data_3JYA # _model_server_result.job_id 5wk9Sn_VuSJt4WG2gLRODg _model_server_result.datetime_utc '2025-01-03 06:03:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1000}' # _entry.id 3JYA # _exptl.entry_id 3JYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 271.123 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6,9-dichloro[1]benzothieno[3,2-d]pyrimidin-4(3H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3JYA _cell.length_a 96.764 _cell.length_b 96.764 _cell.length_c 80.794 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H4 Cl2 N2 O S' _chem_comp.formula_weight 271.123 _chem_comp.id LWG _chem_comp.mon_nstd_flag . _chem_comp.name 6,9-dichloro[1]benzothieno[3,2-d]pyrimidin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 LWG doub 192 n n C1 C4 LWG sing 193 n n C1 N1 LWG sing 194 n n N1 C2 LWG sing 195 n n N1 HN1 LWG sing 196 n n S1 C4 LWG sing 197 n y S1 C5 LWG sing 198 n y CL1 C6 LWG sing 199 n n C2 N2 LWG doub 200 n n C2 H2 LWG sing 201 n n C3 N2 LWG sing 202 n n C9 CL2 LWG sing 203 n n C4 C3 LWG doub 204 n y C3 C10 LWG sing 205 n y C6 C5 LWG sing 206 n y C5 C10 LWG doub 207 n y C6 C7 LWG doub 208 n y C7 C8 LWG sing 209 n y C7 H7 LWG sing 210 n n C8 C9 LWG doub 211 n y C8 H8 LWG sing 212 n n C10 C9 LWG sing 213 n y # _atom_sites.entry_id 3JYA _atom_sites.fract_transf_matrix[1][1] 0.010334 _atom_sites.fract_transf_matrix[1][2] 0.005967 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id LWG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1000 _pdbx_nonpoly_scheme.auth_seq_num 1000 _pdbx_nonpoly_scheme.pdb_mon_id LWG _pdbx_nonpoly_scheme.auth_mon_id LWG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LWG . . . B 2 9.029 81.36 -1.234 1 32 ? C1 LWG 1000 A 1 HETATM 2 N N1 LWG . . . B 2 9.922 81.314 -0.2 1 31.43 ? N1 LWG 1000 A 1 HETATM 3 O O1 LWG . . . B 2 9.272 81.103 -2.403 1 30.85 ? O1 LWG 1000 A 1 HETATM 4 S S1 LWG . . . B 2 6.406 81.931 -1.74 1 31.72 ? S1 LWG 1000 A 1 HETATM 5 CL CL1 LWG . . . B 2 3.344 82.602 -2.074 1 32.43 ? CL1 LWG 1000 A 1 HETATM 6 C C2 LWG . . . B 2 9.6 81.615 1.101 1 31.26 ? C2 LWG 1000 A 1 HETATM 7 N N2 LWG . . . B 2 8.45 81.985 1.572 1 31.52 ? N2 LWG 1000 A 1 HETATM 8 CL CL2 LWG . . . B 2 6.349 82.848 3.426 1 34.92 ? CL2 LWG 1000 A 1 HETATM 9 C C3 LWG . . . B 2 7.477 82.059 0.57 1 31.42 ? C3 LWG 1000 A 1 HETATM 10 C C4 LWG . . . B 2 7.773 81.758 -0.734 1 32.01 ? C4 LWG 1000 A 1 HETATM 11 C C5 LWG . . . B 2 5.425 82.398 -0.413 1 31.35 ? C5 LWG 1000 A 1 HETATM 12 C C6 LWG . . . B 2 4.092 82.702 -0.517 1 32.04 ? C6 LWG 1000 A 1 HETATM 13 C C7 LWG . . . B 2 3.434 83.062 0.636 1 31.68 ? C7 LWG 1000 A 1 HETATM 14 C C8 LWG . . . B 2 4.107 83.113 1.841 1 31.78 ? C8 LWG 1000 A 1 HETATM 15 C C9 LWG . . . B 2 5.445 82.8 1.938 1 31.1 ? C9 LWG 1000 A 1 HETATM 16 C C10 LWG . . . B 2 6.126 82.431 0.789 1 31.29 ? C10 LWG 1000 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #