119 119 HOH HOH . I 3 HOH A 32 125 125 HOH HOH . I 3 HOH A 33 127 127 HOH HOH . I 3 HOH A 34 129 129 HOH HOH . I 3 HOH A 35 130 130 HOH HOH . J 3 HOH B 1 8 3 HOH HOH . J 3 HOH B 2 9 9 HOH HOH . J 3 HOH B 3 10 5 HOH HOH . J 3 HOH B 4 11 6 HOH HOH . J 3 HOH B 5 12 12 HOH HOH . J 3 HOH B 6 14 14 HOH HOH . J 3 HOH B 7 17 17 HOH HOH . J 3 HOH B 8 25 25 HOH HOH . J 3 HOH B 9 28 28 HOH HOH . J 3 HOH B 10 30 30 HOH HOH . J 3 HOH B 11 33 33 HOH HOH . J 3 HOH B 12 34 34 HOH HOH . J 3 HOH B 13 40 40 HOH HOH . J 3 HOH B 14 43 43 HOH HOH . J 3 HOH B 15 50 50 HOH HOH . J 3 HOH B 16 53 53 HOH HOH . J 3 HOH B 17 55 55 HOH HOH . J 3 HOH B 18 61 61 HOH HOH . J 3 HOH B 19 63 63 HOH HOH . J 3 HOH B 20 66 66 HOH HOH . J 3 HOH B 21 71 71 HOH HOH . J 3 HOH B 22 77 77 HOH HOH . J 3 HOH B 23 80 80 HOH HOH . J 3 HOH B 24 84 84 HOH HOH . J 3 HOH B 25 91 91 HOH HOH . J 3 HOH B 26 93 93 HOH HOH . J 3 HOH B 27 94 94 HOH HOH . J 3 HOH B 28 96 96 HOH HOH . J 3 HOH B 29 101 101 HOH HOH . J 3 HOH B 30 102 102 HOH HOH . J 3 HOH B 31 104 104 HOH HOH . J 3 HOH B 32 106 106 HOH HOH . J 3 HOH B 33 108 108 HOH HOH . J 3 HOH B 34 110 110 HOH HOH . J 3 HOH B 35 113 113 HOH HOH . J 3 HOH B 36 120 120 HOH HOH . J 3 HOH B 37 121 121 HOH HOH . J 3 HOH B 38 124 124 HOH HOH . J 3 HOH B 39 132 132 HOH HOH . K 3 HOH K 1 8 1 HOH HOH . K 3 HOH K 2 9 2 HOH HOH . K 3 HOH K 3 20 20 HOH HOH . K 3 HOH K 4 26 26 HOH HOH . K 3 HOH K 5 27 27 HOH HOH . K 3 HOH K 6 29 29 HOH HOH . K 3 HOH K 7 36 36 HOH HOH . K 3 HOH K 8 37 37 HOH HOH . K 3 HOH K 9 41 41 HOH HOH . K 3 HOH K 10 42 42 HOH HOH . K 3 HOH K 11 44 44 HOH HOH . K 3 HOH K 12 46 46 HOH HOH . K 3 HOH K 13 47 47 HOH HOH . K 3 HOH K 14 52 52 HOH HOH . K 3 HOH K 15 57 57 HOH HOH . K 3 HOH K 16 58 58 HOH HOH . K 3 HOH K 17 59 59 HOH HOH . K 3 HOH K 18 64 64 HOH HOH . K 3 HOH K 19 69 69 HOH HOH . K 3 HOH K 20 70 70 HOH HOH . K 3 HOH K 21 73 73 HOH HOH . K 3 HOH K 22 82 82 HOH HOH . K 3 HOH K 23 85 85 HOH HOH . K 3 HOH K 24 88 88 HOH HOH . K 3 HOH K 25 95 95 HOH HOH . K 3 HOH K 26 98 98 HOH HOH . K 3 HOH K 27 103 103 HOH HOH . K 3 HOH K 28 105 105 HOH HOH . K 3 HOH K 29 114 114 HOH HOH . K 3 HOH K 30 115 115 HOH HOH . K 3 HOH K 31 126 126 HOH HOH . L 3 HOH L 1 9 7 HOH HOH . L 3 HOH L 2 16 16 HOH HOH . L 3 HOH L 3 35 35 HOH HOH . L 3 HOH L 4 38 38 HOH HOH . L 3 HOH L 5 39 39 HOH HOH . L 3 HOH L 6 45 45 HOH HOH . L 3 HOH L 7 48 48 HOH HOH . L 3 HOH L 8 54 54 HOH HOH . L 3 HOH L 9 56 56 HOH HOH . L 3 HOH L 10 67 67 HOH HOH . L 3 HOH L 11 68 68 HOH HOH . L 3 HOH L 12 72 72 HOH HOH . L 3 HOH L 13 74 74 HOH HOH . L 3 HOH L 14 75 75 HOH HOH . L 3 HOH L 15 76 76 HOH HOH . L 3 HOH L 16 86 86 HOH HOH . L 3 HOH L 17 92 92 HOH HOH . L 3 HOH L 18 99 99 HOH HOH . L 3 HOH L 19 107 107 HOH HOH . L 3 HOH L 20 111 111 HOH HOH . L 3 HOH L 21 112 112 HOH HOH . L 3 HOH L 22 116 116 HOH HOH . L 3 HOH L 23 117 117 HOH HOH . L 3 HOH L 24 122 122 HOH HOH . L 3 HOH L 25 123 123 HOH HOH . L 3 HOH L 26 128 128 HOH HOH . L 3 HOH L 27 131 131 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.067 _atom_site.Cartn_y 1.792 _atom_site.Cartn_z 0.699 _atom_site.occupancy 0.83 _atom_site.B_iso_or_equiv 40.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 7 _atom_site.auth_asym_id K _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #